RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 UBAC1Q9BSL1 405 aa22.36■■□□□ 1.17
AGAP3-202ENST00000397238 PATL2C9JE40 543 aaKnown RBP22.36■■□□□ 1.17
AGAP3-202ENST00000397238 COPB1P53618 953 aaKnown RBP22.36■■□□□ 1.17
AGAP3-202ENST00000397238 UBE3CQ15386 1083 aa22.36■■□□□ 1.17
AGAP3-202ENST00000397238 DNAJC21Q5F1R6 531 aaKnown RBP22.36■■□□□ 1.17
AGAP3-202ENST00000397238 TTLL11Q8NHH1 800 aa22.36■■□□□ 1.17
AGAP3-202ENST00000397238 EFCC1Q9HA90 598 aa22.36■■□□□ 1.17
AGAP3-202ENST00000397238 V9GY48 417 aaPredicted RBP22.36■■□□□ 1.17
AGAP3-202ENST00000397238 MICALL1Q8N3F8 863 aa22.35■■□□□ 1.17
AGAP3-202ENST00000397238 ARFGEF2Q9Y6D5 1785 aa22.35■■□□□ 1.17
AGAP3-202ENST00000397238 ZNF185O15231 689 aa22.35■■□□□ 1.17
AGAP3-202ENST00000397238 MAGEA9P43362 315 aa22.35■■□□□ 1.17
AGAP3-202ENST00000397238 ZNF654Q8IZM8 581 aa22.35■■□□□ 1.17
AGAP3-202ENST00000397238 ZNF579Q8NAF0 562 aaKnown RBP22.35■■□□□ 1.17
AGAP3-202ENST00000397238 SPATA20Q8TB22 786 aa22.35■■□□□ 1.17
AGAP3-202ENST00000397238 CRACR2AQ9BSW2 395 aa22.35■■□□□ 1.17
AGAP3-202ENST00000397238 RIPOR2Q9Y4F9 1068 aa22.35■■□□□ 1.17
AGAP3-202ENST00000397238 KIAA1328Q86T90 577 aa22.35■■□□□ 1.17
AGAP3-202ENST00000397238 ANKRD20A12PQ8NF67 263 aa22.35■■□□□ 1.17
AGAP3-202ENST00000397238 GNL3LQ9NVN8 582 aaKnown RBP22.35■■□□□ 1.17
AGAP3-202ENST00000397238 GDAQ9Y2T3 454 aa22.35■■□□□ 1.17
AGAP3-202ENST00000397238 TRIM49BA6NDI0 452 aa22.34■■□□□ 1.17
AGAP3-202ENST00000397238 KCNJ18B7U540 433 aa22.34■■□□□ 1.17
AGAP3-202ENST00000397238 SYF2O95926 243 aaKnown RBP22.34■■□□□ 1.17
AGAP3-202ENST00000397238 GGCXP38435 758 aa22.34■■□□□ 1.17
AGAP3-202ENST00000397238 MATR3P43243 847 aaKnown RBP eCLIP22.34■■□□□ 1.173e-6■■■■□ 20.3
AGAP3-202ENST00000397238 KCNJ12Q14500 433 aa22.34■■□□□ 1.17
AGAP3-202ENST00000397238 NELFBQ8WX92 580 aa22.34■■□□□ 1.17
AGAP3-202ENST00000397238 NDUFA10O95299 355 aa22.34■■□□□ 1.17
AGAP3-202ENST00000397238 PLIN2Q99541 437 aa22.34■■□□□ 1.17
AGAP3-202ENST00000397238 SIPA1L3O60292 1781 aaPredicted RBP22.34■■□□□ 1.17
AGAP3-202ENST00000397238 BAZ2BQ9UIF8 2168 aaKnown RBP22.33■■□□□ 1.17
AGAP3-202ENST00000397238 ANKRD18BA2A2Z9 1011 aa22.33■■□□□ 1.17
AGAP3-202ENST00000397238 IRX3P78415 501 aaPredicted RBP22.33■■□□□ 1.17
AGAP3-202ENST00000397238 STIM1Q13586 685 aa22.33■■□□□ 1.17
AGAP3-202ENST00000397238 ELOA2Q8IYF1 753 aaPredicted RBP22.33■■□□□ 1.17
AGAP3-202ENST00000397238 RASSF8Q8NHQ8 419 aa22.33■■□□□ 1.17
AGAP3-202ENST00000397238 KRT23Q9C075 422 aa22.33■■□□□ 1.17
AGAP3-202ENST00000397238 STK36Q9NRP7 1315 aa22.33■■□□□ 1.17
AGAP3-202ENST00000397238 TSR1Q2NL82 804 aaKnown RBP22.33■■□□□ 1.17
AGAP3-202ENST00000397238 LCORLQ8N3X6 602 aa22.33■■□□□ 1.17
AGAP3-202ENST00000397238 SHISA4Q96DD7 197 aa22.33■■□□□ 1.17
AGAP3-202ENST00000397238 EHD4Q9H223 541 aa22.33■■□□□ 1.17
AGAP3-202ENST00000397238 JADE2Q9NQC1 790 aa22.33■■□□□ 1.17
AGAP3-202ENST00000397238 JRKLQ9Y4A0 524 aa22.33■■□□□ 1.17
AGAP3-202ENST00000397238 TTC26A0AVF1 554 aa22.33■■□□□ 1.16
AGAP3-202ENST00000397238 MACROD2A1Z1Q3 448 aa22.33■■□□□ 1.16
AGAP3-202ENST00000397238 PTGDRQ13258 359 aa22.33■■□□□ 1.16
AGAP3-202ENST00000397238 E2F4Q16254 413 aa22.33■■□□□ 1.16
AGAP3-202ENST00000397238 PCMTD1Q96MG8 357 aaPredicted RBP22.33■■□□□ 1.16
AGAP3-202ENST00000397238 ISCA1Q9BUE6 129 aa22.33■■□□□ 1.16
AGAP3-202ENST00000397238 MED4Q9NPJ6 270 aa22.33■■□□□ 1.16
AGAP3-202ENST00000397238 MKRN1Q9UHC7 482 aaKnown RBP22.33■■□□□ 1.16
AGAP3-202ENST00000397238 REXO2Q9Y3B8 237 aaKnown RBP22.33■■□□□ 1.16
AGAP3-202ENST00000397238 SAR1BQ9Y6B6 198 aa22.33■■□□□ 1.16
AGAP3-202ENST00000397238 C4AP0C0L4 1744 aa22.33■■□□□ 1.16
AGAP3-202ENST00000397238 C4BP0C0L5 1744 aa22.33■■□□□ 1.16
AGAP3-202ENST00000397238 IL2RBP14784 551 aa22.32■■□□□ 1.16
AGAP3-202ENST00000397238 TUBB2AQ13885 445 aa22.32■■□□□ 1.16
AGAP3-202ENST00000397238 GSDMAQ96QA5 445 aa22.32■■□□□ 1.16
AGAP3-202ENST00000397238 TUBB2BQ9BVA1 445 aa22.32■■□□□ 1.16
AGAP3-202ENST00000397238 AATFQ9NY61 560 aaKnown RBP eCLIP22.32■■□□□ 1.167e-7■□□□□ 9.1
AGAP3-202ENST00000397238 TRPM3Q9HCF6 1732 aaPredicted RBP22.32■■□□□ 1.16
AGAP3-202ENST00000397238 GSG1L2A8MUP6 293 aa22.32■■□□□ 1.16
AGAP3-202ENST00000397238 MYBL2P10244 700 aa22.32■■□□□ 1.16
AGAP3-202ENST00000397238 MCM7P33993 719 aa22.32■■□□□ 1.16
AGAP3-202ENST00000397238 KIF6Q6ZMV9 814 aa22.32■■□□□ 1.16
AGAP3-202ENST00000397238 SDR42E1Q8WUS8 393 aa22.32■■□□□ 1.16
AGAP3-202ENST00000397238 PSMB7Q99436 277 aa22.32■■□□□ 1.16
AGAP3-202ENST00000397238 MYH8P13535 1937 aa22.32■■□□□ 1.16
AGAP3-202ENST00000397238 CCDC196A0A1B0GTZ2 297 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 KRT2P35908 639 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 USP14P54578 494 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 AMPD2Q01433 879 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 MAP3K12Q12852 859 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 PAK1Q13153 545 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 HLFQ16534 295 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 ICE2Q659A1 982 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 CCDC51Q96ER9 411 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 WDR17Q8IZU2 1322 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 CCT5P48643 541 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 CNNM2Q9H8M5 875 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 HPCAL4Q9UM19 191 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 DUSP10Q9Y6W6 482 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 XBP1P17861 261 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 TCP11X2Q5H9J9 407 aa22.31■■□□□ 1.16
AGAP3-202ENST00000397238 TCRBV5S4A2TA0A5A2 114 aa22.3■■□□□ 1.16
AGAP3-202ENST00000397238 PDE8BO95263 885 aa22.3■■□□□ 1.16
AGAP3-202ENST00000397238 PLEKHA8P1O95397 391 aa22.3■■□□□ 1.16
AGAP3-202ENST00000397238 LIG3P49916 1009 aa22.3■■□□□ 1.16
AGAP3-202ENST00000397238 CYP27A1Q02318 531 aa22.3■■□□□ 1.16
AGAP3-202ENST00000397238 PPARDQ03181 441 aa22.3■■□□□ 1.16
AGAP3-202ENST00000397238 C2orf54Q08AI8 447 aa22.3■■□□□ 1.16
AGAP3-202ENST00000397238 POLD4Q9HCU8 107 aa22.3■■□□□ 1.16
AGAP3-202ENST00000397238 LUC7L2Q9Y383 392 aaKnown RBP22.3■■□□□ 1.16
AGAP3-202ENST00000397238 SPATA5Q8NB90 893 aa22.3■■□□□ 1.16
AGAP3-202ENST00000397238 NACAP1Q9BZK3 213 aa22.3■■□□□ 1.16
AGAP3-202ENST00000397238 TRMT112Q9UI30 125 aaKnown RBP22.3■■□□□ 1.16
AGAP3-202ENST00000397238 XDHP47989 1333 aa22.3■■□□□ 1.16
AGAP3-202ENST00000397238 ZBTB38Q8NAP3 1195 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms