RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 CUTAO60888 179 aa18.08■□□□□ 0.49
SMARCD1-202ENST00000394963 FMR1NBQ8N0W7 255 aaPredicted RBP18.08■□□□□ 0.49
SMARCD1-202ENST00000394963 NFE2L3Q9Y4A8 694 aa18.08■□□□□ 0.49
SMARCD1-202ENST00000394963 USP17L5A8MUK1 530 aa18.08■□□□□ 0.48
SMARCD1-202ENST00000394963 SEMA3EO15041 775 aa18.08■□□□□ 0.48
SMARCD1-202ENST00000394963 POSTNQ15063 836 aa18.08■□□□□ 0.48
SMARCD1-202ENST00000394963 SLC10A5Q5PT55 438 aa18.08■□□□□ 0.48
SMARCD1-202ENST00000394963 DTHD1Q6ZMT9 781 aa18.08■□□□□ 0.48
SMARCD1-202ENST00000394963 TCP11L1Q9NUJ3 509 aa18.08■□□□□ 0.48
SMARCD1-202ENST00000394963 MROH7-TTC4A0A0A0MT08 1334 aa18.08■□□□□ 0.48
SMARCD1-202ENST00000394963 AGXT2Q9BYV1 514 aa18.08■□□□□ 0.48
SMARCD1-202ENST00000394963 ARFGEF2Q9Y6D5 1785 aa18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 NTRK3Q16288 839 aa18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 BCL9LQ86UU0 1499 aa18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 PRR29P0C7W0 189 aa18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 TECP42680 631 aa18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 SLC1A4P43007 532 aa18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 NFIAQ12857 509 aa18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 BLIDQ8IZY5 108 aa18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 NUP88Q99567 741 aaPredicted RBP18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 RNF26Q9BY78 433 aaPredicted RBP18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 PDGFDQ9GZP0 370 aaPredicted RBP18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 POLD4Q9HCU8 107 aa18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 C12orf60Q5U649 245 aa18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 ATL3Q6DD88 541 aa18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 TMTC3Q6ZXV5 915 aa18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 DYMQ7RTS9 669 aa18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 ANKRD20A12PQ8NF67 263 aa18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 TANGO6Q9C0B7 1094 aa18.07■□□□□ 0.48
SMARCD1-202ENST00000394963 SNW1Q13573 536 aaKnown RBP18.06■□□□□ 0.48
SMARCD1-202ENST00000394963 KRBA2Q6ZNG9 492 aa18.06■□□□□ 0.48
SMARCD1-202ENST00000394963 TBC1D22AQ8WUA7 517 aa18.06■□□□□ 0.48
SMARCD1-202ENST00000394963 GJA10Q969M2 543 aa18.06■□□□□ 0.48
SMARCD1-202ENST00000394963 PHLPP1O60346 1717 aa18.06■□□□□ 0.48
SMARCD1-202ENST00000394963 PARP4Q9UKK3 1724 aaKnown RBP18.06■□□□□ 0.48
SMARCD1-202ENST00000394963 SERPINB13Q9UIV8 391 aa18.06■□□□□ 0.48
SMARCD1-202ENST00000394963 AKR1B1P15121 316 aa18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 GNAQP50148 359 aa18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 FANCCQ00597 558 aa18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 ZNF772Q68DY9 489 aaPredicted RBP18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 CCDC84Q86UT8 332 aaPredicted RBP18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 TDRD7Q8NHU6 1098 aaKnown RBP18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 VPS16Q9H269 839 aa18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 ZNF277Q9NRM2 450 aaPredicted RBP18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 DAGLAQ9Y4D2 1042 aa18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 TM4SF1P30408 202 aa18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 PDE4CQ08493 712 aa18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 UBE2SQ16763 222 aa18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 C6orf50Q9HD87 102 aa18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 CALML3P27482 149 aa18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 TROAPQ12815 778 aa18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 CACTINQ8WUQ7 758 aaKnown RBP18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 CCDC47Q96A33 483 aaKnown RBP18.05■□□□□ 0.48
SMARCD1-202ENST00000394963 UBXN2AP68543 259 aa18.04■□□□□ 0.48
SMARCD1-202ENST00000394963 ASIC1P78348 528 aa18.04■□□□□ 0.48
SMARCD1-202ENST00000394963 TTBK2Q6IQ55 1244 aa18.04■□□□□ 0.48
SMARCD1-202ENST00000394963 PPFIBP1Q86W92 1011 aa18.04■□□□□ 0.48
SMARCD1-202ENST00000394963 TBC1D7Q9P0N9 293 aa18.04■□□□□ 0.48
SMARCD1-202ENST00000394963 TPM1P09493 284 aa18.04■□□□□ 0.48
SMARCD1-202ENST00000394963 MYL5Q02045 173 aa18.04■□□□□ 0.48
SMARCD1-202ENST00000394963 ZSWIM4Q9H7M6 989 aa18.04■□□□□ 0.48
SMARCD1-202ENST00000394963 TMEM260Q9NX78 707 aa18.04■□□□□ 0.48
SMARCD1-202ENST00000394963 CTNND2Q9UQB3 1225 aa18.04■□□□□ 0.48
SMARCD1-202ENST00000394963 BCS1LQ9Y276 419 aa18.04■□□□□ 0.48
SMARCD1-202ENST00000394963 NLRP12P59046 1061 aa18.04■□□□□ 0.48
SMARCD1-202ENST00000394963 PTPN14Q15678 1187 aa18.04■□□□□ 0.48
SMARCD1-202ENST00000394963 CCDC144BQ3MJ40 725 aa18.04■□□□□ 0.48
SMARCD1-202ENST00000394963 FILIP1LQ4L180 1135 aa18.04■□□□□ 0.48
SMARCD1-202ENST00000394963 N4BP3O15049 544 aa18.03■□□□□ 0.48
SMARCD1-202ENST00000394963 CCDC148Q8NFR7 591 aa18.03■□□□□ 0.48
SMARCD1-202ENST00000394963 TAL1P17542 331 aaPredicted RBP18.03■□□□□ 0.48
SMARCD1-202ENST00000394963 TSR1Q2NL82 804 aaKnown RBP18.03■□□□□ 0.48
SMARCD1-202ENST00000394963 NPR1P16066 1061 aa18.03■□□□□ 0.48
SMARCD1-202ENST00000394963 ADKP55263 362 aaKnown RBP18.03■□□□□ 0.48
SMARCD1-202ENST00000394963 CPXCR1Q8N123 301 aa18.03■□□□□ 0.48
SMARCD1-202ENST00000394963 HOMER2Q9NSB8 354 aa18.03■□□□□ 0.48
SMARCD1-202ENST00000394963 FLT1P17948 1338 aa18.02■□□□□ 0.48
SMARCD1-202ENST00000394963 IQUBQ8NA54 791 aa18.02■□□□□ 0.48
SMARCD1-202ENST00000394963 FOXP1Q9H334 677 aaPredicted RBP18.02■□□□□ 0.48
SMARCD1-202ENST00000394963 POLRMTO00411 1230 aaKnown RBP18.02■□□□□ 0.48
SMARCD1-202ENST00000394963 ADRA2BP18089 450 aa18.02■□□□□ 0.48
SMARCD1-202ENST00000394963 TOB1P50616 345 aaPredicted RBP18.02■□□□□ 0.48
SMARCD1-202ENST00000394963 DACH1Q9UI36 760 aa18.02■□□□□ 0.48
SMARCD1-202ENST00000394963 CERKLQ49MI3 558 aaPredicted RBP18.02■□□□□ 0.47
SMARCD1-202ENST00000394963 SLC27A3Q5K4L6 730 aa18.02■□□□□ 0.47
SMARCD1-202ENST00000394963 CCDC174Q6PII3 467 aa18.02■□□□□ 0.47
SMARCD1-202ENST00000394963 PROM2Q8N271 834 aa18.02■□□□□ 0.47
SMARCD1-202ENST00000394963 MASTLQ96GX5 879 aa18.02■□□□□ 0.47
SMARCD1-202ENST00000394963 SAMSN1Q9NSI8 373 aaKnown RBP18.02■□□□□ 0.47
SMARCD1-202ENST00000394963 A0A1W2PQ27 194 aa18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 A0A1W2PQ64 194 aa18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 A0A1W2PQD8 194 aa18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 PSDA5PKW4 1024 aaPredicted RBP18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 SHROOM1Q2M3G4 852 aaPredicted RBP18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 IL17RAQ96F46 866 aa18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 TRIM47Q96LD4 638 aa18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 CSRNP1Q96S65 589 aa18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 TCEAL9Q9UHQ7 104 aa18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 PRPF3O43395 683 aaKnown RBP18.01■□□□□ 0.47
SMARCD1-202ENST00000394963 CHMP2AO43633 222 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms