RNA–Protein interactions for RNA: ENST00000406293.7

SYNGR1-205, Transcript of synaptogyrin 1, humanhuman

TSL 2 BASIC

Gene SYNGR1, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-205ENST00000406293 TFCP2Q12800 502 aa18.69■□□□□ 0.58
SYNGR1-205ENST00000406293 SKIV2LQ15477 1246 aaKnown RBP18.69■□□□□ 0.58
SYNGR1-205ENST00000406293 NAA16Q6N069 864 aaPredicted RBP18.69■□□□□ 0.58
SYNGR1-205ENST00000406293 CCDC174Q6PII3 467 aa18.69■□□□□ 0.58
SYNGR1-205ENST00000406293 LRFN3Q9BTN0 628 aa18.69■□□□□ 0.58
SYNGR1-205ENST00000406293 MOV10L1Q9BXT6 1211 aaKnown RBP18.69■□□□□ 0.58
SYNGR1-205ENST00000406293 MSRAQ9UJ68 235 aa18.69■□□□□ 0.58
SYNGR1-205ENST00000406293 TCF20Q9UGU0 1960 aaKnown RBP18.68■□□□□ 0.58
SYNGR1-205ENST00000406293 A0A1W2PQ45 241 aaPredicted RBP18.68■□□□□ 0.58
SYNGR1-205ENST00000406293 A0A1W2PQY0 241 aa18.68■□□□□ 0.58
SYNGR1-205ENST00000406293 APBB1O00213 710 aa18.68■□□□□ 0.58
SYNGR1-205ENST00000406293 COBLO75128 1261 aa18.68■□□□□ 0.58
SYNGR1-205ENST00000406293 PLS1Q14651 629 aa18.68■□□□□ 0.58
SYNGR1-205ENST00000406293 IGHA2P01877 340 aa18.67■□□□□ 0.58
SYNGR1-205ENST00000406293 ERCC3P19447 782 aa18.67■□□□□ 0.58
SYNGR1-205ENST00000406293 FAAP100Q0VG06 881 aa18.67■□□□□ 0.58
SYNGR1-205ENST00000406293 PPIGQ13427 754 aaKnown RBP eCLIP18.67■□□□□ 0.58
SYNGR1-205ENST00000406293 LBX2Q6XYB7 198 aa18.67■□□□□ 0.58
SYNGR1-205ENST00000406293 METTL16Q86W50 562 aaKnown RBP18.67■□□□□ 0.58
SYNGR1-205ENST00000406293 NCAPG2Q86XI2 1143 aa18.67■□□□□ 0.58
SYNGR1-205ENST00000406293 ACER1Q8TDN7 264 aa18.67■□□□□ 0.58
SYNGR1-205ENST00000406293 SYNGAP1Q96PV0 1343 aa18.67■□□□□ 0.58
SYNGR1-205ENST00000406293 SIPA1L1O43166 1804 aa18.67■□□□□ 0.58
SYNGR1-205ENST00000406293 TIMP1P01033 207 aa18.66■□□□□ 0.58
SYNGR1-205ENST00000406293 TFF2Q03403 129 aa18.66■□□□□ 0.58
SYNGR1-205ENST00000406293 SPATC1LQ9H0A9 340 aa18.66■□□□□ 0.58
SYNGR1-205ENST00000406293 KIAA1683Q9H0B3 1180 aa18.66■□□□□ 0.58
SYNGR1-205ENST00000406293 NKX2-4Q9H2Z4 354 aa18.66■□□□□ 0.58
SYNGR1-205ENST00000406293 EPHX3Q9H6B9 360 aa18.66■□□□□ 0.58
SYNGR1-205ENST00000406293 COPRSQ9NQ92 184 aa18.66■□□□□ 0.58
SYNGR1-205ENST00000406293 STARD7Q9NQZ5 370 aa18.66■□□□□ 0.58
SYNGR1-205ENST00000406293 CXXC1Q9P0U4 656 aaPredicted RBP18.66■□□□□ 0.58
SYNGR1-205ENST00000406293 PLXNA1Q9UIW2 1896 aa18.65■□□□□ 0.58
SYNGR1-205ENST00000406293 ACRP10323 421 aa18.65■□□□□ 0.58
SYNGR1-205ENST00000406293 BMP1P13497 986 aa18.65■□□□□ 0.58
SYNGR1-205ENST00000406293 RAB30Q15771 203 aa18.65■□□□□ 0.58
SYNGR1-205ENST00000406293 AAK1Q2M2I8 961 aa18.65■□□□□ 0.58
SYNGR1-205ENST00000406293 TMEM31Q5JXX7 168 aa18.65■□□□□ 0.58
SYNGR1-205ENST00000406293 TMEM240Q5SV17 173 aa18.65■□□□□ 0.58
SYNGR1-205ENST00000406293 SAMD1Q6SPF0 538 aaPredicted RBP18.65■□□□□ 0.58
SYNGR1-205ENST00000406293 ALYREFQ86V81 257 aaKnown RBP18.65■□□□□ 0.58
SYNGR1-205ENST00000406293 TANGO6Q9C0B7 1094 aa18.65■□□□□ 0.58
SYNGR1-205ENST00000406293 SLC28A3Q9HAS3 691 aa18.65■□□□□ 0.58
SYNGR1-205ENST00000406293 CABP5Q9NP86 173 aa18.65■□□□□ 0.58
SYNGR1-205ENST00000406293 ARIH1Q9Y4X5 557 aaPredicted RBP18.65■□□□□ 0.58
SYNGR1-205ENST00000406293 ABCB5Q2M3G0 1257 aa18.64■□□□□ 0.57
SYNGR1-205ENST00000406293 MFSD5Q6N075 450 aa18.64■□□□□ 0.57
SYNGR1-205ENST00000406293 MAML3Q96JK9 1138 aa18.64■□□□□ 0.57
SYNGR1-205ENST00000406293 SNRKQ9NRH2 765 aa18.64■□□□□ 0.57
SYNGR1-205ENST00000406293 HOXC10Q9NYD6 342 aa18.64■□□□□ 0.57
SYNGR1-205ENST00000406293 HDAC5Q9UQL6 1122 aa18.64■□□□□ 0.57
SYNGR1-205ENST00000406293 MCAMP43121 646 aa18.63■□□□□ 0.57
SYNGR1-205ENST00000406293 KCNQ1P51787 676 aa18.63■□□□□ 0.57
SYNGR1-205ENST00000406293 COG2Q14746 738 aa18.63■□□□□ 0.57
SYNGR1-205ENST00000406293 CERKLQ49MI3 558 aaPredicted RBP18.63■□□□□ 0.57
SYNGR1-205ENST00000406293 ZNF365Q70YC5 407 aa18.63■□□□□ 0.57
SYNGR1-205ENST00000406293 FAM9BQ8IZU0 186 aa18.63■□□□□ 0.57
SYNGR1-205ENST00000406293 SHCBP1Q8NEM2 672 aa18.63■□□□□ 0.57
SYNGR1-205ENST00000406293 NUP133Q8WUM0 1156 aa18.63■□□□□ 0.57
SYNGR1-205ENST00000406293 SSH1Q8WYL5 1049 aa18.63■□□□□ 0.57
SYNGR1-205ENST00000406293 VTI1AQ96AJ9 217 aa18.63■□□□□ 0.57
SYNGR1-205ENST00000406293 TOX2Q96NM4 488 aa18.63■□□□□ 0.57
SYNGR1-205ENST00000406293 CSF2RAP15509 400 aa18.62■□□□□ 0.57
SYNGR1-205ENST00000406293 USP5P45974 858 aa18.62■□□□□ 0.57
SYNGR1-205ENST00000406293 PPP4CP60510 307 aa18.62■□□□□ 0.57
SYNGR1-205ENST00000406293 C16orf59Q7L2K0 433 aa18.62■□□□□ 0.57
SYNGR1-205ENST00000406293 ANKRD33Q7Z3H0 272 aa18.62■□□□□ 0.57
SYNGR1-205ENST00000406293 TMEM199Q8N511 208 aa18.62■□□□□ 0.57
SYNGR1-205ENST00000406293 LENG1Q96BZ8 264 aaPredicted RBP18.62■□□□□ 0.57
SYNGR1-205ENST00000406293 PPP1R12CQ9BZL4 782 aa18.62■□□□□ 0.57
SYNGR1-205ENST00000406293 MROH8Q9H579 483 aa18.62■□□□□ 0.57
SYNGR1-205ENST00000406293 UQCRFS1P1P0C7P4 283 aa18.61■□□□□ 0.57
SYNGR1-205ENST00000406293 FCER1AP12319 257 aa18.61■□□□□ 0.57
SYNGR1-205ENST00000406293 ARID4AP29374 1257 aaPredicted RBP18.61■□□□□ 0.57
SYNGR1-205ENST00000406293 DYNLL1P63167 89 aaKnown RBP18.61■□□□□ 0.57
SYNGR1-205ENST00000406293 PSRC1Q6PGN9 363 aaPredicted RBP18.61■□□□□ 0.57
SYNGR1-205ENST00000406293 CCER2I3L3R5 266 aa18.6■□□□□ 0.57
SYNGR1-205ENST00000406293 AKR1A1P14550 325 aa18.6■□□□□ 0.57
SYNGR1-205ENST00000406293 TAL1P17542 331 aaPredicted RBP18.6■□□□□ 0.57
SYNGR1-205ENST00000406293 ACLYP53396 1101 aa18.6■□□□□ 0.57
SYNGR1-205ENST00000406293 TATDN1Q6P1N9 297 aa18.6■□□□□ 0.57
SYNGR1-205ENST00000406293 ADGRA1Q86SQ6 560 aa18.6■□□□□ 0.57
SYNGR1-205ENST00000406293 CDCA7LQ96GN5 454 aa18.6■□□□□ 0.57
SYNGR1-205ENST00000406293 MTIF3Q9H2K0 278 aaKnown RBP18.6■□□□□ 0.57
SYNGR1-205ENST00000406293 SERPINB13Q9UIV8 391 aa18.6■□□□□ 0.57
SYNGR1-205ENST00000406293 TBX21Q9UL17 535 aa18.6■□□□□ 0.57
SYNGR1-205ENST00000406293 SMCHD1A6NHR9 2005 aa18.6■□□□□ 0.57
SYNGR1-205ENST00000406293 FAM86C2PA6NEL3 165 aa18.59■□□□□ 0.57
SYNGR1-205ENST00000406293 ABRAQ8N0Z2 381 aa18.59■□□□□ 0.57
SYNGR1-205ENST00000406293 MMP19Q99542 508 aa18.59■□□□□ 0.57
SYNGR1-205ENST00000406293 TSEN34Q9BSV6 310 aaKnown RBP18.59■□□□□ 0.57
SYNGR1-205ENST00000406293 NRBP1Q9UHY1 535 aa18.59■□□□□ 0.57
SYNGR1-205ENST00000406293 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.59■□□□□ 0.57
SYNGR1-205ENST00000406293 ZNF236Q9UL36 1845 aa18.58■□□□□ 0.57
SYNGR1-205ENST00000406293 MROH7Q68CQ1 1323 aa18.58■□□□□ 0.57
SYNGR1-205ENST00000406293 MPHOSPH10O00566 681 aaKnown RBP18.58■□□□□ 0.56
SYNGR1-205ENST00000406293 SRGAP3O43295 1099 aa18.58■□□□□ 0.56
SYNGR1-205ENST00000406293 PGK2P07205 417 aa18.58■□□□□ 0.56
SYNGR1-205ENST00000406293 TTC39AQ5SRH9 613 aa18.58■□□□□ 0.56
SYNGR1-205ENST00000406293 RASIP1Q5U651 963 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms