RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 HIP1RO75146 1068 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 ADGRL2O95490 1459 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 ZNF853P0CG23 659 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 RBL2Q08999 1139 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 DPCR1Q3MIW9 517 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 RPUSD2Q8IZ73 545 aaKnown RBP9.56□□□□□ -0.88
CTNND1-205ENST00000399050 SNX29Q8TEQ0 813 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 KLHL14Q9P2G3 628 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 CASQ2O14958 399 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-205ENST00000399050 TBC1D8O95759 1140 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 CASP14P31944 242 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 PUM3Q15397 648 aaKnown RBP9.56□□□□□ -0.88
CTNND1-205ENST00000399050 WDR78Q5VTH9 848 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 GPCPD1Q9NPB8 672 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 SYNMO15061 1565 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 MAGI2Q86UL8 1455 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 A0A087WUV0 522 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-205ENST00000399050 ZMYND10O75800 440 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 TCP1P17987 556 aaKnown RBP9.56□□□□□ -0.88
CTNND1-205ENST00000399050 ZAP70P43403 619 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 DNM2P50570 870 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 CCDC14Q49A88 953 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 WDR44Q5JSH3 913 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 MSANTD4Q8NCY6 345 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 RTEL1Q9NZ71 1219 aa9.56□□□□□ -0.88
CTNND1-205ENST00000399050 FAM170AA1A519 330 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 IRX5P78411 483 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-205ENST00000399050 APBA1Q02410 837 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 CALCRLQ16602 461 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 LIN9Q5TKA1 542 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 AP1ARQ63HQ0 302 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 RASEFQ8IZ41 740 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 LRWD1Q9UFC0 647 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 ZNF532Q9HCE3 1301 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 I3L4J1 428 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 LUC7L3O95232 432 aaKnown RBP9.55□□□□□ -0.88
CTNND1-205ENST00000399050 LDHBP07195 334 aaKnown RBP9.55□□□□□ -0.88
CTNND1-205ENST00000399050 PNMA6AP0CW24 399 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-205ENST00000399050 SIRT1Q96EB6 747 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 TCHPQ9BT92 498 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 DPH5Q9H2P9 285 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 MYO1AQ9UBC5 1043 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 NDC80O14777 642 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 GUCY2DQ02846 1103 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 PTPROQ16827 1216 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 SDCCAG8Q86SQ7 713 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-205ENST00000399050 CMTR1Q8N1G2 835 aaKnown RBP9.55□□□□□ -0.88
CTNND1-205ENST00000399050 FAM89AQ96GI7 184 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 VEZTQ9HBM0 779 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 LGR6Q9HBX8 967 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 DENND2AQ9ULE3 1009 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 FAM184BQ9ULE4 1060 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 JRKLQ9Y4A0 524 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 A0A1W2PQ27 194 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 A0A1W2PQ64 194 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 A0A1W2PQD8 194 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 ITIH3Q06033 890 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 C2orf54Q08AI8 447 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 PPP2R5BQ15173 497 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 HERC4Q5GLZ8 1057 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-205ENST00000399050 HAUS3Q68CZ6 603 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 ZNF354CQ86Y25 554 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 CCDC13Q8IYE1 715 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 SETDB2Q96T68 719 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 TNRQ92752 1358 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 PRDM1O75626 825 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 UNC5CLQ8IV45 518 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 U2AF1L4Q8WU68 220 aaKnown RBP9.55□□□□□ -0.88
CTNND1-205ENST00000399050 NLRP3Q96P20 1036 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 USP44Q9H0E7 712 aa9.55□□□□□ -0.88
CTNND1-205ENST00000399050 PABPN1LA6NDY0 278 aaKnown RBP9.54□□□□□ -0.88
CTNND1-205ENST00000399050 H7C1D1 291 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 COBLO75128 1261 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 PLCG2P16885 1265 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 COPB1P53618 953 aaKnown RBP9.54□□□□□ -0.88
CTNND1-205ENST00000399050 ST5P78524 1137 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 GCKRQ14397 625 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 NONOQ15233 471 aaKnown RBP eCLIP9.54□□□□□ -0.88
CTNND1-205ENST00000399050 KRT25Q7Z3Z0 450 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 TPX2Q9ULW0 747 aaKnown RBP9.54□□□□□ -0.88
CTNND1-205ENST00000399050 SSX2IPQ9Y2D8 614 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 UNC13AQ9UPW8 1703 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 IKBKBO14920 756 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 CHMP2AO43633 222 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 PDIA3P30101 505 aaKnown RBP9.54□□□□□ -0.88
CTNND1-205ENST00000399050 NCAPH2Q6IBW4 605 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 ZNF790Q6PG37 636 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 DCAF5Q96JK2 942 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 USTQ9Y2C2 406 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 TROVE2P10155 538 aaKnown RBP eCLIP9.54□□□□□ -0.88
CTNND1-205ENST00000399050 RFC4P35249 363 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 MRPL12P52815 198 aaKnown RBP9.54□□□□□ -0.88
CTNND1-205ENST00000399050 E2F5Q15329 346 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 ANKRD20A3Q5VUR7 823 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 SMC1BQ8NDV3 1235 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 IP6K1Q92551 441 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 KRT12Q99456 494 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 HOMER3Q9NSC5 361 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 STAP2Q9UGK3 403 aa9.54□□□□□ -0.88
CTNND1-205ENST00000399050 ZNF521Q96K83 1311 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms