RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 RNF208Q9H0X6 261 aa18.98■□□□□ 0.63
ATG4B-203ENST00000400772 BTBD7Q9P203 1132 aa18.98■□□□□ 0.63
ATG4B-203ENST00000400772 FOXP2O15409 715 aa18.97■□□□□ 0.63
ATG4B-203ENST00000400772 APPP05067 770 aa18.97■□□□□ 0.63
ATG4B-203ENST00000400772 GJB1P08034 283 aa18.97■□□□□ 0.63
ATG4B-203ENST00000400772 EEF2P13639 858 aaKnown RBP18.97■□□□□ 0.63
ATG4B-203ENST00000400772 TDO2P48775 406 aa18.97■□□□□ 0.63
ATG4B-203ENST00000400772 GPR142Q7Z601 462 aa18.97■□□□□ 0.63
ATG4B-203ENST00000400772 VCPKMTQ9H867 229 aa18.97■□□□□ 0.63
ATG4B-203ENST00000400772 KANSL2Q9H9L4 492 aa18.97■□□□□ 0.63
ATG4B-203ENST00000400772 ARHGEF10LQ9HCE6 1279 aa18.97■□□□□ 0.63
ATG4B-203ENST00000400772 PDE4DIPQ5VU43 2346 aa18.97■□□□□ 0.63
ATG4B-203ENST00000400772 MAPK4P31152 587 aa18.96■□□□□ 0.63
ATG4B-203ENST00000400772 GJA8P48165 433 aa18.96■□□□□ 0.63
ATG4B-203ENST00000400772 NUCB1Q02818 461 aa18.96■□□□□ 0.63
ATG4B-203ENST00000400772 COG2Q14746 738 aa18.96■□□□□ 0.63
ATG4B-203ENST00000400772 CCDC129Q6ZRS4 1044 aa18.96■□□□□ 0.63
ATG4B-203ENST00000400772 SPICE1Q8N0Z3 855 aa18.96■□□□□ 0.63
ATG4B-203ENST00000400772 USP6NLQ92738 828 aa18.96■□□□□ 0.63
ATG4B-203ENST00000400772 CYP2B6P20813 491 aa18.95■□□□□ 0.62
ATG4B-203ENST00000400772 TRIM32Q13049 653 aa18.95■□□□□ 0.62
ATG4B-203ENST00000400772 MORN1Q5T089 497 aa18.95■□□□□ 0.62
ATG4B-203ENST00000400772 PLEKHH3Q7Z736 793 aa18.95■□□□□ 0.62
ATG4B-203ENST00000400772 CHD1LQ86WJ1 897 aa18.95■□□□□ 0.62
ATG4B-203ENST00000400772 LPAR1Q92633 364 aa18.95■□□□□ 0.62
ATG4B-203ENST00000400772 NUDT12Q9BQG2 462 aa18.95■□□□□ 0.62
ATG4B-203ENST00000400772 MKNK2Q9HBH9 465 aa18.95■□□□□ 0.62
ATG4B-203ENST00000400772 HOXC10Q9NYD6 342 aa18.95■□□□□ 0.62
ATG4B-203ENST00000400772 RLFQ13129 1914 aa18.94■□□□□ 0.62
ATG4B-203ENST00000400772 PRDM1O75626 825 aa18.94■□□□□ 0.62
ATG4B-203ENST00000400772 PLEKHM2Q8IWE5 1019 aa18.94■□□□□ 0.62
ATG4B-203ENST00000400772 NKX2-3Q8TAU0 364 aa18.94■□□□□ 0.62
ATG4B-203ENST00000400772 U2AF1L4Q8WU68 220 aaKnown RBP18.94■□□□□ 0.62
ATG4B-203ENST00000400772 TRIB2Q92519 343 aa18.94■□□□□ 0.62
ATG4B-203ENST00000400772 NACAP1Q9BZK3 213 aa18.94■□□□□ 0.62
ATG4B-203ENST00000400772 TANGO6Q9C0B7 1094 aa18.94■□□□□ 0.62
ATG4B-203ENST00000400772 SH2D4AQ9H788 454 aa18.94■□□□□ 0.62
ATG4B-203ENST00000400772 GREB1LQ9C091 1923 aaPredicted RBP18.94■□□□□ 0.62
ATG4B-203ENST00000400772 IGKV6D-41A0A0C4DH26 115 aa18.93■□□□□ 0.62
ATG4B-203ENST00000400772 SGPL1O95470 568 aa18.93■□□□□ 0.62
ATG4B-203ENST00000400772 HMGCRP04035 888 aa18.93■□□□□ 0.62
ATG4B-203ENST00000400772 XRCC5P13010 732 aaKnown RBP18.93■□□□□ 0.62
ATG4B-203ENST00000400772 DSG3P32926 999 aa18.93■□□□□ 0.62
ATG4B-203ENST00000400772 ATP2B2Q01814 1243 aa18.93■□□□□ 0.62
ATG4B-203ENST00000400772 SOCS4Q8WXH5 440 aa18.93■□□□□ 0.62
ATG4B-203ENST00000400772 PAK6Q9NQU5 681 aaPredicted RBP18.93■□□□□ 0.62
ATG4B-203ENST00000400772 WDR46O15213 610 aaKnown RBP18.92■□□□□ 0.62
ATG4B-203ENST00000400772 CCNA1P78396 465 aa18.92■□□□□ 0.62
ATG4B-203ENST00000400772 PPARAQ07869 468 aa18.92■□□□□ 0.62
ATG4B-203ENST00000400772 VPS53Q5VIR6 699 aa18.92■□□□□ 0.62
ATG4B-203ENST00000400772 PRPF38BQ5VTL8 546 aaKnown RBP18.92■□□□□ 0.62
ATG4B-203ENST00000400772 UBE2Q1Q7Z7E8 422 aa18.92■□□□□ 0.62
ATG4B-203ENST00000400772 CCAR1Q8IX12 1150 aaKnown RBP18.92■□□□□ 0.62
ATG4B-203ENST00000400772 FAM227BQ96M60 508 aa18.92■□□□□ 0.62
ATG4B-203ENST00000400772 NAPBQ9H115 298 aa18.92■□□□□ 0.62
ATG4B-203ENST00000400772 OSBPL3Q9H4L5 887 aa18.92■□□□□ 0.62
ATG4B-203ENST00000400772 HELLSQ9NRZ9 838 aa18.92■□□□□ 0.62
ATG4B-203ENST00000400772 FLOT1O75955 427 aa18.91■□□□□ 0.62
ATG4B-203ENST00000400772 CCL14Q16627 93 aa18.91■□□□□ 0.62
ATG4B-203ENST00000400772 ZNF444Q8N0Y2 327 aaPredicted RBP18.91■□□□□ 0.62
ATG4B-203ENST00000400772 NYAP2Q9P242 653 aa18.91■□□□□ 0.62
ATG4B-203ENST00000400772 ADAMTS5Q9UNA0 930 aa18.91■□□□□ 0.62
ATG4B-203ENST00000400772 A0A0D9SFI3 127 aa18.9■□□□□ 0.62
ATG4B-203ENST00000400772 PTPREP23469 700 aa18.9■□□□□ 0.62
ATG4B-203ENST00000400772 RGS2P41220 211 aa18.9■□□□□ 0.62
ATG4B-203ENST00000400772 MAP3K21Q5TCX8 1036 aa18.9■□□□□ 0.62
ATG4B-203ENST00000400772 TICAM2Q86XR7 235 aa18.9■□□□□ 0.62
ATG4B-203ENST00000400772 ATG4CQ96DT6 458 aa18.9■□□□□ 0.62
ATG4B-203ENST00000400772 DEFB118Q96PH6 123 aa18.9■□□□□ 0.62
ATG4B-203ENST00000400772 MOV10L1Q9BXT6 1211 aaKnown RBP18.9■□□□□ 0.62
ATG4B-203ENST00000400772 SPATC1LQ9H0A9 340 aa18.9■□□□□ 0.62
ATG4B-203ENST00000400772 ZNF287Q9HBT7 754 aa18.9■□□□□ 0.62
ATG4B-203ENST00000400772 GOPCQ9HD26 462 aa18.9■□□□□ 0.62
ATG4B-203ENST00000400772 INCENPQ9NQS7 918 aa18.9■□□□□ 0.62
ATG4B-203ENST00000400772 FBXO28Q9NVF7 368 aa18.9■□□□□ 0.62
ATG4B-203ENST00000400772 TACC3Q9Y6A5 838 aa18.9■□□□□ 0.62
ATG4B-203ENST00000400772 SLC15A5A6NIM6 579 aa18.89■□□□□ 0.61
ATG4B-203ENST00000400772 TRIM6-TRIM34B2RNG4 842 aa18.89■□□□□ 0.61
ATG4B-203ENST00000400772 IRX6P78412 446 aaPredicted RBP18.89■□□□□ 0.61
ATG4B-203ENST00000400772 MAP2K5Q13163 448 aa18.89■□□□□ 0.61
ATG4B-203ENST00000400772 MCMDC2Q4G0Z9 681 aa18.89■□□□□ 0.61
ATG4B-203ENST00000400772 FAM47AQ5JRC9 791 aa18.89■□□□□ 0.61
ATG4B-203ENST00000400772 WDR78Q5VTH9 848 aa18.89■□□□□ 0.61
ATG4B-203ENST00000400772 MB21D1Q8N884 522 aa18.89■□□□□ 0.61
ATG4B-203ENST00000400772 MKL1Q969V6 931 aa18.89■□□□□ 0.61
ATG4B-203ENST00000400772 CEP95Q96GE4 821 aa18.89■□□□□ 0.61
ATG4B-203ENST00000400772 CRISPLD2Q9H0B8 497 aa18.89■□□□□ 0.61
ATG4B-203ENST00000400772 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.89■□□□□ 0.612e-7■■■□□ 19.1
ATG4B-203ENST00000400772 CLIP2Q9UDT6 1046 aa18.89■□□□□ 0.61
ATG4B-203ENST00000400772 RPTORQ8N122 1335 aa18.89■□□□□ 0.61
ATG4B-203ENST00000400772 A0A0G2JMZ2 1700 aa18.88■□□□□ 0.61
ATG4B-203ENST00000400772 F5H6K3 240 aa18.88■□□□□ 0.61
ATG4B-203ENST00000400772 CTDSPL2Q05D32 466 aa18.88■□□□□ 0.61
ATG4B-203ENST00000400772 PDE4BQ07343 736 aa18.88■□□□□ 0.61
ATG4B-203ENST00000400772 KLRC3Q07444 240 aa18.88■□□□□ 0.61
ATG4B-203ENST00000400772 NMIQ13287 307 aaPredicted RBP18.88■□□□□ 0.61
ATG4B-203ENST00000400772 GRB14Q14449 540 aa18.88■□□□□ 0.61
ATG4B-203ENST00000400772 ALX1Q15699 326 aa18.88■□□□□ 0.61
ATG4B-203ENST00000400772 FAM83BQ5T0W9 1011 aa18.88■□□□□ 0.61
ATG4B-203ENST00000400772 ZNF589Q86UQ0 364 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms