RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 SPICE1Q8N0Z3 855 aa19.97■□□□□ 0.79
PTPRK-208ENST00000392449 TANGO6Q9C0B7 1094 aa19.97■□□□□ 0.79
PTPRK-208ENST00000392449 PCDHB15Q9Y5E8 787 aa19.97■□□□□ 0.79
PTPRK-208ENST00000392449 A0A0G2JMZ2 1700 aa19.96■□□□□ 0.79
PTPRK-208ENST00000392449 CCND3P30281 292 aaPredicted RBP19.96■□□□□ 0.79
PTPRK-208ENST00000392449 RGS2P41220 211 aa19.96■□□□□ 0.79
PTPRK-208ENST00000392449 MNX1P50219 401 aaPredicted RBP19.96■□□□□ 0.79
PTPRK-208ENST00000392449 CTR9Q6PD62 1173 aa19.96■□□□□ 0.79
PTPRK-208ENST00000392449 LBX2Q6XYB7 198 aa19.96■□□□□ 0.79
PTPRK-208ENST00000392449 APBA2Q99767 749 aa19.96■□□□□ 0.79
PTPRK-208ENST00000392449 FLRT1Q9NZU1 646 aa19.96■□□□□ 0.79
PTPRK-208ENST00000392449 SZT2Q5T011 3432 aa19.95■□□□□ 0.78
PTPRK-208ENST00000392449 ICA1Q05084 483 aa19.95■□□□□ 0.78
PTPRK-208ENST00000392449 C16orf86Q6ZW13 317 aa19.95■□□□□ 0.78
PTPRK-208ENST00000392449 STK11IPQ8N1F8 1099 aa19.95■□□□□ 0.78
PTPRK-208ENST00000392449 RBM27Q9P2N5 1060 aaKnown RBP19.95■□□□□ 0.78
PTPRK-208ENST00000392449 EVI5O60447 810 aa19.94■□□□□ 0.78
PTPRK-208ENST00000392449 CCNA1P78396 465 aa19.94■□□□□ 0.78
PTPRK-208ENST00000392449 MAP2K5Q13163 448 aa19.94■□□□□ 0.78
PTPRK-208ENST00000392449 ZSCAN25Q6NSZ9 544 aa19.94■□□□□ 0.78
PTPRK-208ENST00000392449 SAMD1Q6SPF0 538 aaPredicted RBP19.94■□□□□ 0.78
PTPRK-208ENST00000392449 OTUD7AQ8TE49 926 aaPredicted RBP19.94■□□□□ 0.78
PTPRK-208ENST00000392449 OSBP2Q969R2 916 aa19.94■□□□□ 0.78
PTPRK-208ENST00000392449 PCDH10Q9P2E7 1040 aa19.94■□□□□ 0.78
PTPRK-208ENST00000392449 PARP14Q460N5 1801 aa19.94■□□□□ 0.78
PTPRK-208ENST00000392449 PTPREP23469 700 aa19.93■□□□□ 0.78
PTPRK-208ENST00000392449 ATP2B2Q01814 1243 aa19.93■□□□□ 0.78
PTPRK-208ENST00000392449 NECAB2Q7Z6G3 386 aa19.93■□□□□ 0.78
PTPRK-208ENST00000392449 KBTBD3Q8NAB2 608 aa19.93■□□□□ 0.78
PTPRK-208ENST00000392449 STRBPQ96SI9 672 aaKnown RBP19.93■□□□□ 0.78
PTPRK-208ENST00000392449 FRMPD3Q5JV73 1810 aa19.93■□□□□ 0.78
PTPRK-208ENST00000392449 COG2Q14746 738 aa19.92■□□□□ 0.78
PTPRK-208ENST00000392449 AMOTL1Q8IY63 956 aa19.92■□□□□ 0.78
PTPRK-208ENST00000392449 NPLOC4Q8TAT6 608 aa19.92■□□□□ 0.78
PTPRK-208ENST00000392449 DDRGK1Q96HY6 314 aa19.92■□□□□ 0.78
PTPRK-208ENST00000392449 MOV10L1Q9BXT6 1211 aaKnown RBP19.92■□□□□ 0.78
PTPRK-208ENST00000392449 ARHGEF10LQ9HCE6 1279 aa19.92■□□□□ 0.78
PTPRK-208ENST00000392449 OGDHLQ9ULD0 1010 aa19.92■□□□□ 0.78
PTPRK-208ENST00000392449 TMX2Q9Y320 296 aa19.92■□□□□ 0.78
PTPRK-208ENST00000392449 NR2E3Q9Y5X4 410 aa19.92■□□□□ 0.78
PTPRK-208ENST00000392449 GSG1L2A8MUP6 293 aa19.92■□□□□ 0.78
PTPRK-208ENST00000392449 EEF2P13639 858 aaKnown RBP19.92■□□□□ 0.78
PTPRK-208ENST00000392449 GRB14Q14449 540 aa19.92■□□□□ 0.78
PTPRK-208ENST00000392449 ATG4CQ96DT6 458 aa19.92■□□□□ 0.78
PTPRK-208ENST00000392449 VCPKMTQ9H867 229 aa19.92■□□□□ 0.78
PTPRK-208ENST00000392449 COL11A1P12107 1806 aaPredicted RBP19.91■□□□□ 0.78
PTPRK-208ENST00000392449 SLC15A5A6NIM6 579 aa19.91■□□□□ 0.78
PTPRK-208ENST00000392449 M0R2C6 588 aa19.91■□□□□ 0.78
PTPRK-208ENST00000392449 FLOT1O75955 427 aa19.91■□□□□ 0.78
PTPRK-208ENST00000392449 LHX8Q68G74 356 aa19.91■□□□□ 0.78
PTPRK-208ENST00000392449 TRMT44Q8IYL2 757 aaKnown RBP19.91■□□□□ 0.78
PTPRK-208ENST00000392449 C7orf61Q8IZ16 206 aa19.91■□□□□ 0.78
PTPRK-208ENST00000392449 ANKLE1Q8NAG6 615 aa19.91■□□□□ 0.78
PTPRK-208ENST00000392449 GPATCH3Q96I76 525 aa19.91■□□□□ 0.78
PTPRK-208ENST00000392449 CCDC17Q96LX7 622 aa19.91■□□□□ 0.78
PTPRK-208ENST00000392449 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.91■□□□□ 0.78
PTPRK-208ENST00000392449 SPATC1LQ9H0A9 340 aa19.91■□□□□ 0.78
PTPRK-208ENST00000392449 EPB41L4AQ9HCS5 686 aaPredicted RBP19.91■□□□□ 0.78
PTPRK-208ENST00000392449 IVNS1ABPQ9Y6Y0 642 aa19.91■□□□□ 0.78
PTPRK-208ENST00000392449 GREB1LQ9C091 1923 aaPredicted RBP19.9■□□□□ 0.78
PTPRK-208ENST00000392449 RNF113AO15541 343 aaKnown RBP19.9■□□□□ 0.78
PTPRK-208ENST00000392449 GLRX3O76003 335 aaKnown RBP19.9■□□□□ 0.78
PTPRK-208ENST00000392449 PLS1Q14651 629 aa19.9■□□□□ 0.78
PTPRK-208ENST00000392449 APPBP2Q92624 585 aa19.9■□□□□ 0.78
PTPRK-208ENST00000392449 NBPF3Q9H094 633 aa19.9■□□□□ 0.78
PTPRK-208ENST00000392449 PRO3102Q9H379 93 aa19.9■□□□□ 0.78
PTPRK-208ENST00000392449 C11orf49Q9H6J7 331 aa19.9■□□□□ 0.78
PTPRK-208ENST00000392449 FBXO28Q9NVF7 368 aa19.9■□□□□ 0.78
PTPRK-208ENST00000392449 HOXC10Q9NYD6 342 aa19.9■□□□□ 0.78
PTPRK-208ENST00000392449 ARPP21Q9UBL0 812 aaPredicted RBP19.9■□□□□ 0.78
PTPRK-208ENST00000392449 PFASO15067 1338 aa19.9■□□□□ 0.78
PTPRK-208ENST00000392449 MINDY4BA8MYZ0 360 aa19.89■□□□□ 0.77
PTPRK-208ENST00000392449 GPAA1O43292 621 aa19.89■□□□□ 0.77
PTPRK-208ENST00000392449 RAD21O60216 631 aa19.89■□□□□ 0.77
PTPRK-208ENST00000392449 ERCC3P19447 782 aa19.89■□□□□ 0.77
PTPRK-208ENST00000392449 DSG3P32926 999 aa19.89■□□□□ 0.77
PTPRK-208ENST00000392449 CYP2C19P33261 490 aa19.89■□□□□ 0.77
PTPRK-208ENST00000392449 RRP1P56182 461 aaKnown RBP19.89■□□□□ 0.77
PTPRK-208ENST00000392449 LPAR1Q92633 364 aa19.89■□□□□ 0.77
PTPRK-208ENST00000392449 SEC62Q99442 399 aaKnown RBP19.89■□□□□ 0.77
PTPRK-208ENST00000392449 LAMA3Q16787 3333 aa19.89■□□□□ 0.77
PTPRK-208ENST00000392449 CAPN2P17655 700 aa19.88■□□□□ 0.77
PTPRK-208ENST00000392449 ADORA2AP29274 412 aa19.88■□□□□ 0.77
PTPRK-208ENST00000392449 TRPV1Q8NER1 839 aa19.88■□□□□ 0.77
PTPRK-208ENST00000392449 PI4K2BQ8TCG2 481 aa19.88■□□□□ 0.77
PTPRK-208ENST00000392449 ZMYND8Q9ULU4 1186 aaPredicted RBP19.88■□□□□ 0.77
PTPRK-208ENST00000392449 DNAH12Q6ZR08 3092 aa19.88■□□□□ 0.77
PTPRK-208ENST00000392449 ZNF236Q9UL36 1845 aa19.88■□□□□ 0.77
PTPRK-208ENST00000392449 HOXC6P09630 235 aa19.87■□□□□ 0.77
PTPRK-208ENST00000392449 RASA1P20936 1047 aa19.87■□□□□ 0.77
PTPRK-208ENST00000392449 MFSD14CQ5VZR4 134 aa19.87■□□□□ 0.77
PTPRK-208ENST00000392449 CRBNQ96SW2 442 aa19.87■□□□□ 0.77
PTPRK-208ENST00000392449 SH2D4AQ9H788 454 aa19.87■□□□□ 0.77
PTPRK-208ENST00000392449 KANSL2Q9H9L4 492 aa19.87■□□□□ 0.77
PTPRK-208ENST00000392449 STAP2Q9UGK3 403 aa19.87■□□□□ 0.77
PTPRK-208ENST00000392449 WDR46O15213 610 aaKnown RBP19.86■□□□□ 0.77
PTPRK-208ENST00000392449 COBLO75128 1261 aa19.86■□□□□ 0.77
PTPRK-208ENST00000392449 SYN1P17600 705 aa19.86■□□□□ 0.77
PTPRK-208ENST00000392449 TMEM132BQ14DG7 1078 aa19.86■□□□□ 0.77
PTPRK-208ENST00000392449 SBK1Q52WX2 424 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms