RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 TRIM5Q9C035 493 aa17.53■□□□□ 0.4
MBD1-209ENST00000398495 CEP131Q9UPN4 1083 aa17.53■□□□□ 0.4
MBD1-209ENST00000398495 MTMR7Q9Y216 660 aa17.53■□□□□ 0.4
MBD1-209ENST00000398495 SLX4Q8IY92 1834 aa17.53■□□□□ 0.4
MBD1-209ENST00000398495 NLRP12P59046 1061 aa17.53■□□□□ 0.4
MBD1-209ENST00000398495 LONRF3Q496Y0 759 aa17.53■□□□□ 0.4
MBD1-209ENST00000398495 METTL16Q86W50 562 aaKnown RBP17.53■□□□□ 0.4
MBD1-209ENST00000398495 ZNF287Q9HBT7 754 aa17.53■□□□□ 0.4
MBD1-209ENST00000398495 STX8Q9UNK0 236 aa17.53■□□□□ 0.4
MBD1-209ENST00000398495 TTF2Q9UNY4 1162 aaKnown RBP17.53■□□□□ 0.4
MBD1-209ENST00000398495 SUGT1Q9Y2Z0 365 aa17.53■□□□□ 0.4
MBD1-209ENST00000398495 SRPRBQ9Y5M8 271 aaKnown RBP17.53■□□□□ 0.4
MBD1-209ENST00000398495 ZNF646O15015 1829 aaPredicted RBP17.52■□□□□ 0.4
MBD1-209ENST00000398495 SCNN1DP51172 638 aa17.52■□□□□ 0.4
MBD1-209ENST00000398495 NLRP5P59047 1200 aa17.52■□□□□ 0.4
MBD1-209ENST00000398495 PNOCQ13519 176 aa17.52■□□□□ 0.4
MBD1-209ENST00000398495 KRBA2Q6ZNG9 492 aa17.52■□□□□ 0.4
MBD1-209ENST00000398495 NEDD1Q8NHV4 660 aa17.52■□□□□ 0.4
MBD1-209ENST00000398495 GPKOWQ92917 476 aaPredicted RBP eCLIP17.52■□□□□ 0.4
MBD1-209ENST00000398495 DDX4Q9NQI0 724 aaKnown RBP17.52■□□□□ 0.4
MBD1-209ENST00000398495 ZRSR1Q15695 479 aaKnown RBP17.52■□□□□ 0.39
MBD1-209ENST00000398495 KCNF1Q9H3M0 494 aa17.52■□□□□ 0.39
MBD1-209ENST00000398495 TUBE1Q9UJT0 475 aa17.52■□□□□ 0.39
MBD1-209ENST00000398495 MYH8P13535 1937 aa17.51■□□□□ 0.39
MBD1-209ENST00000398495 BECN2A8MW95 431 aa17.51■□□□□ 0.39
MBD1-209ENST00000398495 SARM1Q6SZW1 724 aa17.51■□□□□ 0.39
MBD1-209ENST00000398495 ZNF579Q8NAF0 562 aaKnown RBP17.51■□□□□ 0.39
MBD1-209ENST00000398495 NAT10Q9H0A0 1025 aaKnown RBP17.51■□□□□ 0.39
MBD1-209ENST00000398495 CSRNP2Q9H175 543 aa17.51■□□□□ 0.39
MBD1-209ENST00000398495 FAM13BQ9NYF5 915 aa17.51■□□□□ 0.39
MBD1-209ENST00000398495 FOXN1O15353 648 aa17.5■□□□□ 0.39
MBD1-209ENST00000398495 TTC38Q5R3I4 469 aa17.5■□□□□ 0.39
MBD1-209ENST00000398495 ISM2Q6H9L7 571 aa17.5■□□□□ 0.39
MBD1-209ENST00000398495 TMX4Q9H1E5 349 aaPredicted RBP17.5■□□□□ 0.39
MBD1-209ENST00000398495 DBNDD1Q9H9R9 158 aa17.5■□□□□ 0.39
MBD1-209ENST00000398495 ZNF219Q9P2Y4 722 aaPredicted RBP17.5■□□□□ 0.39
MBD1-209ENST00000398495 MORC2Q9Y6X9 1032 aaPredicted RBP17.5■□□□□ 0.39
MBD1-209ENST00000398495 PALM3A6NDB9 673 aaPredicted RBP17.5■□□□□ 0.39
MBD1-209ENST00000398495 G3V3G9 751 aa17.5■□□□□ 0.39
MBD1-209ENST00000398495 CYTH3O43739 400 aa17.5■□□□□ 0.39
MBD1-209ENST00000398495 GNAQP50148 359 aa17.5■□□□□ 0.39
MBD1-209ENST00000398495 ZNF174Q15697 407 aa17.5■□□□□ 0.39
MBD1-209ENST00000398495 DCAF8Q5TAQ9 597 aa17.5■□□□□ 0.39
MBD1-209ENST00000398495 STYK1Q6J9G0 422 aa17.5■□□□□ 0.39
MBD1-209ENST00000398495 CNNM3Q8NE01 707 aa17.5■□□□□ 0.39
MBD1-209ENST00000398495 CEP95Q96GE4 821 aa17.5■□□□□ 0.39
MBD1-209ENST00000398495 BPIFA3Q9BQP9 254 aa17.5■□□□□ 0.39
MBD1-209ENST00000398495 KCNQ5Q9NR82 932 aa17.5■□□□□ 0.39
MBD1-209ENST00000398495 SCN9AQ15858 1988 aa17.5■□□□□ 0.39
MBD1-209ENST00000398495 GOLGA6L6A8MZA4 724 aa17.49■□□□□ 0.39
MBD1-209ENST00000398495 GOLGA8HP0CJ92 632 aa17.49■□□□□ 0.39
MBD1-209ENST00000398495 CHRNA5P30532 468 aa17.49■□□□□ 0.39
MBD1-209ENST00000398495 KIAA2012Q0VF49 1180 aa17.49■□□□□ 0.39
MBD1-209ENST00000398495 EZH2Q15910 746 aaKnown RBP17.49■□□□□ 0.39
MBD1-209ENST00000398495 TYW1BQ6NUM6 668 aa17.49■□□□□ 0.39
MBD1-209ENST00000398495 PIK3AP1Q6ZUJ8 805 aa17.49■□□□□ 0.39
MBD1-209ENST00000398495 USP49Q70CQ1 688 aa17.49■□□□□ 0.39
MBD1-209ENST00000398495 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.49■□□□□ 0.39
MBD1-209ENST00000398495 USP40Q9NVE5 1235 aa17.49■□□□□ 0.39
MBD1-209ENST00000398495 PLIN4Q96Q06 1357 aa17.49■□□□□ 0.39
MBD1-209ENST00000398495 PTGS1P23219 599 aa17.49■□□□□ 0.39
MBD1-209ENST00000398495 WWC2Q6AWC2 1192 aa17.49■□□□□ 0.39
MBD1-209ENST00000398495 SERTAD1Q9UHV2 236 aa17.49■□□□□ 0.39
MBD1-209ENST00000398495 NRBP1Q9UHY1 535 aa17.49■□□□□ 0.39
MBD1-209ENST00000398495 H0YIN7 160 aa17.48■□□□□ 0.39
MBD1-209ENST00000398495 POLR2DO15514 142 aaKnown RBP17.48■□□□□ 0.39
MBD1-209ENST00000398495 OFD1O75665 1012 aa17.48■□□□□ 0.39
MBD1-209ENST00000398495 PRR29P0C7W0 189 aa17.48■□□□□ 0.39
MBD1-209ENST00000398495 CDC25BP30305 580 aa17.48■□□□□ 0.39
MBD1-209ENST00000398495 MDM2Q00987 491 aaPredicted RBP17.48■□□□□ 0.39
MBD1-209ENST00000398495 GABPAQ06546 454 aa17.48■□□□□ 0.39
MBD1-209ENST00000398495 DRC7Q8IY82 874 aa17.48■□□□□ 0.39
MBD1-209ENST00000398495 CPVLQ9H3G5 476 aa17.48■□□□□ 0.39
MBD1-209ENST00000398495 SH3GLB2Q9NR46 395 aa17.48■□□□□ 0.39
MBD1-209ENST00000398495 RGS17Q9UGC6 210 aaPredicted RBP17.48■□□□□ 0.39
MBD1-209ENST00000398495 TPM3P06753 285 aa17.47■□□□□ 0.39
MBD1-209ENST00000398495 TOP1P11387 765 aaKnown RBP17.47■□□□□ 0.39
MBD1-209ENST00000398495 SLC15A2Q16348 729 aa17.47■□□□□ 0.39
MBD1-209ENST00000398495 CDC42EP5Q6NZY7 148 aa17.47■□□□□ 0.39
MBD1-209ENST00000398495 FOXP4Q8IVH2 680 aaPredicted RBP17.47■□□□□ 0.39
MBD1-209ENST00000398495 BLIDQ8IZY5 108 aa17.47■□□□□ 0.39
MBD1-209ENST00000398495 C17orf53Q8N3J3 647 aaPredicted RBP17.47■□□□□ 0.39
MBD1-209ENST00000398495 ACTN4O43707 911 aaKnown RBP17.47■□□□□ 0.39
MBD1-209ENST00000398495 CALML3P27482 149 aa17.47■□□□□ 0.39
MBD1-209ENST00000398495 NOVP48745 357 aa17.47■□□□□ 0.39
MBD1-209ENST00000398495 TEKT1Q969V4 418 aa17.47■□□□□ 0.39
MBD1-209ENST00000398495 CLIP2Q9UDT6 1046 aa17.47■□□□□ 0.39
MBD1-209ENST00000398495 PYCARDQ9ULZ3 195 aa17.47■□□□□ 0.39
MBD1-209ENST00000398495 PCDHA4Q9UN74 947 aa17.47■□□□□ 0.39
MBD1-209ENST00000398495 KLRF2D3W0D1 207 aa17.46■□□□□ 0.39
MBD1-209ENST00000398495 STXBP3O00186 592 aa17.46■□□□□ 0.39
MBD1-209ENST00000398495 BMP15O95972 392 aa17.46■□□□□ 0.39
MBD1-209ENST00000398495 AKR1B1P15121 316 aa17.46■□□□□ 0.39
MBD1-209ENST00000398495 EN1Q05925 392 aaPredicted RBP17.46■□□□□ 0.39
MBD1-209ENST00000398495 APOBEC3HQ6NTF7 200 aaKnown RBP17.46■□□□□ 0.39
MBD1-209ENST00000398495 POTEAQ6S8J7 498 aa17.46■□□□□ 0.39
MBD1-209ENST00000398495 HHIPL2Q6UWX4 724 aa17.46■□□□□ 0.39
MBD1-209ENST00000398495 CCDC186Q7Z3E2 898 aa17.46■□□□□ 0.39
MBD1-209ENST00000398495 HEATR3Q7Z4Q2 680 aa17.46■□□□□ 0.39
MBD1-209ENST00000398495 ELOA2Q8IYF1 753 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms