RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 MAP3K14Q99558 947 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 CABP5Q9NP86 173 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 TCP11L1Q9NUJ3 509 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 RBM28Q9NW13 759 aaKnown RBP17.28■□□□□ 0.36
MKS1-202ENST00000393119 CALM1P0DP23 149 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 CALM2P0DP24 149 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 CALM3P0DP25 149 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 PRELPP51888 382 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 SNW1Q13573 536 aaKnown RBP17.28■□□□□ 0.36
MKS1-202ENST00000393119 CERS3Q8IU89 383 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 NOSTRINQ8IVI9 506 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 SUPT20HQ8NEM7 779 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 ANKS1AQ92625 1134 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 SYAP1Q96A49 352 aaPredicted RBP17.28■□□□□ 0.36
MKS1-202ENST00000393119 PSMD1Q99460 953 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 CLIP2Q9UDT6 1046 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 PCDHB6Q9Y5E3 794 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 SPTLC2O15270 562 aa17.27■□□□□ 0.36
MKS1-202ENST00000393119 POLD1P28340 1107 aa17.27■□□□□ 0.36
MKS1-202ENST00000393119 RRP1BQ14684 758 aaKnown RBP17.27■□□□□ 0.36
MKS1-202ENST00000393119 DALRD3Q5D0E6 543 aaKnown RBP17.27■□□□□ 0.36
MKS1-202ENST00000393119 RSBN1LQ6PCB5 846 aaPredicted RBP17.27■□□□□ 0.36
MKS1-202ENST00000393119 FSIP1Q8NA03 581 aa17.27■□□□□ 0.36
MKS1-202ENST00000393119 UPF1Q92900 1129 aaKnown RBP eCLIP17.27■□□□□ 0.36
MKS1-202ENST00000393119 NFKBIEO00221 500 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 NASPP49321 788 aaPredicted RBP17.26■□□□□ 0.35
MKS1-202ENST00000393119 RASSF7Q02833 373 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 GRM4Q14833 912 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 PTPAQ15257 358 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 RASGRP4Q8TDF6 673 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 WASF1Q92558 559 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 PHF20Q9BVI0 1012 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 POLR3EQ9NVU0 708 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 MTMR4Q9NYA4 1195 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 SERPINA10Q9UK55 444 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 ZNF646O15015 1829 aaPredicted RBP17.26■□□□□ 0.35
MKS1-202ENST00000393119 GDF11O95390 407 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 EGFRP00533 1210 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 NDUFA8P51970 172 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 CXCL9Q07325 125 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 HOMER1Q86YM7 354 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 SGIP1Q9BQI5 828 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 TSPY26PQ9H489 355 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 DLEC1Q9Y238 1755 aa17.26■□□□□ 0.35
MKS1-202ENST00000393119 RAD21O60216 631 aa17.25■□□□□ 0.35
MKS1-202ENST00000393119 NUP62CLQ9H1M0 184 aa17.25■□□□□ 0.35
MKS1-202ENST00000393119 PDCL3Q9H2J4 239 aa17.25■□□□□ 0.35
MKS1-202ENST00000393119 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.25■□□□□ 0.35
MKS1-202ENST00000393119 KLRF2D3W0D1 207 aa17.25■□□□□ 0.35
MKS1-202ENST00000393119 VIL1P09327 827 aaKnown RBP17.25■□□□□ 0.35
MKS1-202ENST00000393119 AXDND1Q5T1B0 1012 aaPredicted RBP17.25■□□□□ 0.35
MKS1-202ENST00000393119 CCDC125Q86Z20 511 aa17.25■□□□□ 0.35
MKS1-202ENST00000393119 GMLQ99445 158 aa17.25■□□□□ 0.35
MKS1-202ENST00000393119 FUCA2Q9BTY2 467 aa17.25■□□□□ 0.35
MKS1-202ENST00000393119 ZNF287Q9HBT7 754 aa17.25■□□□□ 0.35
MKS1-202ENST00000393119 PALM3A6NDB9 673 aaPredicted RBP17.24■□□□□ 0.35
MKS1-202ENST00000393119 SCG2P13521 617 aa17.24■□□□□ 0.35
MKS1-202ENST00000393119 PTGER2P43116 358 aa17.24■□□□□ 0.35
MKS1-202ENST00000393119 TGFB2P61812 414 aa17.24■□□□□ 0.35
MKS1-202ENST00000393119 FKBP1AP62942 108 aaKnown RBP17.24■□□□□ 0.35
MKS1-202ENST00000393119 MYH15Q9Y2K3 1946 aa17.24■□□□□ 0.35
MKS1-202ENST00000393119 TERF1P54274 439 aa17.24■□□□□ 0.35
MKS1-202ENST00000393119 SLC39A14Q15043 492 aa17.24■□□□□ 0.35
MKS1-202ENST00000393119 SAFBQ15424 915 aaKnown RBP eCLIP17.24■□□□□ 0.35
MKS1-202ENST00000393119 PFKFB3Q16875 520 aaPredicted RBP17.24■□□□□ 0.35
MKS1-202ENST00000393119 RBM26Q5T8P6 1007 aaKnown RBP17.24■□□□□ 0.35
MKS1-202ENST00000393119 TTBK2Q6IQ55 1244 aa17.24■□□□□ 0.35
MKS1-202ENST00000393119 ENGASEQ8NFI3 743 aa17.24■□□□□ 0.35
MKS1-202ENST00000393119 IDI2Q9BXS1 227 aa17.24■□□□□ 0.35
MKS1-202ENST00000393119 TNMDQ9H2S6 317 aa17.24■□□□□ 0.35
MKS1-202ENST00000393119 GPCPD1Q9NPB8 672 aa17.24■□□□□ 0.35
MKS1-202ENST00000393119 CCDC173Q0VFZ6 552 aa17.23■□□□□ 0.35
MKS1-202ENST00000393119 PPP2R5BQ15173 497 aa17.23■□□□□ 0.35
MKS1-202ENST00000393119 NIM1KQ8IY84 436 aa17.23■□□□□ 0.35
MKS1-202ENST00000393119 ZNRF3Q9ULT6 936 aa17.23■□□□□ 0.35
MKS1-202ENST00000393119 IGKV6D-41A0A0C4DH26 115 aa17.23■□□□□ 0.35
MKS1-202ENST00000393119 SPDYE2BA6NHP3 402 aa17.23■□□□□ 0.35
MKS1-202ENST00000393119 HLA-DOAP06340 250 aa17.23■□□□□ 0.35
MKS1-202ENST00000393119 SPDYE6P0CI01 402 aa17.23■□□□□ 0.35
MKS1-202ENST00000393119 KIF5BP33176 963 aa17.23■□□□□ 0.35
MKS1-202ENST00000393119 NBPF9Q3BBW0 867 aa17.23■□□□□ 0.35
MKS1-202ENST00000393119 WWC2Q6AWC2 1192 aa17.23■□□□□ 0.35
MKS1-202ENST00000393119 TRIM44Q96DX7 344 aaPredicted RBP17.23■□□□□ 0.35
MKS1-202ENST00000393119 MRIQ9BWK5 157 aa17.23■□□□□ 0.35
MKS1-202ENST00000393119 CLSTN2Q9H4D0 955 aa17.23■□□□□ 0.35
MKS1-202ENST00000393119 VEZTQ9HBM0 779 aa17.23■□□□□ 0.35
MKS1-202ENST00000393119 YEATS4O95619 227 aa17.22■□□□□ 0.35
MKS1-202ENST00000393119 TOP1P11387 765 aaKnown RBP17.22■□□□□ 0.35
MKS1-202ENST00000393119 SLC16A2P36021 539 aa17.22■□□□□ 0.35
MKS1-202ENST00000393119 NLRP5P59047 1200 aa17.22■□□□□ 0.35
MKS1-202ENST00000393119 ADALQ6DHV7 355 aa17.22■□□□□ 0.35
MKS1-202ENST00000393119 SHC4Q6S5L8 630 aa17.22■□□□□ 0.35
MKS1-202ENST00000393119 HEATR3Q7Z4Q2 680 aa17.22■□□□□ 0.35
MKS1-202ENST00000393119 FOXP1Q9H334 677 aaPredicted RBP17.22■□□□□ 0.35
MKS1-202ENST00000393119 FOCADQ5VW36 1801 aa17.22■□□□□ 0.35
MKS1-202ENST00000393119 PDHBP11177 359 aa17.22■□□□□ 0.35
MKS1-202ENST00000393119 KRT2P35908 639 aa17.22■□□□□ 0.35
MKS1-202ENST00000393119 HDLBPQ00341 1268 aaKnown RBP17.22■□□□□ 0.35
MKS1-202ENST00000393119 ATL3Q6DD88 541 aa17.22■□□□□ 0.35
MKS1-202ENST00000393119 KCTD1Q719H9 257 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms