RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 NEK1Q96PY6 1258 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 DSCC1Q9BVC3 393 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 ARMT1Q9H993 441 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 GNL3LQ9NVN8 582 aaKnown RBP6.91□□□□□ -1.3
CASC3-202ENST00000394114 DOCK2Q92608 1830 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 PTPREP23469 700 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 ATP2B2Q01814 1243 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 STK3Q13188 491 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 CCDC83Q8IWF9 413 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 MRFAP1L1Q96HT8 127 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 CHAMP1Q96JM3 812 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 TM6SF1Q9BZW5 370 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 ANKRD2Q9GZV1 360 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 LIMCH1Q9UPQ0 1083 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 ANKRD31Q8N7Z5 1873 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 TCRBV5S4A2TA0A5A2 114 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 M0R2N6 131 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 GPR182O15218 404 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 RPS6KB1P23443 525 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 HIBADHP31937 336 aaKnown RBP6.91□□□□□ -1.3
CASC3-202ENST00000394114 UBE3CQ15386 1083 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 ADGRA1Q86SQ6 560 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 STK11IPQ8N1F8 1099 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 TPCN1Q9ULQ1 816 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 PCDHGB7Q9Y5F8 929 aa6.91□□□□□ -1.3
CASC3-202ENST00000394114 CACNA1SQ13698 1873 aa6.9□□□□□ -1.3
CASC3-202ENST00000394114 E7EWF7 191 aa6.9□□□□□ -1.3
CASC3-202ENST00000394114 PRKAB2O43741 272 aa6.9□□□□□ -1.3
CASC3-202ENST00000394114 CFHP08603 1231 aa6.9□□□□□ -1.3
CASC3-202ENST00000394114 GPSM2P81274 684 aa6.9□□□□□ -1.3
CASC3-202ENST00000394114 RAB3GAP1Q15042 981 aa6.9□□□□□ -1.3
CASC3-202ENST00000394114 ME3Q16798 604 aa6.9□□□□□ -1.3
CASC3-202ENST00000394114 FOXD4L6Q3SYB3 417 aaPredicted RBP6.9□□□□□ -1.3
CASC3-202ENST00000394114 CRY2Q49AN0 593 aa6.9□□□□□ -1.3
CASC3-202ENST00000394114 OXLD1Q5BKU9 147 aa6.9□□□□□ -1.3
CASC3-202ENST00000394114 FOXD4L3Q6VB84 417 aaPredicted RBP6.9□□□□□ -1.3
CASC3-202ENST00000394114 TSEN2Q8NCE0 465 aaKnown RBP6.9□□□□□ -1.3
CASC3-202ENST00000394114 GPKOWQ92917 476 aaPredicted RBP eCLIP6.9□□□□□ -1.3
CASC3-202ENST00000394114 CRELD1Q96HD1 420 aa6.9□□□□□ -1.3
CASC3-202ENST00000394114 SRA1Q9HD15 236 aaKnown RBP6.9□□□□□ -1.3
CASC3-202ENST00000394114 DENND2AQ9ULE3 1009 aa6.9□□□□□ -1.3
CASC3-202ENST00000394114 PSDA5PKW4 1024 aaPredicted RBP6.9□□□□□ -1.31
CASC3-202ENST00000394114 UFL1O94874 794 aa6.9□□□□□ -1.31
CASC3-202ENST00000394114 CYP7A1P22680 504 aa6.9□□□□□ -1.31
CASC3-202ENST00000394114 CUL4AQ13619 759 aa6.9□□□□□ -1.31
CASC3-202ENST00000394114 TOB2Q14106 344 aaPredicted RBP6.9□□□□□ -1.31
CASC3-202ENST00000394114 KRT32Q14532 448 aa6.9□□□□□ -1.31
CASC3-202ENST00000394114 Q6ZUG5 572 aa6.9□□□□□ -1.31
CASC3-202ENST00000394114 LCORLQ8N3X6 602 aa6.9□□□□□ -1.31
CASC3-202ENST00000394114 RBM17Q96I25 401 aaKnown RBP6.9□□□□□ -1.31
CASC3-202ENST00000394114 CAMKK2Q96RR4 588 aa6.9□□□□□ -1.31
CASC3-202ENST00000394114 PARP3Q9Y6F1 533 aa6.9□□□□□ -1.31
CASC3-202ENST00000394114 XDHP47989 1333 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 FZD6O60353 706 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 PPFIA3O75145 1194 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 CTSHP09668 335 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 PRDX5P30044 214 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 GJA8P48165 433 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 SERINC3Q13530 473 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 SLC15A2Q16348 729 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 IMMTQ16891 758 aaKnown RBP6.89□□□□□ -1.31
CASC3-202ENST00000394114 Q3C1V9 767 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 BRF1Q92994 677 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 STRBPQ96SI9 672 aaKnown RBP6.89□□□□□ -1.31
CASC3-202ENST00000394114 INCENPQ9NQS7 918 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 GNA15P30679 374 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 MCM4P33991 863 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 DYNLL1P63167 89 aaKnown RBP6.89□□□□□ -1.31
CASC3-202ENST00000394114 ST3GAL1Q11201 340 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 ENOX2Q16206 610 aaKnown RBP6.89□□□□□ -1.31
CASC3-202ENST00000394114 PROX2Q3B8N5 592 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 PPP4R3BQ5MIZ7 849 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 MORN1Q5T089 497 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 USP48Q86UV5 1035 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 FLAD1Q8NFF5 587 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 ZNF384Q8TF68 577 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 SDR42E1Q8WUS8 393 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 STAG1Q8WVM7 1258 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 STK32BQ9NY57 414 aa6.89□□□□□ -1.31
CASC3-202ENST00000394114 BAZ2AQ9UIF9 1905 aaKnown RBP6.89□□□□□ -1.31
CASC3-202ENST00000394114 ZNF213O14771 459 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 RIMBP2O15034 1052 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 NKX2-3Q8TAU0 364 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 ADAM32Q8TC27 787 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 ZNF622Q969S3 477 aaKnown RBP eCLIP6.88□□□□□ -1.31
CASC3-202ENST00000394114 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.88□□□□□ -1.315e-9■□□□□ 9.8
CASC3-202ENST00000394114 BRIP1Q9BX63 1249 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 EPB41L4AQ9HCS5 686 aaPredicted RBP6.88□□□□□ -1.31
CASC3-202ENST00000394114 CTNNA3Q9UI47 895 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 SLC27A5Q9Y2P5 690 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 ZDHHC9Q9Y397 364 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 SLC4A4Q9Y6R1 1079 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 SMIM22K7EJ46 135 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 PPEF1O14829 653 aaPredicted RBP6.88□□□□□ -1.31
CASC3-202ENST00000394114 DNAJC6O75061 913 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 SRGNP10124 158 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 ATF4P18848 351 aaPredicted RBP6.88□□□□□ -1.31
CASC3-202ENST00000394114 HOXA10P31260 410 aaPredicted RBP6.88□□□□□ -1.31
CASC3-202ENST00000394114 APOBRQ0VD83 1088 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 ALG1LQ6GMV1 187 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms