RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 TICAM2Q86XR7 235 aa18.46■□□□□ 0.55
ATG4B-202ENST00000400771 STK11IPQ8N1F8 1099 aa18.46■□□□□ 0.55
ATG4B-202ENST00000400771 HELLSQ9NRZ9 838 aa18.46■□□□□ 0.55
ATG4B-202ENST00000400771 ALPK3Q96L96 1907 aa18.46■□□□□ 0.55
ATG4B-202ENST00000400771 PRDM1O75626 825 aa18.45■□□□□ 0.54
ATG4B-202ENST00000400771 EEF2P13639 858 aaKnown RBP18.45■□□□□ 0.54
ATG4B-202ENST00000400771 HOXD10P28358 340 aa18.45■□□□□ 0.54
ATG4B-202ENST00000400771 MLLT1Q03111 559 aaPredicted RBP18.45■□□□□ 0.54
ATG4B-202ENST00000400771 PPARAQ07869 468 aa18.45■□□□□ 0.54
ATG4B-202ENST00000400771 IRF5Q13568 498 aa18.45■□□□□ 0.54
ATG4B-202ENST00000400771 Q3C1V9 767 aa18.45■□□□□ 0.54
ATG4B-202ENST00000400771 GTF3C2Q8WUA4 911 aaPredicted RBP18.45■□□□□ 0.54
ATG4B-202ENST00000400771 PORCNQ9H237 461 aa18.45■□□□□ 0.54
ATG4B-202ENST00000400771 VCPKMTQ9H867 229 aa18.45■□□□□ 0.54
ATG4B-202ENST00000400771 ARHGEF10LQ9HCE6 1279 aa18.45■□□□□ 0.54
ATG4B-202ENST00000400771 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.45■□□□□ 0.54
ATG4B-202ENST00000400771 ZMYM6O95789 1325 aa18.45■□□□□ 0.54
ATG4B-202ENST00000400771 APPP05067 770 aa18.44■□□□□ 0.54
ATG4B-202ENST00000400771 GRK4P32298 578 aa18.44■□□□□ 0.54
ATG4B-202ENST00000400771 RAET1EQ8TD07 263 aa18.44■□□□□ 0.54
ATG4B-202ENST00000400771 PAGR1Q9BTK6 254 aa18.44■□□□□ 0.54
ATG4B-202ENST00000400771 NAPBQ9H115 298 aa18.44■□□□□ 0.54
ATG4B-202ENST00000400771 BTBD7Q9P203 1132 aa18.44■□□□□ 0.54
ATG4B-202ENST00000400771 GJD2Q9UKL4 321 aa18.44■□□□□ 0.54
ATG4B-202ENST00000400771 TRIM6-TRIM34B2RNG4 842 aa18.43■□□□□ 0.54
ATG4B-202ENST00000400771 GSPT1P15170 499 aaKnown RBP18.43■□□□□ 0.54
ATG4B-202ENST00000400771 MTFR1Q15390 333 aa18.43■□□□□ 0.54
ATG4B-202ENST00000400771 SPICE1Q8N0Z3 855 aa18.43■□□□□ 0.54
ATG4B-202ENST00000400771 SLAIN1Q8ND83 568 aa18.43■□□□□ 0.54
ATG4B-202ENST00000400771 LPAR1Q92633 364 aa18.43■□□□□ 0.54
ATG4B-202ENST00000400771 NACAP1Q9BZK3 213 aa18.43■□□□□ 0.54
ATG4B-202ENST00000400771 KANSL2Q9H9L4 492 aa18.43■□□□□ 0.54
ATG4B-202ENST00000400771 RABGAP1Q9Y3P9 1069 aa18.43■□□□□ 0.54
ATG4B-202ENST00000400771 CCDC171Q6TFL3 1326 aa18.43■□□□□ 0.54
ATG4B-202ENST00000400771 ELNP15502 786 aa18.42■□□□□ 0.54
ATG4B-202ENST00000400771 SDSP20132 328 aa18.42■□□□□ 0.54
ATG4B-202ENST00000400771 ALX1Q15699 326 aa18.42■□□□□ 0.54
ATG4B-202ENST00000400771 MCMDC2Q4G0Z9 681 aa18.42■□□□□ 0.54
ATG4B-202ENST00000400771 GPRC5AQ8NFJ5 357 aa18.42■□□□□ 0.54
ATG4B-202ENST00000400771 RILPL2Q969X0 211 aa18.42■□□□□ 0.54
ATG4B-202ENST00000400771 SHISA4Q96DD7 197 aa18.42■□□□□ 0.54
ATG4B-202ENST00000400771 SH2D4AQ9H788 454 aa18.42■□□□□ 0.54
ATG4B-202ENST00000400771 WDR46O15213 610 aaKnown RBP18.41■□□□□ 0.54
ATG4B-202ENST00000400771 ADCY3O60266 1144 aa18.41■□□□□ 0.54
ATG4B-202ENST00000400771 NBPF11Q86T75 865 aa18.41■□□□□ 0.54
ATG4B-202ENST00000400771 PXYLP1Q8TE99 480 aa18.41■□□□□ 0.54
ATG4B-202ENST00000400771 USP6NLQ92738 828 aa18.41■□□□□ 0.54
ATG4B-202ENST00000400771 COA7Q96BR5 231 aa18.41■□□□□ 0.54
ATG4B-202ENST00000400771 TANGO6Q9C0B7 1094 aa18.41■□□□□ 0.54
ATG4B-202ENST00000400771 NBPF3Q9H094 633 aa18.41■□□□□ 0.54
ATG4B-202ENST00000400771 IL25Q9H293 177 aa18.41■□□□□ 0.54
ATG4B-202ENST00000400771 MKNK2Q9HBH9 465 aa18.41■□□□□ 0.54
ATG4B-202ENST00000400771 NYAP2Q9P242 653 aa18.41■□□□□ 0.54
ATG4B-202ENST00000400771 ANAPC4Q9UJX5 808 aa18.41■□□□□ 0.54
ATG4B-202ENST00000400771 CEP290O15078 2479 aa18.41■□□□□ 0.54
ATG4B-202ENST00000400771 LCTP09848 1927 aa18.41■□□□□ 0.54
ATG4B-202ENST00000400771 MYCP01106 439 aaPredicted RBP18.4■□□□□ 0.54
ATG4B-202ENST00000400771 HSPD1P10809 573 aaKnown RBP18.4■□□□□ 0.54
ATG4B-202ENST00000400771 EN2P19622 333 aaPredicted RBP18.4■□□□□ 0.54
ATG4B-202ENST00000400771 CTDSPL2Q05D32 466 aa18.4■□□□□ 0.54
ATG4B-202ENST00000400771 TTC22Q5TAA0 569 aa18.4■□□□□ 0.54
ATG4B-202ENST00000400771 GPR142Q7Z601 462 aa18.4■□□□□ 0.54
ATG4B-202ENST00000400771 CEP95Q96GE4 821 aa18.4■□□□□ 0.54
ATG4B-202ENST00000400771 SMCHD1A6NHR9 2005 aa18.4■□□□□ 0.54
ATG4B-202ENST00000400771 INHAP05111 366 aa18.39■□□□□ 0.53
ATG4B-202ENST00000400771 FGRP09769 529 aa18.39■□□□□ 0.53
ATG4B-202ENST00000400771 MAPK4P31152 587 aa18.39■□□□□ 0.53
ATG4B-202ENST00000400771 DSG3P32926 999 aa18.39■□□□□ 0.53
ATG4B-202ENST00000400771 MORN1Q5T089 497 aa18.39■□□□□ 0.53
ATG4B-202ENST00000400771 NEDD1Q8NHV4 660 aa18.39■□□□□ 0.53
ATG4B-202ENST00000400771 TRIB2Q92519 343 aa18.39■□□□□ 0.53
ATG4B-202ENST00000400771 ATG4CQ96DT6 458 aa18.39■□□□□ 0.53
ATG4B-202ENST00000400771 INCENPQ9NQS7 918 aa18.39■□□□□ 0.53
ATG4B-202ENST00000400771 MTMR4Q9NYA4 1195 aa18.39■□□□□ 0.53
ATG4B-202ENST00000400771 FGAP02671 866 aa18.38■□□□□ 0.53
ATG4B-202ENST00000400771 CCL5P13501 91 aa18.38■□□□□ 0.53
ATG4B-202ENST00000400771 ATP2B2Q01814 1243 aa18.38■□□□□ 0.53
ATG4B-202ENST00000400771 COG2Q14746 738 aa18.38■□□□□ 0.53
ATG4B-202ENST00000400771 FAM47AQ5JRC9 791 aa18.38■□□□□ 0.53
ATG4B-202ENST00000400771 NKX2-3Q8TAU0 364 aa18.38■□□□□ 0.53
ATG4B-202ENST00000400771 FBXO28Q9NVF7 368 aa18.38■□□□□ 0.53
ATG4B-202ENST00000400771 MCM3APO60318 1980 aa18.38■□□□□ 0.53
ATG4B-202ENST00000400771 ORC4O43929 436 aa18.37■□□□□ 0.53
ATG4B-202ENST00000400771 FLOT1O75955 427 aa18.37■□□□□ 0.53
ATG4B-202ENST00000400771 NDUFB10O96000 172 aa18.37■□□□□ 0.53
ATG4B-202ENST00000400771 PDE4BQ07343 736 aa18.37■□□□□ 0.53
ATG4B-202ENST00000400771 FAM83BQ5T0W9 1011 aa18.37■□□□□ 0.53
ATG4B-202ENST00000400771 REPS2Q8NFH8 660 aa18.37■□□□□ 0.53
ATG4B-202ENST00000400771 SOCS4Q8WXH5 440 aa18.37■□□□□ 0.53
ATG4B-202ENST00000400771 NUP88Q99567 741 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-202ENST00000400771 UNC93B1Q9H1C4 597 aa18.37■□□□□ 0.53
ATG4B-202ENST00000400771 ZNF287Q9HBT7 754 aa18.37■□□□□ 0.53
ATG4B-202ENST00000400771 GOPCQ9HD26 462 aa18.37■□□□□ 0.53
ATG4B-202ENST00000400771 ADAMTS5Q9UNA0 930 aa18.37■□□□□ 0.53
ATG4B-202ENST00000400771 LRRC37A2A6NM11 1700 aa18.37■□□□□ 0.53
ATG4B-202ENST00000400771 TRIM32Q13049 653 aa18.36■□□□□ 0.53
ATG4B-202ENST00000400771 PLEKHH3Q7Z736 793 aa18.36■□□□□ 0.53
ATG4B-202ENST00000400771 TBC1D10CQ8IV04 446 aa18.36■□□□□ 0.53
ATG4B-202ENST00000400771 LRRC47Q8N1G4 583 aaKnown RBP18.36■□□□□ 0.53
ATG4B-202ENST00000400771 MKL1Q969V6 931 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms