RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 FAM129BQ96TA1 746 aa7.9□□□□□ -1.14
AP3S1-202ENST00000395548 LIN7BQ9HAP6 207 aa7.9□□□□□ -1.14
AP3S1-202ENST00000395548 PIM2Q9P1W9 311 aa7.9□□□□□ -1.14
AP3S1-202ENST00000395548 PPIP5K1Q6PFW1 1433 aa7.89□□□□□ -1.15
AP3S1-202ENST00000395548 A0A096LPE4 126 aa7.89□□□□□ -1.15
AP3S1-202ENST00000395548 A0A1W2PPZ6 126 aa7.89□□□□□ -1.15
AP3S1-202ENST00000395548 IGLV1-40P01703 118 aa7.89□□□□□ -1.15
AP3S1-202ENST00000395548 DPEP1P16444 411 aa7.89□□□□□ -1.15
AP3S1-202ENST00000395548 LMNB1P20700 586 aa7.89□□□□□ -1.15
AP3S1-202ENST00000395548 DALRD3Q5D0E6 543 aaKnown RBP7.89□□□□□ -1.15
AP3S1-202ENST00000395548 KIAA0319Q5VV43 1072 aa7.89□□□□□ -1.15
AP3S1-202ENST00000395548 HGSNATQ68CP4 663 aa7.89□□□□□ -1.15
AP3S1-202ENST00000395548 USP26Q9BXU7 913 aa7.89□□□□□ -1.15
AP3S1-202ENST00000395548 DNAJC25Q9H1X3 360 aa7.89□□□□□ -1.15
AP3S1-202ENST00000395548 HIF3AQ9Y2N7 669 aa7.89□□□□□ -1.15
AP3S1-202ENST00000395548 KAT6BQ8WYB5 2073 aa7.88□□□□□ -1.15
AP3S1-202ENST00000395548 VPS8Q8N3P4 1428 aa7.88□□□□□ -1.15
AP3S1-202ENST00000395548 METTL12A8MUP2 240 aa7.88□□□□□ -1.15
AP3S1-202ENST00000395548 HYAL3O43820 417 aaPredicted RBP7.88□□□□□ -1.15
AP3S1-202ENST00000395548 GSTM4Q03013 218 aa7.88□□□□□ -1.15
AP3S1-202ENST00000395548 CLEC10AQ8IUN9 316 aa7.88□□□□□ -1.15
AP3S1-202ENST00000395548 CLEC4MQ9H2X3 399 aaPredicted RBP7.88□□□□□ -1.15
AP3S1-202ENST00000395548 CYP4F12Q9HCS2 524 aa7.88□□□□□ -1.15
AP3S1-202ENST00000395548 PPLO60437 1756 aa7.87□□□□□ -1.15
AP3S1-202ENST00000395548 POLR3AO14802 1390 aaPredicted RBP7.87□□□□□ -1.15
AP3S1-202ENST00000395548 GAS2O43903 313 aaKnown RBP7.87□□□□□ -1.15
AP3S1-202ENST00000395548 BRD1O95696 1058 aa7.87□□□□□ -1.15
AP3S1-202ENST00000395548 BMP3P12645 472 aa7.87□□□□□ -1.15
AP3S1-202ENST00000395548 IL2RBP14784 551 aa7.87□□□□□ -1.15
AP3S1-202ENST00000395548 PREPP48147 710 aa7.87□□□□□ -1.15
AP3S1-202ENST00000395548 PCDH1Q08174 1060 aa7.87□□□□□ -1.15
AP3S1-202ENST00000395548 USPL1Q5W0Q7 1092 aa7.87□□□□□ -1.15
AP3S1-202ENST00000395548 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.87□□□□□ -1.15
AP3S1-202ENST00000395548 LDHDQ86WU2 507 aa7.87□□□□□ -1.15
AP3S1-202ENST00000395548 FAM20CQ8IXL6 584 aa7.87□□□□□ -1.15
AP3S1-202ENST00000395548 C12orf50Q8NA57 414 aaPredicted RBP7.87□□□□□ -1.15
AP3S1-202ENST00000395548 DDX54Q8TDD1 881 aaKnown RBP7.87□□□□□ -1.15
AP3S1-202ENST00000395548 DMRTB1Q96MA1 342 aa7.87□□□□□ -1.15
AP3S1-202ENST00000395548 GPR101Q96P66 508 aaPredicted RBP7.87□□□□□ -1.15
AP3S1-202ENST00000395548 TCF12Q99081 682 aa7.87□□□□□ -1.15
AP3S1-202ENST00000395548 FAM83CQ9BQN1 747 aa7.87□□□□□ -1.15
AP3S1-202ENST00000395548 EHD4Q9H223 541 aa7.87□□□□□ -1.15
AP3S1-202ENST00000395548 C7orf69Q9H7B7 122 aa7.87□□□□□ -1.15
AP3S1-202ENST00000395548 ABT1Q9ULW3 272 aaKnown RBP7.87□□□□□ -1.15
AP3S1-202ENST00000395548 USP47Q96K76 1375 aa7.86□□□□□ -1.15
AP3S1-202ENST00000395548 LOC100289279A0A1B0GTE1 492 aa7.86□□□□□ -1.15
AP3S1-202ENST00000395548 LOC105371045A0A1W2PR82 267 aa7.86□□□□□ -1.15
AP3S1-202ENST00000395548 MMP10P09238 476 aa7.86□□□□□ -1.15
AP3S1-202ENST00000395548 MAP2K2P36507 400 aa7.86□□□□□ -1.15
AP3S1-202ENST00000395548 GRIA4P48058 902 aa7.86□□□□□ -1.15
AP3S1-202ENST00000395548 ORC1Q13415 861 aa7.86□□□□□ -1.15
AP3S1-202ENST00000395548 EXOSC6Q5RKV6 272 aaKnown RBP7.86□□□□□ -1.15
AP3S1-202ENST00000395548 RNF43Q68DV7 783 aa7.86□□□□□ -1.15
AP3S1-202ENST00000395548 TRIM42Q8IWZ5 723 aa7.86□□□□□ -1.15
AP3S1-202ENST00000395548 SMG8Q8ND04 991 aaKnown RBP7.86□□□□□ -1.15
AP3S1-202ENST00000395548 TMPRSS13Q9BYE2 586 aa7.86□□□□□ -1.15
AP3S1-202ENST00000395548 RBCK1Q9BYM8 510 aa7.86□□□□□ -1.15
AP3S1-202ENST00000395548 NIF3L1Q9GZT8 377 aa7.86□□□□□ -1.15
AP3S1-202ENST00000395548 KCNF1Q9H3M0 494 aa7.86□□□□□ -1.15
AP3S1-202ENST00000395548 SUGCTQ9HAC7 445 aa7.86□□□□□ -1.15
AP3S1-202ENST00000395548 ZFYVE1Q9HBF4 777 aa7.86□□□□□ -1.15
AP3S1-202ENST00000395548 SOWAHDA6NJG2 315 aa7.85□□□□□ -1.15
AP3S1-202ENST00000395548 EIF1AYO14602 144 aaKnown RBP7.85□□□□□ -1.15
AP3S1-202ENST00000395548 CYP11A1P05108 521 aa7.85□□□□□ -1.15
AP3S1-202ENST00000395548 NFIAQ12857 509 aa7.85□□□□□ -1.15
AP3S1-202ENST00000395548 SPRED3Q2MJR0 410 aa7.85□□□□□ -1.15
AP3S1-202ENST00000395548 HP1BP3Q5SSJ5 553 aaPredicted RBP7.85□□□□□ -1.15
AP3S1-202ENST00000395548 BEND4Q6ZU67 534 aa7.85□□□□□ -1.15
AP3S1-202ENST00000395548 CAPNS2Q96L46 248 aa7.85□□□□□ -1.15
AP3S1-202ENST00000395548 GNEQ9Y223 722 aaKnown RBP7.85□□□□□ -1.15
AP3S1-202ENST00000395548 ITSN1Q15811 1721 aa7.85□□□□□ -1.15
AP3S1-202ENST00000395548 ANKRD36BQ8N2N9 1353 aa7.84□□□□□ -1.15
AP3S1-202ENST00000395548 ACEP12821 1306 aa7.84□□□□□ -1.15
AP3S1-202ENST00000395548 LY75O60449 1722 aa7.84□□□□□ -1.15
AP3S1-202ENST00000395548 HMX2A2RU54 273 aa7.84□□□□□ -1.15
AP3S1-202ENST00000395548 IQCA1LA6NCM1 817 aa7.84□□□□□ -1.15
AP3S1-202ENST00000395548 FAM50AQ14320 339 aaKnown RBP7.84□□□□□ -1.15
AP3S1-202ENST00000395548 ZNF423Q2M1K9 1284 aa7.84□□□□□ -1.15
AP3S1-202ENST00000395548 CCDC74AQ96AQ1 378 aa7.84□□□□□ -1.15
AP3S1-202ENST00000395548 DBNDD2Q9BQY9 259 aa7.84□□□□□ -1.15
AP3S1-202ENST00000395548 NPHS2Q9NP85 383 aa7.84□□□□□ -1.15
AP3S1-202ENST00000395548 BIN2Q9UBW5 565 aaPredicted RBP7.84□□□□□ -1.15
AP3S1-202ENST00000395548 ARFGEF1Q9Y6D6 1849 aa7.84□□□□□ -1.15
AP3S1-202ENST00000395548 KDM6AO15550 1401 aaPredicted RBP7.84□□□□□ -1.15
AP3S1-202ENST00000395548 ADAMTS7Q9UKP4 1686 aa7.83□□□□□ -1.16
AP3S1-202ENST00000395548 GPR182O15218 404 aa7.83□□□□□ -1.16
AP3S1-202ENST00000395548 KCNA3P22001 575 aa7.83□□□□□ -1.16
AP3S1-202ENST00000395548 PTPN12Q05209 780 aaKnown RBP7.83□□□□□ -1.16
AP3S1-202ENST00000395548 NLGN1Q8N2Q7 840 aa7.83□□□□□ -1.16
AP3S1-202ENST00000395548 ALKBH8Q96BT7 664 aaKnown RBP7.83□□□□□ -1.16
AP3S1-202ENST00000395548 TRAIPQ9BWF2 469 aa7.83□□□□□ -1.16
AP3S1-202ENST00000395548 KRTAP4-8Q9BYQ9 185 aa7.83□□□□□ -1.16
AP3S1-202ENST00000395548 C14orf93Q9H972 538 aaKnown RBP7.83□□□□□ -1.16
AP3S1-202ENST00000395548 PCMTD2Q9NV79 361 aa7.83□□□□□ -1.16
AP3S1-202ENST00000395548 TRAK1Q9UPV9 953 aa7.83□□□□□ -1.16
AP3S1-202ENST00000395548 N4BP2Q86UW6 1770 aaPredicted RBP7.83□□□□□ -1.16
AP3S1-202ENST00000395548 PIK3C2GO75747 1445 aa7.83□□□□□ -1.16
AP3S1-202ENST00000395548 COL6A3P12111 3177 aa7.83□□□□□ -1.16
AP3S1-202ENST00000395548 ROCK1Q13464 1354 aa7.83□□□□□ -1.16
AP3S1-202ENST00000395548 KIF13BQ9NQT8 1826 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms