RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 RASA3Q14644 834 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 TBC1D22AQ8WUA7 517 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 CCDC77Q9BR77 488 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 DNM3Q9UQ16 869 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 MAST3O60307 1309 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 TNFAIP3P21580 790 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 MRPS9P82933 396 aaKnown RBP12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 CHRNDQ07001 517 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 BRDTQ58F21 947 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 IFNL3Q8IZI9 196 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 SSH3Q8TE77 659 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 IBTKQ9P2D0 1353 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 ATP2A1O14983 1001 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 BRD1O95696 1058 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 PPP1R7Q15435 360 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 CALCRLQ16602 461 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 FAM47CQ5HY64 1035 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 PI16Q6UXB8 463 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 GPT2Q8TD30 523 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 ZBTB16Q05516 673 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 LRMPQ12912 555 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 SPECC1LQ69YQ0 1117 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 IPO4Q8TEX9 1081 aaKnown RBP12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 RNF34Q969K3 372 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 PLEKHA4Q9H4M7 779 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 AZI2Q9H6S1 392 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 GCNT3O95395 438 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 PRPHP41219 470 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 CRKLP46109 303 aaKnown RBP12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 ZBTB38Q8NAP3 1195 aaPredicted RBP12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 SELENOSQ9BQE4 189 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 CPS1P31327 1500 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 BTBD18B2RXH4 712 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 HSPD1P10809 573 aaKnown RBP12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 HSPA4P34932 840 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 MXRA7P84157 204 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 CNGA4Q8IV77 575 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 PNMA1Q8ND90 353 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 GPKOWQ92917 476 aaPredicted RBP eCLIP12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 TXNDC16Q9P2K2 825 aa12.87□□□□□ -0.35
PCDHGA8-201ENST00000398604 FANCCQ00597 558 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 ZNF827Q17R98 1081 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 NDC80O14777 642 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 UAP1Q16222 522 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 INF2Q27J81 1249 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 ZNF526Q8TF50 670 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 BEGAINQ9BUH8 593 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 FAM207AQ9NSI2 230 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 TNKSO95271 1327 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 KIF13AQ9H1H9 1805 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 KLRF2D3W0D1 207 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 FERP16591 822 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 STRN3Q13033 797 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 ARHGAP44Q17R89 818 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 CNNM4Q6P4Q7 775 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 KCNK9Q9NPC2 374 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 RSPH14Q9UHP6 348 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 RASAL2Q9UJF2 1139 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 USTQ9Y2C2 406 aa12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 COL3A1P02461 1466 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA8-201ENST00000398604 SF3A3Q12874 501 aaKnown RBP eCLIP12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 PTPROQ16827 1216 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 KRT25Q7Z3Z0 450 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 LLPHQ9BRT6 129 aaKnown RBP12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 MRPL44Q9H9J2 332 aaKnown RBP12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 SUGCTQ9HAC7 445 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 TLR7Q9NYK1 1049 aaKnown RBP12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 CSADQ9Y600 493 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 USP32Q8NFA0 1604 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 PDE6BP35913 854 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 PRR16Q569H4 304 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 UTP14CQ5TAP6 766 aaKnown RBP12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 APBB1IPQ7Z5R6 666 aaPredicted RBP12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 DBNDD1Q9H9R9 158 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 CUTAO60888 179 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 PPP1R21Q6ZMI0 780 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 CABP7Q86V35 215 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 METTL13Q8N6R0 699 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 SOS2Q07890 1332 aaPredicted RBP12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 LRRC7Q96NW7 1537 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 PDE8BO95263 885 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 VAV2P52735 878 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 CYP4A11Q02928 519 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 CALCOCO2Q13137 446 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 NLRX1Q86UT6 975 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 CBX8Q9HC52 389 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 SERTAD1Q9UHV2 236 aa12.85□□□□□ -0.35
PCDHGA8-201ENST00000398604 HGSO14964 777 aaPredicted RBP12.84□□□□□ -0.35
PCDHGA8-201ENST00000398604 GAS7O60861 476 aa12.84□□□□□ -0.35
PCDHGA8-201ENST00000398604 MYCP01106 439 aaPredicted RBP12.84□□□□□ -0.35
PCDHGA8-201ENST00000398604 CNGA1P29973 690 aa12.84□□□□□ -0.35
PCDHGA8-201ENST00000398604 TECP42680 631 aa12.84□□□□□ -0.35
PCDHGA8-201ENST00000398604 PAK1Q13153 545 aa12.84□□□□□ -0.35
PCDHGA8-201ENST00000398604 MYSM1Q5VVJ2 828 aa12.84□□□□□ -0.35
PCDHGA8-201ENST00000398604 FANCBQ8NB91 859 aa12.84□□□□□ -0.35
PCDHGA8-201ENST00000398604 USP28Q96RU2 1077 aa12.84□□□□□ -0.35
PCDHGA8-201ENST00000398604 FAM169AQ9Y6X4 670 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms