RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 TNFRSF25Q93038 417 aa29.54■■■□□ 2.32
SHARPIN-202ENST00000398712 BECN2A8MW95 431 aa29.54■■■□□ 2.32
SHARPIN-202ENST00000398712 TPM3P06753 285 aa29.54■■■□□ 2.32
SHARPIN-202ENST00000398712 ERCC4Q92889 916 aaPredicted RBP29.54■■■□□ 2.32
SHARPIN-202ENST00000398712 ZNF500O60304 480 aaPredicted RBP29.53■■■□□ 2.32
SHARPIN-202ENST00000398712 ATP2B1P20020 1258 aa29.53■■■□□ 2.32
SHARPIN-202ENST00000398712 ELOA2Q8IYF1 753 aaPredicted RBP29.53■■■□□ 2.32
SHARPIN-202ENST00000398712 CNKSR1Q969H4 720 aa29.53■■■□□ 2.32
SHARPIN-202ENST00000398712 TEKT1Q969V4 418 aa29.53■■■□□ 2.32
SHARPIN-202ENST00000398712 PICALMQ13492 652 aa29.52■■■□□ 2.32
SHARPIN-202ENST00000398712 STAG2Q8N3U4 1231 aa29.52■■■□□ 2.32
SHARPIN-202ENST00000398712 UPF1Q92900 1129 aaKnown RBP eCLIP29.52■■■□□ 2.32
SHARPIN-202ENST00000398712 ANO8Q9HCE9 1232 aaPredicted RBP29.52■■■□□ 2.32
SHARPIN-202ENST00000398712 PALM3A6NDB9 673 aaPredicted RBP29.52■■■□□ 2.32
SHARPIN-202ENST00000398712 NLRP12P59046 1061 aa29.52■■■□□ 2.32
SHARPIN-202ENST00000398712 FKBP1AP62942 108 aaKnown RBP29.52■■■□□ 2.32
SHARPIN-202ENST00000398712 BPIFA3Q9BQP9 254 aa29.52■■■□□ 2.32
SHARPIN-202ENST00000398712 USP40Q9NVE5 1235 aa29.52■■■□□ 2.32
SHARPIN-202ENST00000398712 HOOK1Q9UJC3 728 aaKnown RBP29.52■■■□□ 2.32
SHARPIN-202ENST00000398712 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.52■■■□□ 2.32
SHARPIN-202ENST00000398712 PLIN4Q96Q06 1357 aa29.51■■■□□ 2.32
SHARPIN-202ENST00000398712 SLX4Q8IY92 1834 aa29.51■■■□□ 2.32
SHARPIN-202ENST00000398712 FAM205CA6NFA0 338 aa29.51■■■□□ 2.31
SHARPIN-202ENST00000398712 TOP1P11387 765 aaKnown RBP29.51■■■□□ 2.31
SHARPIN-202ENST00000398712 TRAPPC10P48553 1259 aa29.51■■■□□ 2.31
SHARPIN-202ENST00000398712 EZH2Q15910 746 aaKnown RBP29.51■■■□□ 2.31
SHARPIN-202ENST00000398712 KRBA2Q6ZNG9 492 aa29.51■■■□□ 2.31
SHARPIN-202ENST00000398712 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.51■■■□□ 2.31
SHARPIN-202ENST00000398712 FAM177A1Q8N128 213 aaPredicted RBP29.51■■■□□ 2.31
SHARPIN-202ENST00000398712 CAMKK2Q96RR4 588 aa29.51■■■□□ 2.31
SHARPIN-202ENST00000398712 TRIM5Q9C035 493 aa29.51■■■□□ 2.31
SHARPIN-202ENST00000398712 MYH8P13535 1937 aa29.5■■■□□ 2.31
SHARPIN-202ENST00000398712 EARS2Q5JPH6 523 aaKnown RBP29.5■■■□□ 2.31
SHARPIN-202ENST00000398712 SARM1Q6SZW1 724 aa29.5■■■□□ 2.31
SHARPIN-202ENST00000398712 PLA2G4DQ86XP0 818 aa29.5■■■□□ 2.31
SHARPIN-202ENST00000398712 CNNM3Q8NE01 707 aa29.5■■■□□ 2.31
SHARPIN-202ENST00000398712 PIBF1Q8WXW3 757 aa29.5■■■□□ 2.31
SHARPIN-202ENST00000398712 MXD3Q9BW11 206 aa29.5■■■□□ 2.31
SHARPIN-202ENST00000398712 SCNN1DP51172 638 aa29.49■■■□□ 2.31
SHARPIN-202ENST00000398712 ZNF75DP51815 510 aa29.49■■■□□ 2.31
SHARPIN-202ENST00000398712 DHX40Q8IX18 779 aaKnown RBP29.49■■■□□ 2.31
SHARPIN-202ENST00000398712 DBNDD1Q9H9R9 158 aa29.49■■■□□ 2.31
SHARPIN-202ENST00000398712 TUBE1Q9UJT0 475 aa29.49■■■□□ 2.31
SHARPIN-202ENST00000398712 BAZ2BQ9UIF8 2168 aaKnown RBP29.49■■■□□ 2.31
SHARPIN-202ENST00000398712 NOVP48745 357 aa29.49■■■□□ 2.31
SHARPIN-202ENST00000398712 GABPAQ06546 454 aa29.49■■■□□ 2.31
SHARPIN-202ENST00000398712 TTC38Q5R3I4 469 aa29.49■■■□□ 2.31
SHARPIN-202ENST00000398712 FERMT2Q96AC1 680 aa29.49■■■□□ 2.31
SHARPIN-202ENST00000398712 SWAP70Q9UH65 585 aa29.49■■■□□ 2.31
SHARPIN-202ENST00000398712 EN1Q05925 392 aaPredicted RBP29.48■■■□□ 2.31
SHARPIN-202ENST00000398712 STRIP1Q5VSL9 837 aa29.48■■■□□ 2.31
SHARPIN-202ENST00000398712 CCDC148Q8NFR7 591 aa29.48■■■□□ 2.31
SHARPIN-202ENST00000398712 CEP95Q96GE4 821 aa29.48■■■□□ 2.31
SHARPIN-202ENST00000398712 MRIQ9BWK5 157 aa29.48■■■□□ 2.31
SHARPIN-202ENST00000398712 SPZ1Q9BXG8 430 aa29.48■■■□□ 2.31
SHARPIN-202ENST00000398712 ADAMTSL1Q8N6G6 1762 aa29.48■■■□□ 2.31
SHARPIN-202ENST00000398712 MYO3BQ8WXR4 1341 aa29.47■■■□□ 2.31
SHARPIN-202ENST00000398712 A0A087WWV3 80 aa29.47■■■□□ 2.31
SHARPIN-202ENST00000398712 PARP1P09874 1014 aaKnown RBP29.47■■■□□ 2.31
SHARPIN-202ENST00000398712 LONRF3Q496Y0 759 aa29.47■■■□□ 2.31
SHARPIN-202ENST00000398712 GALNT17Q6IS24 598 aa29.47■■■□□ 2.31
SHARPIN-202ENST00000398712 BLIDQ8IZY5 108 aa29.47■■■□□ 2.31
SHARPIN-202ENST00000398712 DDX4Q9NQI0 724 aaKnown RBP29.47■■■□□ 2.31
SHARPIN-202ENST00000398712 GRIN1Q05586 938 aa29.47■■■□□ 2.31
SHARPIN-202ENST00000398712 DPCR1Q3MIW9 517 aa29.47■■■□□ 2.31
SHARPIN-202ENST00000398712 CDC42EP5Q6NZY7 148 aa29.47■■■□□ 2.31
SHARPIN-202ENST00000398712 AOPEPQ8N6M6 819 aa29.47■■■□□ 2.31
SHARPIN-202ENST00000398712 PCDHA4Q9UN74 947 aa29.47■■■□□ 2.31
SHARPIN-202ENST00000398712 KLRF2D3W0D1 207 aa29.46■■■□□ 2.31
SHARPIN-202ENST00000398712 CRKP46108 304 aa29.46■■■□□ 2.31
SHARPIN-202ENST00000398712 KIAA2012Q0VF49 1180 aa29.46■■■□□ 2.31
SHARPIN-202ENST00000398712 SPECC1Q5M775 1068 aa29.46■■■□□ 2.31
SHARPIN-202ENST00000398712 OSBPL5Q9H0X9 879 aaPredicted RBP29.46■■■□□ 2.31
SHARPIN-202ENST00000398712 CSRNP2Q9H175 543 aa29.46■■■□□ 2.31
SHARPIN-202ENST00000398712 MTMR7Q9Y216 660 aa29.46■■■□□ 2.31
SHARPIN-202ENST00000398712 ECE2O60344 883 aa29.45■■■□□ 2.31
SHARPIN-202ENST00000398712 VEGFAP15692 232 aaPredicted RBP29.45■■■□□ 2.31
SHARPIN-202ENST00000398712 SMARCA1P28370 1054 aa29.45■■■□□ 2.31
SHARPIN-202ENST00000398712 CDC25BP30305 580 aa29.45■■■□□ 2.31
SHARPIN-202ENST00000398712 CHRNA5P30532 468 aa29.45■■■□□ 2.31
SHARPIN-202ENST00000398712 CC2D2BQ6DHV5 1058 aa29.45■■■□□ 2.31
SHARPIN-202ENST00000398712 APOBEC3HQ6NTF7 200 aaKnown RBP29.45■■■□□ 2.31
SHARPIN-202ENST00000398712 PIK3AP1Q6ZUJ8 805 aa29.45■■■□□ 2.31
SHARPIN-202ENST00000398712 SPC24Q8NBT2 197 aa29.45■■■□□ 2.31
SHARPIN-202ENST00000398712 GPKOWQ92917 476 aaPredicted RBP eCLIP29.45■■■□□ 2.31
SHARPIN-202ENST00000398712 ZDHHC15Q96MV8 337 aa29.45■■■□□ 2.31
SHARPIN-202ENST00000398712 SERPINB13Q9UIV8 391 aa29.45■■■□□ 2.31
SHARPIN-202ENST00000398712 BIN1O00499 593 aa29.44■■■□□ 2.3
SHARPIN-202ENST00000398712 CYTH3O43739 400 aa29.44■■■□□ 2.3
SHARPIN-202ENST00000398712 HLA-DOAP06340 250 aa29.44■■■□□ 2.3
SHARPIN-202ENST00000398712 HDLBPQ00341 1268 aaKnown RBP29.44■■■□□ 2.3
SHARPIN-202ENST00000398712 KANK3Q6NY19 840 aa29.44■■■□□ 2.3
SHARPIN-202ENST00000398712 METTL16Q86W50 562 aaKnown RBP29.44■■■□□ 2.3
SHARPIN-202ENST00000398712 SOCS7O14512 581 aa29.44■■■□□ 2.3
SHARPIN-202ENST00000398712 PNOCQ13519 176 aa29.44■■■□□ 2.3
SHARPIN-202ENST00000398712 DAGLBQ8NCG7 672 aa29.44■■■□□ 2.3
SHARPIN-202ENST00000398712 BARHL2Q9NY43 387 aa29.44■■■□□ 2.3
SHARPIN-202ENST00000398712 POLR2DO15514 142 aaKnown RBP29.43■■■□□ 2.3
SHARPIN-202ENST00000398712 ATP2C1P98194 919 aaPredicted RBP29.43■■■□□ 2.3
SHARPIN-202ENST00000398712 ZNF174Q15697 407 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms