RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 NR5A1Q13285 461 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 NCAPH2Q6IBW4 605 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 PPFIBP1Q86W92 1011 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 L2HGDHQ9H9P8 463 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 SERTAD1Q9UHV2 236 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 GUCA1BQ9UMX6 200 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 ANKRD31Q8N7Z5 1873 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 SIPA1L1O43166 1804 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 ZNF532Q9HCE3 1301 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 GOLGA8AA7E2F4 631 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 SEMA3EO15041 775 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 CUTAO60888 179 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 SHC4Q6S5L8 630 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 SH3RF1Q7Z6J0 888 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 FCHSD1Q86WN1 690 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 SPATA5Q8NB90 893 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.07□□□□□ -0.8
GIN1-201ENST00000399004 VPS16Q9H269 839 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 RASSF4Q9H2L5 321 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 KCNH3Q9ULD8 1083 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 SART3Q15020 963 aaKnown RBP10.07□□□□□ -0.8
GIN1-201ENST00000399004 TRIM65Q6PJ69 517 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 PAXIP1Q6ZW49 1069 aaPredicted RBP10.07□□□□□ -0.8
GIN1-201ENST00000399004 SHISA4Q96DD7 197 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 RIOK1Q9BRS2 568 aaKnown RBP10.07□□□□□ -0.8
GIN1-201ENST00000399004 BLZF1Q9H2G9 400 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 REXO1L1PQ8IX06 675 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 IFNL3Q8IZI9 196 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 ANKS1AQ92625 1134 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 GOLGA1Q92805 767 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 BRIP1Q9BX63 1249 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 TRIM10Q9UDY6 481 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 CBFA2T2O43439 604 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 MMP1P03956 469 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 ZNF18P17022 549 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 PHKA1P46020 1223 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 TOB1P50616 345 aaPredicted RBP10.06□□□□□ -0.8
GIN1-201ENST00000399004 SEMA3FQ13275 785 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 SLC9C2Q5TAH2 1124 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 TMEM139Q8IV31 216 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 FOXP4Q8IVH2 680 aaPredicted RBP10.06□□□□□ -0.8
GIN1-201ENST00000399004 TXLNBQ8N3L3 684 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 PCMTD1Q96MG8 357 aaPredicted RBP10.06□□□□□ -0.8
GIN1-201ENST00000399004 SLF1Q9BQI6 1058 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 KRT23Q9C075 422 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 WWC3Q9ULE0 1092 aa10.06□□□□□ -0.8
GIN1-201ENST00000399004 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.06□□□□□ -0.8
GIN1-201ENST00000399004 FAM205CA6NFA0 338 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 SRGAP2O75044 1071 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 PRDM1O75626 825 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 GUCY1A2P33402 732 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 IARSP41252 1262 aaKnown RBP10.05□□□□□ -0.8
GIN1-201ENST00000399004 NOVP48745 357 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 RASGRF1Q13972 1273 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 TMEM67Q5HYA8 995 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 SUSD4Q5VX71 490 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 C15orf52Q6ZUT6 534 aaKnown RBP10.05□□□□□ -0.8
GIN1-201ENST00000399004 METTL16Q86W50 562 aaKnown RBP10.05□□□□□ -0.8
GIN1-201ENST00000399004 GOLGA6L1Q8N7Z2 621 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 TRIML1Q8N9V2 468 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 CAGE1Q8TC20 777 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 NUP88Q99567 741 aaPredicted RBP10.05□□□□□ -0.8
GIN1-201ENST00000399004 FBXO2Q9UK22 296 aaPredicted RBP10.05□□□□□ -0.8
GIN1-201ENST00000399004 IFIT3O14879 490 aaKnown RBP10.05□□□□□ -0.8
GIN1-201ENST00000399004 AKNAD1Q5T1N1 836 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 MIGA1Q8NAN2 632 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 IPO4Q8TEX9 1081 aaKnown RBP10.05□□□□□ -0.8
GIN1-201ENST00000399004 PNKPQ96T60 521 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 ABCB6Q9NP58 842 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 CCDC87Q9NVE4 849 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 MYH8P13535 1937 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 EFCAB8A8MWE9 144 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 MINDY4BA8MYZ0 360 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 KIF5CO60282 957 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 ZPR1O75312 459 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 NPY5RQ15761 445 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 METTL24Q5JXM2 366 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 CPLX2Q6PUV4 134 aaKnown RBP10.05□□□□□ -0.8
GIN1-201ENST00000399004 LDHAL6AQ6ZMR3 332 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 SLC35F6Q8N357 371 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 TMTC2Q8N394 836 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 IGSF22Q8N9C0 903 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 CABP5Q9NP86 173 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 HDAC6Q9UBN7 1215 aa10.05□□□□□ -0.8
GIN1-201ENST00000399004 RRP15Q9Y3B9 282 aaKnown RBP10.05□□□□□ -0.8
GIN1-201ENST00000399004 RBBP6Q7Z6E9 1792 aaKnown RBP10.04□□□□□ -0.8
GIN1-201ENST00000399004 PTPREP23469 700 aa10.04□□□□□ -0.8
GIN1-201ENST00000399004 RC3H1Q5TC82 1133 aaKnown RBP10.04□□□□□ -0.8
GIN1-201ENST00000399004 VSTM4Q8IW00 320 aa10.04□□□□□ -0.8
GIN1-201ENST00000399004 FAM107BQ9H098 131 aa10.04□□□□□ -0.8
GIN1-201ENST00000399004 INTS13Q9NVM9 706 aa10.04□□□□□ -0.8
GIN1-201ENST00000399004 BTG4Q9NY30 223 aa10.04□□□□□ -0.8
GIN1-201ENST00000399004 HOOK1Q9UJC3 728 aaKnown RBP10.04□□□□□ -0.8
GIN1-201ENST00000399004 ARHGAP6O43182 974 aa10.04□□□□□ -0.8
GIN1-201ENST00000399004 ORC4O43929 436 aa10.04□□□□□ -0.8
GIN1-201ENST00000399004 CASP14P31944 242 aa10.04□□□□□ -0.8
GIN1-201ENST00000399004 RBL2Q08999 1139 aa10.04□□□□□ -0.8
GIN1-201ENST00000399004 APTXQ7Z2E3 356 aaKnown RBP10.04□□□□□ -0.8
GIN1-201ENST00000399004 ZNF384Q8TF68 577 aa10.04□□□□□ -0.8
GIN1-201ENST00000399004 CNNM1Q9NRU3 951 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms