RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 SULF1Q8IWU6 871 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 LINC00301Q8NCQ3 95 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 BICD2Q8TD16 824 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 KLRG1Q96E93 195 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 MAP3K14Q99558 947 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 CLSTN2Q9H4D0 955 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 TCP11L1Q9NUJ3 509 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 MYH6P13533 1939 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 CTAGE5O15320 804 aa16.67■□□□□ 0.26
RTFDC1-203ENST00000395881 ADALQ6DHV7 355 aa16.67■□□□□ 0.26
RTFDC1-203ENST00000395881 CCDC144CPQ8IYA2 1237 aa16.67■□□□□ 0.26
RTFDC1-203ENST00000395881 ZNF408Q9H9D4 720 aa16.67■□□□□ 0.26
RTFDC1-203ENST00000395881 DACT1Q9NYF0 836 aa16.67■□□□□ 0.26
RTFDC1-203ENST00000395881 SPDYE2BA6NHP3 402 aa16.66■□□□□ 0.26
RTFDC1-203ENST00000395881 PPFIA3O75145 1194 aa16.66■□□□□ 0.26
RTFDC1-203ENST00000395881 SPDYE6P0CI01 402 aa16.66■□□□□ 0.26
RTFDC1-203ENST00000395881 CCDC192P0DO97 292 aa16.66■□□□□ 0.26
RTFDC1-203ENST00000395881 BTDP43251 543 aa16.66■□□□□ 0.26
RTFDC1-203ENST00000395881 SAFBQ15424 915 aaKnown RBP eCLIP16.66■□□□□ 0.26
RTFDC1-203ENST00000395881 OTUD7BQ6GQQ9 843 aa16.66■□□□□ 0.26
RTFDC1-203ENST00000395881 PDLIM2Q96JY6 352 aa16.66■□□□□ 0.26
RTFDC1-203ENST00000395881 SERPINA10Q9UK55 444 aa16.66■□□□□ 0.26
RTFDC1-203ENST00000395881 SMIM22K7EJ46 135 aa16.65■□□□□ 0.26
RTFDC1-203ENST00000395881 PRPF3O43395 683 aaKnown RBP16.65■□□□□ 0.26
RTFDC1-203ENST00000395881 CRKP46108 304 aa16.65■□□□□ 0.26
RTFDC1-203ENST00000395881 FUT2Q10981 343 aa16.65■□□□□ 0.26
RTFDC1-203ENST00000395881 ANO1Q5XXA6 986 aa16.65■□□□□ 0.26
RTFDC1-203ENST00000395881 CCDC73Q6ZRK6 1079 aa16.65■□□□□ 0.26
RTFDC1-203ENST00000395881 NUP133Q8WUM0 1156 aa16.65■□□□□ 0.26
RTFDC1-203ENST00000395881 CDCA5Q96FF9 252 aa16.65■□□□□ 0.26
RTFDC1-203ENST00000395881 TNMDQ9H2S6 317 aa16.65■□□□□ 0.26
RTFDC1-203ENST00000395881 FOXP1Q9H334 677 aaPredicted RBP16.65■□□□□ 0.26
RTFDC1-203ENST00000395881 TSPY2A6NKD2 308 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 KIF28PB7ZC32 967 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 PRDM1O75626 825 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 CAVIN2O95810 425 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 MMP1P03956 469 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 CYP2D6P10635 497 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 XBP1P17861 261 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 RBM5P52756 815 aaKnown RBP eCLIP16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 RHBDL3P58872 404 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 AKAP17AQ02040 695 aaKnown RBP16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 STK38Q15208 465 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 PRAMEF18Q5VWM3 479 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 STK11IPQ8N1F8 1099 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 JMYQ8N9B5 988 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 TGFBRAP1Q8WUH2 860 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 AIFM3Q96NN9 605 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 ABT1Q9ULW3 272 aaKnown RBP16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 CNTNAP1P78357 1384 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 RASSF10A6NK89 507 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 SPTLC2O15270 562 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 PPP6R2O75170 966 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 NR1I2O75469 434 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 POLR3DP05423 398 aaPredicted RBP16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 ME1P48163 572 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 HDLBPQ00341 1268 aaKnown RBP16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 CEBPZQ03701 1054 aaKnown RBP16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 FAM160A1Q05DH4 1040 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 GNL2Q13823 731 aaKnown RBP16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 SLC39A14Q15043 492 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 HS1BP3Q53T59 392 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 TMTC3Q6ZXV5 915 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 CCAR1Q8IX12 1150 aaKnown RBP16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 TEX11Q8IYF3 940 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 ENGASEQ8NFI3 743 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 CTCFLQ8NI51 663 aaPredicted RBP16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 MRIQ9BWK5 157 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 TLL2Q9Y6L7 1015 aa16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 MORC2Q9Y6X9 1032 aaPredicted RBP16.64■□□□□ 0.25
RTFDC1-203ENST00000395881 MYH1P12882 1939 aa16.63■□□□□ 0.25
RTFDC1-203ENST00000395881 CLRN2A0PK11 232 aa16.63■□□□□ 0.25
RTFDC1-203ENST00000395881 KIF5BP33176 963 aa16.63■□□□□ 0.25
RTFDC1-203ENST00000395881 SF3A1Q15459 793 aaKnown RBP16.63■□□□□ 0.25
RTFDC1-203ENST00000395881 DEFB115Q30KQ5 88 aa16.63■□□□□ 0.25
RTFDC1-203ENST00000395881 RCSD1Q6JBY9 416 aa16.63■□□□□ 0.25
RTFDC1-203ENST00000395881 APOBEC3FQ8IUX4 373 aaKnown RBP16.63■□□□□ 0.25
RTFDC1-203ENST00000395881 NOSTRINQ8IVI9 506 aa16.63■□□□□ 0.25
RTFDC1-203ENST00000395881 MRPS27Q92552 414 aaKnown RBP16.63■□□□□ 0.25
RTFDC1-203ENST00000395881 FTOQ9C0B1 505 aaKnown RBP eCLIP16.63■□□□□ 0.25
RTFDC1-203ENST00000395881 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.63■□□□□ 0.25
RTFDC1-203ENST00000395881 GJB4Q9NTQ9 266 aa16.63■□□□□ 0.25
RTFDC1-203ENST00000395881 PCDHA7Q9UN72 937 aa16.63■□□□□ 0.25
RTFDC1-203ENST00000395881 C16orf86Q6ZW13 317 aa16.62■□□□□ 0.25
RTFDC1-203ENST00000395881 SAPCD2Q86UD0 394 aa16.62■□□□□ 0.25
RTFDC1-203ENST00000395881 ZNF444Q8N0Y2 327 aaPredicted RBP16.62■□□□□ 0.25
RTFDC1-203ENST00000395881 TEKT1Q969V4 418 aa16.62■□□□□ 0.25
RTFDC1-203ENST00000395881 TDRD3Q9H7E2 651 aaKnown RBP16.62■□□□□ 0.25
RTFDC1-203ENST00000395881 MKNK2Q9HBH9 465 aa16.62■□□□□ 0.25
RTFDC1-203ENST00000395881 TAOK2Q9UL54 1235 aa16.62■□□□□ 0.25
RTFDC1-203ENST00000395881 CLIC4Q9Y696 253 aa16.62■□□□□ 0.25
RTFDC1-203ENST00000395881 FLT1P17948 1338 aa16.62■□□□□ 0.25
RTFDC1-203ENST00000395881 MYO1BO43795 1136 aa16.61■□□□□ 0.25
RTFDC1-203ENST00000395881 VEGFBP49765 207 aa16.61■□□□□ 0.25
RTFDC1-203ENST00000395881 TFAP4Q01664 338 aa16.61■□□□□ 0.25
RTFDC1-203ENST00000395881 SNW1Q13573 536 aaKnown RBP16.61■□□□□ 0.25
RTFDC1-203ENST00000395881 SPDYE2Q495Y8 402 aa16.61■□□□□ 0.25
RTFDC1-203ENST00000395881 RILPL1Q5EBL4 403 aa16.61■□□□□ 0.25
RTFDC1-203ENST00000395881 HHIPL2Q6UWX4 724 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms