RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 DDX39AO00148 427 aaKnown RBP11.97□□□□□ -0.49
MTHFD2-201ENST00000394053 NLRP12P59046 1061 aa11.97□□□□□ -0.49
MTHFD2-201ENST00000394053 NR5A1Q13285 461 aa11.97□□□□□ -0.49
MTHFD2-201ENST00000394053 LUC7L2Q9Y383 392 aaKnown RBP11.97□□□□□ -0.49
MTHFD2-201ENST00000394053 FMNL1O95466 1100 aaPredicted RBP11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 CYP2D6P10635 497 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 CACNB3P54284 484 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 SF3B3Q15393 1217 aaKnown RBP11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 USP17L2Q6R6M4 530 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 USP37Q86T82 979 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 CSGALNACT2Q8N6G5 542 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 SH3RF3Q8TEJ3 882 aaPredicted RBP11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 KAZALD1Q96I82 304 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 BRIP1Q9BX63 1249 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 RTEL1Q9NZ71 1219 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 GDF11O95390 407 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 TTLL1O95922 423 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 RFX5P48382 616 aaPredicted RBP11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 NDUFA8P51970 172 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 EN1Q05925 392 aaPredicted RBP11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 TBC1D8BQ0IIM8 1120 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 HS1BP3Q53T59 392 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 CNNM4Q6P4Q7 775 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 NEK8Q86SG6 692 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 PDCL2Q8N4E4 241 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 JADE2Q9NQC1 790 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 GJB4Q9NTQ9 266 aa11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 PUF60Q9UHX1 559 aaKnown RBP11.96□□□□□ -0.49
MTHFD2-201ENST00000394053 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.96□□□□□ -0.494e-8■■■□□ 17.2
MTHFD2-201ENST00000394053 TECP42680 631 aa11.96□□□□□ -0.5
MTHFD2-201ENST00000394053 FANCCQ00597 558 aa11.96□□□□□ -0.5
MTHFD2-201ENST00000394053 SLC39A14Q15043 492 aa11.96□□□□□ -0.5
MTHFD2-201ENST00000394053 GPR162Q16538 588 aa11.96□□□□□ -0.5
MTHFD2-201ENST00000394053 FBXO11Q86XK2 927 aa11.96□□□□□ -0.5
MTHFD2-201ENST00000394053 RASGRP4Q8TDF6 673 aa11.96□□□□□ -0.5
MTHFD2-201ENST00000394053 CCDC42Q96M95 316 aa11.96□□□□□ -0.5
MTHFD2-201ENST00000394053 ALS2CR12Q96Q35 445 aa11.96□□□□□ -0.5
MTHFD2-201ENST00000394053 SWAP70Q9UH65 585 aa11.96□□□□□ -0.5
MTHFD2-201ENST00000394053 KIF23Q02241 960 aaPredicted RBP11.96□□□□□ -0.5
MTHFD2-201ENST00000394053 GPATCH4Q5T3I0 446 aaKnown RBP11.96□□□□□ -0.5
MTHFD2-201ENST00000394053 TRMT44Q8IYL2 757 aaKnown RBP11.96□□□□□ -0.5
MTHFD2-201ENST00000394053 CENPHQ9H3R5 247 aa11.96□□□□□ -0.5
MTHFD2-201ENST00000394053 KANSL2Q9H9L4 492 aa11.96□□□□□ -0.5
MTHFD2-201ENST00000394053 PCDHA12Q9UN75 941 aa11.96□□□□□ -0.5
MTHFD2-201ENST00000394053 REREQ9P2R6 1566 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 UTYO14607 1347 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 CLCN1P35523 988 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 CETN2P41208 172 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 CDK8P49336 464 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 GAS2L3Q86XJ1 694 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 PI4KBQ9UBF8 816 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 DNM3Q9UQ16 869 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 PHACTR2O75167 634 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 ALAS1P13196 640 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 RPL13P26373 211 aaKnown RBP11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 SLC16A2P36021 539 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 FAM193AP78312 1265 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 DCAF15Q66K64 600 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 TMCO3Q6UWJ1 677 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 MAEAQ7L5Y9 396 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 PAF1Q8N7H5 531 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 DHX36Q9H2U1 1008 aaKnown RBP11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 FOXP1Q9H334 677 aaPredicted RBP11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 GSG1L2A8MUP6 293 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 DESP17661 470 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 ERCC3P19447 782 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 PAK1Q13153 545 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 EAPPQ56P03 285 aaPredicted RBP11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 DPY19L2Q6NUT2 758 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 KCTD1Q719H9 257 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 KIF2CQ99661 725 aa11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 DCP1AQ9NPI6 582 aaPredicted RBP11.95□□□□□ -0.5
MTHFD2-201ENST00000394053 CCDC175P0C221 793 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 PPP1R2P41236 205 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 PRR16Q569H4 304 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 GALNT17Q6IS24 598 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 PRR5LQ6MZQ0 368 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 PODNQ7Z5L7 613 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 NEK11Q8NG66 645 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 TBC1D7Q9P0N9 293 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 MACROD2A1Z1Q3 448 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 ARHGEF35A5YM69 484 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 ZBTB7AO95365 584 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 NTSR2O95665 410 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 GPSM2P81274 684 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 DCAF17Q5H9S7 520 aaPredicted RBP11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 STAG1Q8WVM7 1258 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 TTC14Q96N46 770 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 NOC4LQ9BVI4 516 aaKnown RBP11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 CSADQ9Y600 493 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 USP42Q9H9J4 1324 aaKnown RBP11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 SYNRGQ9UMZ2 1314 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 RPAP1Q9BWH6 1393 aaPredicted RBP11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 CCDC172P0C7W6 258 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 CYB5R4Q7L1T6 521 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 IGSF22Q8N9C0 903 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 TBC1D5Q92609 795 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 DRC1Q96MC2 740 aa11.94□□□□□ -0.5
MTHFD2-201ENST00000394053 RCOR1Q9UKL0 485 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms