RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 NOL10Q9BSC4 688 aaKnown RBP14.59□□□□□ -0.07
SPTLC1P3-201ENST00000403408 CWC22Q9HCG8 908 aaKnown RBP14.59□□□□□ -0.07
SPTLC1P3-201ENST00000403408 PRKAG2Q9UGJ0 569 aa14.59□□□□□ -0.07
SPTLC1P3-201ENST00000403408 FPGT-TNNI3KV9GXZ4 949 aa14.59□□□□□ -0.07
SPTLC1P3-201ENST00000403408 TRANK1O15050 2925 aa14.59□□□□□ -0.07
SPTLC1P3-201ENST00000403408 GLRX3O76003 335 aaKnown RBP14.58□□□□□ -0.08
SPTLC1P3-201ENST00000403408 HLA-DOAP06340 250 aa14.58□□□□□ -0.08
SPTLC1P3-201ENST00000403408 GNAI3P08754 354 aa14.58□□□□□ -0.08
SPTLC1P3-201ENST00000403408 CYP7A1P22680 504 aa14.58□□□□□ -0.08
SPTLC1P3-201ENST00000403408 TRIM34Q9BYJ4 488 aa14.58□□□□□ -0.08
SPTLC1P3-201ENST00000403408 HDAC5Q9UQL6 1122 aa14.58□□□□□ -0.08
SPTLC1P3-201ENST00000403408 SEPT4O43236 478 aa14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 ERCC3P19447 782 aa14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 G3BP1Q13283 466 aaKnown RBP eCLIP14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 POLA2Q14181 598 aa14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 SEPT2Q15019 361 aa14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 ABCB5Q2M3G0 1257 aa14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 CERKLQ49MI3 558 aaPredicted RBP14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 TTC39AQ5SRH9 613 aa14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 C1orf53Q5VUE5 145 aa14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 ARRDC4Q8NCT1 418 aa14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 EHD4Q9H223 541 aa14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 ANTXR1Q9H6X2 564 aa14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 SERPINB13Q9UIV8 391 aa14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 DBNLQ9UJU6 430 aaKnown RBP14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 IVNS1ABPQ9Y6Y0 642 aa14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 PARP14Q460N5 1801 aa14.57□□□□□ -0.08
SPTLC1P3-201ENST00000403408 KBTBD13C9JR72 458 aa14.56□□□□□ -0.08
SPTLC1P3-201ENST00000403408 MYCNP04198 464 aaPredicted RBP14.56□□□□□ -0.08
SPTLC1P3-201ENST00000403408 TAL1P17542 331 aaPredicted RBP14.56□□□□□ -0.08
SPTLC1P3-201ENST00000403408 GABPAQ06546 454 aa14.56□□□□□ -0.08
SPTLC1P3-201ENST00000403408 DPP9Q86TI2 863 aa14.56□□□□□ -0.08
SPTLC1P3-201ENST00000403408 SIAH1Q8IUQ4 282 aa14.56□□□□□ -0.08
SPTLC1P3-201ENST00000403408 ZNF512BQ96KM6 892 aaPredicted RBP14.56□□□□□ -0.08
SPTLC1P3-201ENST00000403408 SPATC1LQ9H0A9 340 aa14.56□□□□□ -0.08
SPTLC1P3-201ENST00000403408 GPR108Q9NPR9 543 aa14.56□□□□□ -0.08
SPTLC1P3-201ENST00000403408 PHF24Q9UPV7 400 aa14.56□□□□□ -0.08
SPTLC1P3-201ENST00000403408 GNAI2P04899 355 aa14.55□□□□□ -0.08
SPTLC1P3-201ENST00000403408 TRIM27P14373 513 aa14.55□□□□□ -0.08
SPTLC1P3-201ENST00000403408 COL9A1P20849 921 aa14.55□□□□□ -0.08
SPTLC1P3-201ENST00000403408 USP14P54578 494 aa14.55□□□□□ -0.08
SPTLC1P3-201ENST00000403408 CLEC10AQ8IUN9 316 aa14.55□□□□□ -0.08
SPTLC1P3-201ENST00000403408 ARHGAP45Q92619 1136 aa14.55□□□□□ -0.08
SPTLC1P3-201ENST00000403408 LENG1Q96BZ8 264 aaPredicted RBP14.55□□□□□ -0.08
SPTLC1P3-201ENST00000403408 RIOK1Q9BRS2 568 aaKnown RBP14.55□□□□□ -0.08
SPTLC1P3-201ENST00000403408 COL11A1P12107 1806 aaPredicted RBP14.55□□□□□ -0.08
SPTLC1P3-201ENST00000403408 SMIM22K7EJ46 135 aa14.54□□□□□ -0.08
SPTLC1P3-201ENST00000403408 KIAA0355O15063 1070 aa14.54□□□□□ -0.08
SPTLC1P3-201ENST00000403408 PGK1P00558 417 aa14.54□□□□□ -0.08
SPTLC1P3-201ENST00000403408 CT47B1P0C2W7 299 aaPredicted RBP14.54□□□□□ -0.08
SPTLC1P3-201ENST00000403408 USP5P45974 858 aa14.54□□□□□ -0.08
SPTLC1P3-201ENST00000403408 MAGEB6Q8N7X4 407 aa14.54□□□□□ -0.08
SPTLC1P3-201ENST00000403408 EAF2Q96CJ1 260 aaPredicted RBP14.54□□□□□ -0.08
SPTLC1P3-201ENST00000403408 MAML3Q96JK9 1138 aa14.54□□□□□ -0.08
SPTLC1P3-201ENST00000403408 RNPC3Q96LT9 517 aaKnown RBP14.54□□□□□ -0.08
SPTLC1P3-201ENST00000403408 CCDC8Q9H0W5 538 aaPredicted RBP14.54□□□□□ -0.08
SPTLC1P3-201ENST00000403408 STRNO43815 780 aa14.53□□□□□ -0.08
SPTLC1P3-201ENST00000403408 IDH1O75874 414 aaKnown RBP14.53□□□□□ -0.08
SPTLC1P3-201ENST00000403408 CYP2D6P10635 497 aa14.53□□□□□ -0.08
SPTLC1P3-201ENST00000403408 DNAJB2P25686 324 aa14.53□□□□□ -0.08
SPTLC1P3-201ENST00000403408 DSG3P32926 999 aa14.53□□□□□ -0.08
SPTLC1P3-201ENST00000403408 IRX5P78411 483 aaPredicted RBP14.53□□□□□ -0.08
SPTLC1P3-201ENST00000403408 COG2Q14746 738 aa14.53□□□□□ -0.08
SPTLC1P3-201ENST00000403408 TJAP1Q5JTD0 557 aa14.53□□□□□ -0.08
SPTLC1P3-201ENST00000403408 CCDC158Q5M9N0 1113 aa14.53□□□□□ -0.08
SPTLC1P3-201ENST00000403408 ATF7IPQ6VMQ6 1270 aa14.53□□□□□ -0.08
SPTLC1P3-201ENST00000403408 C16orf59Q7L2K0 433 aa14.53□□□□□ -0.08
SPTLC1P3-201ENST00000403408 SLC44A5Q8NCS7 719 aa14.53□□□□□ -0.08
SPTLC1P3-201ENST00000403408 SHCBP1Q8NEM2 672 aa14.53□□□□□ -0.08
SPTLC1P3-201ENST00000403408 SSH3Q8TE77 659 aa14.53□□□□□ -0.08
SPTLC1P3-201ENST00000403408 ATG4CQ96DT6 458 aa14.53□□□□□ -0.08
SPTLC1P3-201ENST00000403408 NAV1Q8NEY1 1877 aa14.52□□□□□ -0.08
SPTLC1P3-201ENST00000403408 PLXNA1Q9UIW2 1896 aa14.52□□□□□ -0.08
SPTLC1P3-201ENST00000403408 TMEM265A0A087WTH1 108 aa14.52□□□□□ -0.09
SPTLC1P3-201ENST00000403408 GRXCR1A8MXD5 290 aa14.52□□□□□ -0.09
SPTLC1P3-201ENST00000403408 BCAR3O75815 825 aa14.52□□□□□ -0.09
SPTLC1P3-201ENST00000403408 CLTBP09497 229 aa14.52□□□□□ -0.09
SPTLC1P3-201ENST00000403408 FAAP100Q0VG06 881 aa14.52□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TACC3Q9Y6A5 838 aa14.52□□□□□ -0.09
SPTLC1P3-201ENST00000403408 A0A1W2PQ45 241 aaPredicted RBP14.51□□□□□ -0.09
SPTLC1P3-201ENST00000403408 A0A1W2PQY0 241 aa14.51□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TNFRSF10AO00220 468 aa14.51□□□□□ -0.09
SPTLC1P3-201ENST00000403408 PQBP1O60828 265 aaKnown RBP14.51□□□□□ -0.09
SPTLC1P3-201ENST00000403408 PGK2P07205 417 aa14.51□□□□□ -0.09
SPTLC1P3-201ENST00000403408 ZNF865P0CJ78 1059 aaPredicted RBP14.51□□□□□ -0.09
SPTLC1P3-201ENST00000403408 PBX2P40425 430 aa14.51□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TMEM132BQ14DG7 1078 aa14.51□□□□□ -0.09
SPTLC1P3-201ENST00000403408 SYMPKQ92797 1274 aaKnown RBP14.51□□□□□ -0.09
SPTLC1P3-201ENST00000403408 CLUAP1Q96AJ1 413 aa14.51□□□□□ -0.09
SPTLC1P3-201ENST00000403408 ZNF576Q9H609 170 aa14.51□□□□□ -0.09
SPTLC1P3-201ENST00000403408 C1orf115Q9H7X2 142 aa14.51□□□□□ -0.09
SPTLC1P3-201ENST00000403408 CABP5Q9NP86 173 aa14.51□□□□□ -0.09
SPTLC1P3-201ENST00000403408 XPNPEP3Q9NQH7 507 aa14.51□□□□□ -0.09
SPTLC1P3-201ENST00000403408 HOXC10Q9NYD6 342 aa14.51□□□□□ -0.09
SPTLC1P3-201ENST00000403408 ADAMTS4O75173 837 aa14.5□□□□□ -0.09
SPTLC1P3-201ENST00000403408 ATP8B2P98198 1209 aa14.5□□□□□ -0.09
SPTLC1P3-201ENST00000403408 ADGRE1Q14246 886 aa14.5□□□□□ -0.09
SPTLC1P3-201ENST00000403408 TTC6Q86TZ1 520 aa14.5□□□□□ -0.09
SPTLC1P3-201ENST00000403408 NCAPG2Q86XI2 1143 aa14.5□□□□□ -0.09
SPTLC1P3-201ENST00000403408 ABRAQ8N0Z2 381 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms