RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 GJD2Q9UKL4 321 aa16.68■□□□□ 0.26
HLA-DMA-203ENST00000395305 POTEFA5A3E0 1075 aa16.67■□□□□ 0.26
HLA-DMA-203ENST00000395305 FOXP2O15409 715 aa16.67■□□□□ 0.26
HLA-DMA-203ENST00000395305 ADCY3O60266 1144 aa16.67■□□□□ 0.26
HLA-DMA-203ENST00000395305 ERVK-9P63128 1117 aa16.67■□□□□ 0.26
HLA-DMA-203ENST00000395305 ERVK-24P63145 666 aa16.67■□□□□ 0.26
HLA-DMA-203ENST00000395305 PDE4BQ07343 736 aa16.67■□□□□ 0.26
HLA-DMA-203ENST00000395305 KIAA1755Q5JYT7 1200 aa16.67■□□□□ 0.26
HLA-DMA-203ENST00000395305 PXYLP1Q8TE99 480 aa16.67■□□□□ 0.26
HLA-DMA-203ENST00000395305 FAM227BQ96M60 508 aa16.67■□□□□ 0.26
HLA-DMA-203ENST00000395305 VCPKMTQ9H867 229 aa16.67■□□□□ 0.26
HLA-DMA-203ENST00000395305 PEX10O60683 326 aa16.66■□□□□ 0.26
HLA-DMA-203ENST00000395305 SDSP20132 328 aa16.66■□□□□ 0.26
HLA-DMA-203ENST00000395305 MAPK4P31152 587 aa16.66■□□□□ 0.26
HLA-DMA-203ENST00000395305 ATP2B2Q01814 1243 aa16.66■□□□□ 0.26
HLA-DMA-203ENST00000395305 PPARAQ07869 468 aa16.66■□□□□ 0.26
HLA-DMA-203ENST00000395305 CLEC10AQ8IUN9 316 aa16.66■□□□□ 0.26
HLA-DMA-203ENST00000395305 PAGR1Q9BTK6 254 aa16.66■□□□□ 0.26
HLA-DMA-203ENST00000395305 NYAP2Q9P242 653 aa16.66■□□□□ 0.26
HLA-DMA-203ENST00000395305 BIN2Q9UBW5 565 aaPredicted RBP16.66■□□□□ 0.26
HLA-DMA-203ENST00000395305 A0A0D9SFI3 127 aa16.65■□□□□ 0.26
HLA-DMA-203ENST00000395305 CNMDO75829 334 aa16.65■□□□□ 0.26
HLA-DMA-203ENST00000395305 UBXN2AP68543 259 aa16.65■□□□□ 0.26
HLA-DMA-203ENST00000395305 CCNA1P78396 465 aa16.65■□□□□ 0.26
HLA-DMA-203ENST00000395305 NMIQ13287 307 aaPredicted RBP16.65■□□□□ 0.26
HLA-DMA-203ENST00000395305 VPS53Q5VIR6 699 aa16.65■□□□□ 0.26
HLA-DMA-203ENST00000395305 CCAR1Q8IX12 1150 aaKnown RBP16.65■□□□□ 0.26
HLA-DMA-203ENST00000395305 TANGO6Q9C0B7 1094 aa16.65■□□□□ 0.26
HLA-DMA-203ENST00000395305 GOPCQ9HD26 462 aa16.65■□□□□ 0.26
HLA-DMA-203ENST00000395305 ANAPC4Q9UJX5 808 aa16.65■□□□□ 0.26
HLA-DMA-203ENST00000395305 IGKV6D-41A0A0C4DH26 115 aa16.64■□□□□ 0.25
HLA-DMA-203ENST00000395305 SPDYE16A6NNV3 312 aaPredicted RBP16.64■□□□□ 0.25
HLA-DMA-203ENST00000395305 WDR46O15213 610 aaKnown RBP16.64■□□□□ 0.25
HLA-DMA-203ENST00000395305 PRDM1O75626 825 aa16.64■□□□□ 0.25
HLA-DMA-203ENST00000395305 EN2P19622 333 aaPredicted RBP16.64■□□□□ 0.25
HLA-DMA-203ENST00000395305 MFAP1P55081 439 aaKnown RBP16.64■□□□□ 0.25
HLA-DMA-203ENST00000395305 SPICE1Q8N0Z3 855 aa16.64■□□□□ 0.25
HLA-DMA-203ENST00000395305 NEDD1Q8NHV4 660 aa16.64■□□□□ 0.25
HLA-DMA-203ENST00000395305 MKL1Q969V6 931 aa16.64■□□□□ 0.25
HLA-DMA-203ENST00000395305 HIP1O00291 1037 aa16.63■□□□□ 0.25
HLA-DMA-203ENST00000395305 MYCP01106 439 aaPredicted RBP16.63■□□□□ 0.25
HLA-DMA-203ENST00000395305 FGAP02671 866 aa16.63■□□□□ 0.25
HLA-DMA-203ENST00000395305 HSPD1P10809 573 aaKnown RBP16.63■□□□□ 0.25
HLA-DMA-203ENST00000395305 PDE4AP27815 886 aa16.63■□□□□ 0.25
HLA-DMA-203ENST00000395305 DSG3P32926 999 aa16.63■□□□□ 0.25
HLA-DMA-203ENST00000395305 TFAP4Q01664 338 aa16.63■□□□□ 0.25
HLA-DMA-203ENST00000395305 MTFR1Q15390 333 aa16.63■□□□□ 0.25
HLA-DMA-203ENST00000395305 PLEKHH3Q7Z736 793 aa16.63■□□□□ 0.25
HLA-DMA-203ENST00000395305 NUDT12Q9BQG2 462 aa16.63■□□□□ 0.25
HLA-DMA-203ENST00000395305 PORCNQ9H237 461 aa16.63■□□□□ 0.25
HLA-DMA-203ENST00000395305 MTMR4Q9NYA4 1195 aa16.63■□□□□ 0.25
HLA-DMA-203ENST00000395305 BTBD7Q9P203 1132 aa16.63■□□□□ 0.25
HLA-DMA-203ENST00000395305 CLIP2Q9UDT6 1046 aa16.63■□□□□ 0.25
HLA-DMA-203ENST00000395305 XRCC5P13010 732 aaKnown RBP16.62■□□□□ 0.25
HLA-DMA-203ENST00000395305 CCL5P13501 91 aa16.62■□□□□ 0.25
HLA-DMA-203ENST00000395305 ELNP15502 786 aa16.62■□□□□ 0.25
HLA-DMA-203ENST00000395305 CTDSPL2Q05D32 466 aa16.62■□□□□ 0.25
HLA-DMA-203ENST00000395305 ZNF589Q86UQ0 364 aaPredicted RBP16.62■□□□□ 0.25
HLA-DMA-203ENST00000395305 MB21D1Q8N884 522 aa16.62■□□□□ 0.25
HLA-DMA-203ENST00000395305 USP6NLQ92738 828 aa16.62■□□□□ 0.25
HLA-DMA-203ENST00000395305 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
HLA-DMA-203ENST00000395305 RBBP6Q7Z6E9 1792 aaKnown RBP16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 F5H6K3 240 aa16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 FLOT1O75955 427 aa16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 TTLL1O95922 423 aa16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 TSPY3P0CV98 308 aa16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 TSPY8P0CW00 308 aa16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 KLRC3Q07444 240 aa16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 MORN1Q5T089 497 aa16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 GPR142Q7Z601 462 aa16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 SOCS4Q8WXH5 440 aa16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 CEP95Q96GE4 821 aa16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 RNF208Q9H0X6 261 aa16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 SYNPO2Q9UMS6 1093 aa16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 ADAMTS5Q9UNA0 930 aa16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 CCDC171Q6TFL3 1326 aa16.61■□□□□ 0.25
HLA-DMA-203ENST00000395305 RLFQ13129 1914 aa16.6■□□□□ 0.25
HLA-DMA-203ENST00000395305 INHAP05111 366 aa16.6■□□□□ 0.25
HLA-DMA-203ENST00000395305 GJB1P08034 283 aa16.6■□□□□ 0.25
HLA-DMA-203ENST00000395305 FGRP09769 529 aa16.6■□□□□ 0.25
HLA-DMA-203ENST00000395305 CAPN2P17655 700 aa16.6■□□□□ 0.25
HLA-DMA-203ENST00000395305 CYP2B6P20813 491 aa16.6■□□□□ 0.25
HLA-DMA-203ENST00000395305 FAM47AQ5JRC9 791 aa16.6■□□□□ 0.25
HLA-DMA-203ENST00000395305 PPP4R3BQ5MIZ7 849 aa16.6■□□□□ 0.25
HLA-DMA-203ENST00000395305 TRMT44Q8IYL2 757 aaKnown RBP16.6■□□□□ 0.25
HLA-DMA-203ENST00000395305 NKX2-3Q8TAU0 364 aa16.6■□□□□ 0.25
HLA-DMA-203ENST00000395305 CWC22Q9HCG8 908 aaKnown RBP16.6■□□□□ 0.25
HLA-DMA-203ENST00000395305 INCENPQ9NQS7 918 aa16.6■□□□□ 0.25
HLA-DMA-203ENST00000395305 DIAPH3Q9NSV4 1193 aa16.6■□□□□ 0.25
HLA-DMA-203ENST00000395305 ZMYM6O95789 1325 aa16.6■□□□□ 0.25
HLA-DMA-203ENST00000395305 PLIN4Q96Q06 1357 aa16.6■□□□□ 0.25
HLA-DMA-203ENST00000395305 PLXNB2O15031 1838 aa16.59■□□□□ 0.25
HLA-DMA-203ENST00000395305 BRCA2P51587 3418 aa16.59■□□□□ 0.25
HLA-DMA-203ENST00000395305 SLC15A5A6NIM6 579 aa16.59■□□□□ 0.25
HLA-DMA-203ENST00000395305 ORC4O43929 436 aa16.59■□□□□ 0.25
HLA-DMA-203ENST00000395305 RAD21O60216 631 aa16.59■□□□□ 0.25
HLA-DMA-203ENST00000395305 PTPREP23469 700 aa16.59■□□□□ 0.25
HLA-DMA-203ENST00000395305 GJA8P48165 433 aa16.59■□□□□ 0.25
HLA-DMA-203ENST00000395305 FAM83BQ5T0W9 1011 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms