RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 SLC44A5Q8NCS7 719 aa14.59□□□□□ -0.07
TFF3-202ENST00000398431 LPAR1Q92633 364 aa14.59□□□□□ -0.07
TFF3-202ENST00000398431 DYNLL2Q96FJ2 89 aa14.59□□□□□ -0.07
TFF3-202ENST00000398431 CRNKL1Q9BZJ0 848 aaKnown RBP14.59□□□□□ -0.07
TFF3-202ENST00000398431 SENP6Q9GZR1 1112 aaPredicted RBP14.59□□□□□ -0.07
TFF3-202ENST00000398431 MTMR10Q9NXD2 777 aa14.59□□□□□ -0.07
TFF3-202ENST00000398431 HOXC10Q9NYD6 342 aa14.59□□□□□ -0.07
TFF3-202ENST00000398431 COL6A3P12111 3177 aa14.58□□□□□ -0.08
TFF3-202ENST00000398431 GOLIM4O00461 696 aa14.58□□□□□ -0.08
TFF3-202ENST00000398431 DLL1O00548 723 aa14.58□□□□□ -0.08
TFF3-202ENST00000398431 STRNO43815 780 aa14.58□□□□□ -0.08
TFF3-202ENST00000398431 COBLO75128 1261 aa14.58□□□□□ -0.08
TFF3-202ENST00000398431 CYBAP13498 195 aa14.58□□□□□ -0.08
TFF3-202ENST00000398431 CNGA1P29973 690 aa14.58□□□□□ -0.08
TFF3-202ENST00000398431 KIF1BPQ96EK5 621 aa14.58□□□□□ -0.08
TFF3-202ENST00000398431 IVNS1ABPQ9Y6Y0 642 aa14.58□□□□□ -0.08
TFF3-202ENST00000398431 NAV1Q8NEY1 1877 aa14.57□□□□□ -0.08
TFF3-202ENST00000398431 APBB1O00213 710 aa14.57□□□□□ -0.08
TFF3-202ENST00000398431 MPHOSPH10O00566 681 aaKnown RBP14.57□□□□□ -0.08
TFF3-202ENST00000398431 CHGBP05060 677 aa14.57□□□□□ -0.08
TFF3-202ENST00000398431 AKR1B1P15121 316 aa14.57□□□□□ -0.08
TFF3-202ENST00000398431 ERCC3P19447 782 aa14.57□□□□□ -0.08
TFF3-202ENST00000398431 ADORA2AP29274 412 aa14.57□□□□□ -0.08
TFF3-202ENST00000398431 DSG3P32926 999 aa14.57□□□□□ -0.08
TFF3-202ENST00000398431 CLEC10AQ8IUN9 316 aa14.57□□□□□ -0.08
TFF3-202ENST00000398431 RPAP2Q8IXW5 612 aaPredicted RBP14.57□□□□□ -0.08
TFF3-202ENST00000398431 CLASRPQ8N2M8 674 aaKnown RBP14.57□□□□□ -0.08
TFF3-202ENST00000398431 SHCBP1Q8NEM2 672 aa14.57□□□□□ -0.08
TFF3-202ENST00000398431 DNAJC2Q99543 621 aaKnown RBP14.57□□□□□ -0.08
TFF3-202ENST00000398431 SPATC1LQ9H0A9 340 aa14.57□□□□□ -0.08
TFF3-202ENST00000398431 ARMT1Q9H993 441 aa14.57□□□□□ -0.08
TFF3-202ENST00000398431 ZBTB40Q9NUA8 1239 aa14.57□□□□□ -0.08
TFF3-202ENST00000398431 POTEB2H3BUK9 544 aa14.56□□□□□ -0.08
TFF3-202ENST00000398431 DNM1LO00429 736 aa14.56□□□□□ -0.08
TFF3-202ENST00000398431 MSCO60682 206 aa14.56□□□□□ -0.08
TFF3-202ENST00000398431 ADD2P35612 726 aa14.56□□□□□ -0.08
TFF3-202ENST00000398431 ATN1P54259 1190 aaPredicted RBP14.56□□□□□ -0.08
TFF3-202ENST00000398431 PRAMEF19Q5SWL8 479 aa14.56□□□□□ -0.08
TFF3-202ENST00000398431 OLFML2BQ68BL8 750 aa14.56□□□□□ -0.08
TFF3-202ENST00000398431 TMEM179Q6ZVK1 233 aa14.56□□□□□ -0.08
TFF3-202ENST00000398431 DPP9Q86TI2 863 aa14.56□□□□□ -0.08
TFF3-202ENST00000398431 STXBP5LQ9Y2K9 1186 aa14.56□□□□□ -0.08
TFF3-202ENST00000398431 TMX2Q9Y320 296 aa14.56□□□□□ -0.08
TFF3-202ENST00000398431 ZNFX1Q9P2E3 1918 aaKnown RBP14.55□□□□□ -0.08
TFF3-202ENST00000398431 SMCHD1A6NHR9 2005 aa14.55□□□□□ -0.08
TFF3-202ENST00000398431 CYP2D7A0A087X1C5 515 aa14.55□□□□□ -0.08
TFF3-202ENST00000398431 IFIT2P09913 472 aaKnown RBP14.55□□□□□ -0.08
TFF3-202ENST00000398431 GJC2Q5T442 439 aaPredicted RBP14.55□□□□□ -0.08
TFF3-202ENST00000398431 C12orf60Q5U649 245 aa14.55□□□□□ -0.08
TFF3-202ENST00000398431 ANO1Q5XXA6 986 aa14.55□□□□□ -0.08
TFF3-202ENST00000398431 ATG4CQ96DT6 458 aa14.55□□□□□ -0.08
TFF3-202ENST00000398431 TANGO6Q9C0B7 1094 aa14.55□□□□□ -0.08
TFF3-202ENST00000398431 BOLA2Q9H3K6 86 aa14.55□□□□□ -0.08
TFF3-202ENST00000398431 ATP8A2Q9NTI2 1148 aa14.55□□□□□ -0.08
TFF3-202ENST00000398431 SWAP70Q9UH65 585 aa14.55□□□□□ -0.08
TFF3-202ENST00000398431 ADAMTS5Q9UNA0 930 aa14.55□□□□□ -0.08
TFF3-202ENST00000398431 MBD4O95243 580 aa14.54□□□□□ -0.08
TFF3-202ENST00000398431 ATP5JP18859 108 aa14.54□□□□□ -0.08
TFF3-202ENST00000398431 CDK8P49336 464 aa14.54□□□□□ -0.08
TFF3-202ENST00000398431 SLC39A5Q6ZMH5 540 aa14.54□□□□□ -0.08
TFF3-202ENST00000398431 SPICE1Q8N0Z3 855 aa14.54□□□□□ -0.08
TFF3-202ENST00000398431 VCPKMTQ9H867 229 aa14.54□□□□□ -0.08
TFF3-202ENST00000398431 PAG1Q9NWQ8 432 aa14.54□□□□□ -0.08
TFF3-202ENST00000398431 COG6Q9Y2V7 657 aa14.54□□□□□ -0.08
TFF3-202ENST00000398431 A0A0G2JMZ2 1700 aa14.54□□□□□ -0.08
TFF3-202ENST00000398431 ZNF236Q9UL36 1845 aa14.54□□□□□ -0.08
TFF3-202ENST00000398431 BAZ2AQ9UIF9 1905 aaKnown RBP14.54□□□□□ -0.08
TFF3-202ENST00000398431 DNAH12Q6ZR08 3092 aa14.53□□□□□ -0.08
TFF3-202ENST00000398431 USP17L12C9JPN9 530 aa14.53□□□□□ -0.08
TFF3-202ENST00000398431 USP17L21D6R901 530 aa14.53□□□□□ -0.08
TFF3-202ENST00000398431 SEPT4O43236 478 aa14.53□□□□□ -0.08
TFF3-202ENST00000398431 RAB11FIP3O75154 756 aa14.53□□□□□ -0.08
TFF3-202ENST00000398431 RTP1P59025 263 aa14.53□□□□□ -0.08
TFF3-202ENST00000398431 TMEM132BQ14DG7 1078 aa14.53□□□□□ -0.08
TFF3-202ENST00000398431 ABRAQ8N0Z2 381 aa14.53□□□□□ -0.08
TFF3-202ENST00000398431 MB21D1Q8N884 522 aa14.53□□□□□ -0.08
TFF3-202ENST00000398431 ARRDC4Q8NCT1 418 aa14.53□□□□□ -0.08
TFF3-202ENST00000398431 CCDC17Q96LX7 622 aa14.53□□□□□ -0.08
TFF3-202ENST00000398431 HAUS7Q99871 368 aa14.53□□□□□ -0.08
TFF3-202ENST00000398431 MROH8Q9H579 483 aa14.53□□□□□ -0.08
TFF3-202ENST00000398431 PARP14Q460N5 1801 aa14.52□□□□□ -0.08
TFF3-202ENST00000398431 ZBED9Q6R2W3 1325 aa14.52□□□□□ -0.08
TFF3-202ENST00000398431 FLOT1O75955 427 aa14.52□□□□□ -0.09
TFF3-202ENST00000398431 EEF2P13639 858 aaKnown RBP14.52□□□□□ -0.09
TFF3-202ENST00000398431 ICA1Q05084 483 aa14.52□□□□□ -0.09
TFF3-202ENST00000398431 PLS1Q14651 629 aa14.52□□□□□ -0.09
TFF3-202ENST00000398431 UBE3CQ15386 1083 aa14.52□□□□□ -0.09
TFF3-202ENST00000398431 FAM109BQ6ICB4 259 aaPredicted RBP14.52□□□□□ -0.09
TFF3-202ENST00000398431 NCAPG2Q86XI2 1143 aa14.52□□□□□ -0.09
TFF3-202ENST00000398431 MAML3Q96JK9 1138 aa14.52□□□□□ -0.09
TFF3-202ENST00000398431 LBHD1Q9BQE6 289 aaPredicted RBP14.52□□□□□ -0.09
TFF3-202ENST00000398431 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.52□□□□□ -0.09
TFF3-202ENST00000398431 BCL11AQ9H165 835 aa14.52□□□□□ -0.09
TFF3-202ENST00000398431 ARHGEF10LQ9HCE6 1279 aa14.52□□□□□ -0.09
TFF3-202ENST00000398431 FBXO28Q9NVF7 368 aa14.52□□□□□ -0.09
TFF3-202ENST00000398431 WDR46O15213 610 aaKnown RBP14.51□□□□□ -0.09
TFF3-202ENST00000398431 HMMRO75330 724 aa14.51□□□□□ -0.09
TFF3-202ENST00000398431 MS4A1P11836 297 aa14.51□□□□□ -0.09
TFF3-202ENST00000398431 SNX17Q15036 470 aa14.51□□□□□ -0.09
TFF3-202ENST00000398431 LRRC41Q15345 812 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms