RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 ICA1Q05084 483 aa21.69■■□□□ 1.06
CXCL12-204ENST00000395793 CCAR1Q8IX12 1150 aaKnown RBP21.69■■□□□ 1.06
CXCL12-204ENST00000395793 STRBPQ96SI9 672 aaKnown RBP21.69■■□□□ 1.06
CXCL12-204ENST00000395793 APBA2Q99767 749 aa21.69■■□□□ 1.06
CXCL12-204ENST00000395793 TMX2Q9Y320 296 aa21.69■■□□□ 1.06
CXCL12-204ENST00000395793 ZKSCAN1P17029 563 aaPredicted RBP21.68■■□□□ 1.06
CXCL12-204ENST00000395793 RGS2P41220 211 aa21.68■■□□□ 1.06
CXCL12-204ENST00000395793 RRP1P56182 461 aaKnown RBP21.68■■□□□ 1.06
CXCL12-204ENST00000395793 CACNB2Q08289 660 aaPredicted RBP21.68■■□□□ 1.06
CXCL12-204ENST00000395793 MAP2K5Q13163 448 aa21.68■■□□□ 1.06
CXCL12-204ENST00000395793 FLRT1Q9NZU1 646 aa21.68■■□□□ 1.06
CXCL12-204ENST00000395793 GSG1L2A8MUP6 293 aa21.67■■□□□ 1.06
CXCL12-204ENST00000395793 CAPN2P17655 700 aa21.67■■□□□ 1.06
CXCL12-204ENST00000395793 PTPREP23469 700 aa21.67■■□□□ 1.06
CXCL12-204ENST00000395793 CCND3P30281 292 aaPredicted RBP21.67■■□□□ 1.06
CXCL12-204ENST00000395793 CCNA1P78396 465 aa21.67■■□□□ 1.06
CXCL12-204ENST00000395793 CHRDL2Q6WN34 429 aa21.67■■□□□ 1.06
CXCL12-204ENST00000395793 APPBP2Q92624 585 aa21.67■■□□□ 1.06
CXCL12-204ENST00000395793 CCDC17Q96LX7 622 aa21.67■■□□□ 1.06
CXCL12-204ENST00000395793 TANGO6Q9C0B7 1094 aa21.67■■□□□ 1.06
CXCL12-204ENST00000395793 EPB41L4AQ9HCS5 686 aaPredicted RBP21.67■■□□□ 1.06
CXCL12-204ENST00000395793 M0R2C6 588 aa21.66■■□□□ 1.06
CXCL12-204ENST00000395793 FXR1P51114 621 aaKnown RBP eCLIP21.66■■□□□ 1.06
CXCL12-204ENST00000395793 COG2Q14746 738 aa21.66■■□□□ 1.06
CXCL12-204ENST00000395793 WDR78Q5VTH9 848 aa21.66■■□□□ 1.06
CXCL12-204ENST00000395793 SPICE1Q8N0Z3 855 aa21.66■■□□□ 1.06
CXCL12-204ENST00000395793 PI4K2BQ8TCG2 481 aa21.66■■□□□ 1.06
CXCL12-204ENST00000395793 GPATCH3Q96I76 525 aa21.66■■□□□ 1.06
CXCL12-204ENST00000395793 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.66■■□□□ 1.06
CXCL12-204ENST00000395793 VCPKMTQ9H867 229 aa21.66■■□□□ 1.06
CXCL12-204ENST00000395793 ARHGEF10LQ9HCE6 1279 aa21.66■■□□□ 1.06
CXCL12-204ENST00000395793 ARPP21Q9UBL0 812 aaPredicted RBP21.66■■□□□ 1.06
CXCL12-204ENST00000395793 OGDHLQ9ULD0 1010 aa21.66■■□□□ 1.06
CXCL12-204ENST00000395793 ROBO3Q96MS0 1386 aa21.65■■□□□ 1.06
CXCL12-204ENST00000395793 SLC15A5A6NIM6 579 aa21.65■■□□□ 1.06
CXCL12-204ENST00000395793 RNF113AO15541 343 aaKnown RBP21.65■■□□□ 1.06
CXCL12-204ENST00000395793 GRB14Q14449 540 aa21.65■■□□□ 1.06
CXCL12-204ENST00000395793 AMOTL1Q8IY63 956 aa21.65■■□□□ 1.06
CXCL12-204ENST00000395793 TRMT44Q8IYL2 757 aaKnown RBP21.65■■□□□ 1.06
CXCL12-204ENST00000395793 ANKLE1Q8NAG6 615 aa21.65■■□□□ 1.06
CXCL12-204ENST00000395793 NPLOC4Q8TAT6 608 aa21.65■■□□□ 1.06
CXCL12-204ENST00000395793 DDRGK1Q96HY6 314 aa21.65■■□□□ 1.06
CXCL12-204ENST00000395793 MOV10L1Q9BXT6 1211 aaKnown RBP21.65■■□□□ 1.06
CXCL12-204ENST00000395793 CWC22Q9HCG8 908 aaKnown RBP21.65■■□□□ 1.06
CXCL12-204ENST00000395793 GPAA1O43292 621 aa21.64■■□□□ 1.05
CXCL12-204ENST00000395793 EEF2P13639 858 aaKnown RBP21.64■■□□□ 1.05
CXCL12-204ENST00000395793 DSG3P32926 999 aa21.64■■□□□ 1.05
CXCL12-204ENST00000395793 SBK1Q52WX2 424 aa21.64■■□□□ 1.05
CXCL12-204ENST00000395793 NECAB2Q7Z6G3 386 aa21.64■■□□□ 1.05
CXCL12-204ENST00000395793 LPAR1Q92633 364 aa21.64■■□□□ 1.05
CXCL12-204ENST00000395793 ATG4CQ96DT6 458 aa21.64■■□□□ 1.05
CXCL12-204ENST00000395793 CRBNQ96SW2 442 aa21.64■■□□□ 1.05
CXCL12-204ENST00000395793 PRO3102Q9H379 93 aa21.64■■□□□ 1.05
CXCL12-204ENST00000395793 MYH4Q9Y623 1939 aa21.63■■□□□ 1.05
CXCL12-204ENST00000395793 TTC41PQ6P2S7 1318 aa21.63■■□□□ 1.05
CXCL12-204ENST00000395793 SALL3Q9BXA9 1300 aa21.63■■□□□ 1.05
CXCL12-204ENST00000395793 HOXC6P09630 235 aa21.63■■□□□ 1.05
CXCL12-204ENST00000395793 RASA1P20936 1047 aa21.63■■□□□ 1.05
CXCL12-204ENST00000395793 STK11IPQ8N1F8 1099 aa21.63■■□□□ 1.05
CXCL12-204ENST00000395793 SPATC1LQ9H0A9 340 aa21.63■■□□□ 1.05
CXCL12-204ENST00000395793 HOXC10Q9NYD6 342 aa21.63■■□□□ 1.05
CXCL12-204ENST00000395793 RBM27Q9P2N5 1060 aaKnown RBP21.63■■□□□ 1.05
CXCL12-204ENST00000395793 ZNFX1Q9P2E3 1918 aaKnown RBP21.63■■□□□ 1.05
CXCL12-204ENST00000395793 FLOT1O75955 427 aa21.62■■□□□ 1.05
CXCL12-204ENST00000395793 GLRX3O76003 335 aaKnown RBP21.62■■□□□ 1.05
CXCL12-204ENST00000395793 IGHA2P01877 340 aa21.62■■□□□ 1.05
CXCL12-204ENST00000395793 ATP2B2Q01814 1243 aa21.62■■□□□ 1.05
CXCL12-204ENST00000395793 LHX8Q68G74 356 aa21.62■■□□□ 1.05
CXCL12-204ENST00000395793 SEC62Q99442 399 aaKnown RBP21.62■■□□□ 1.05
CXCL12-204ENST00000395793 SH2D4AQ9H788 454 aa21.62■■□□□ 1.05
CXCL12-204ENST00000395793 FBXO28Q9NVF7 368 aa21.62■■□□□ 1.05
CXCL12-204ENST00000395793 NR2E3Q9Y5X4 410 aa21.62■■□□□ 1.05
CXCL12-204ENST00000395793 PFASO15067 1338 aa21.61■■□□□ 1.05
CXCL12-204ENST00000395793 WDR46O15213 610 aaKnown RBP21.61■■□□□ 1.05
CXCL12-204ENST00000395793 EVI5O60447 810 aa21.61■■□□□ 1.05
CXCL12-204ENST00000395793 ZFYP08048 801 aaPredicted RBP21.61■■□□□ 1.05
CXCL12-204ENST00000395793 ERCC3P19447 782 aa21.61■■□□□ 1.05
CXCL12-204ENST00000395793 GIMAP6Q6P9H5 292 aa21.61■■□□□ 1.05
CXCL12-204ENST00000395793 KANSL2Q9H9L4 492 aa21.61■■□□□ 1.05
CXCL12-204ENST00000395793 IVNS1ABPQ9Y6Y0 642 aa21.61■■□□□ 1.05
CXCL12-204ENST00000395793 MINDY4BA8MYZ0 360 aa21.6■■□□□ 1.05
CXCL12-204ENST00000395793 SHCBP1Q8NEM2 672 aa21.6■■□□□ 1.05
CXCL12-204ENST00000395793 NBPF3Q9H094 633 aa21.6■■□□□ 1.05
CXCL12-204ENST00000395793 RANBP2P49792 3224 aaKnown RBP21.6■■□□□ 1.05
CXCL12-204ENST00000395793 ADORA2AP29274 412 aa21.59■■□□□ 1.05
CXCL12-204ENST00000395793 CYP2C19P33261 490 aa21.59■■□□□ 1.05
CXCL12-204ENST00000395793 SAMD1Q6SPF0 538 aaPredicted RBP21.59■■□□□ 1.05
CXCL12-204ENST00000395793 MB21D1Q8N884 522 aa21.59■■□□□ 1.05
CXCL12-204ENST00000395793 TRPV1Q8NER1 839 aa21.59■■□□□ 1.05
CXCL12-204ENST00000395793 C11orf49Q9H6J7 331 aa21.59■■□□□ 1.05
CXCL12-204ENST00000395793 ERC2O15083 957 aa21.58■■□□□ 1.05
CXCL12-204ENST00000395793 COBLO75128 1261 aa21.58■■□□□ 1.05
CXCL12-204ENST00000395793 COL6A1P12109 1028 aa21.58■■□□□ 1.05
CXCL12-204ENST00000395793 MX1P20591 662 aa21.58■■□□□ 1.05
CXCL12-204ENST00000395793 PLS1Q14651 629 aa21.58■■□□□ 1.05
CXCL12-204ENST00000395793 TMEM132BQ14DG7 1078 aa21.58■■□□□ 1.05
CXCL12-204ENST00000395793 FAM83BQ5T0W9 1011 aa21.58■■□□□ 1.05
CXCL12-204ENST00000395793 MFSD14CQ5VZR4 134 aa21.58■■□□□ 1.05
CXCL12-204ENST00000395793 ADAMTS5Q9UNA0 930 aa21.58■■□□□ 1.05
CXCL12-204ENST00000395793 PLXNA1Q9UIW2 1896 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms