RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 CCDC82Q8N4S0 544 aa22.86■■□□□ 1.25
CSNK1D-203ENST00000392334 PHKBQ93100 1093 aa22.86■■□□□ 1.25
CSNK1D-203ENST00000392334 FTOQ9C0B1 505 aaKnown RBP eCLIP22.86■■□□□ 1.253e-10■■■■■ 39.9
CSNK1D-203ENST00000392334 PCP11498 1178 aaKnown RBP22.86■■□□□ 1.25
CSNK1D-203ENST00000392334 NFIAQ12857 509 aa22.86■■□□□ 1.25
CSNK1D-203ENST00000392334 IFIT1BQ5T764 474 aaKnown RBP22.86■■□□□ 1.25
CSNK1D-203ENST00000392334 CIAPIN1Q6FI81 312 aa22.86■■□□□ 1.25
CSNK1D-203ENST00000392334 FSIP1Q8NA03 581 aa22.86■■□□□ 1.25
CSNK1D-203ENST00000392334 GMLQ99445 158 aa22.86■■□□□ 1.25
CSNK1D-203ENST00000392334 FAM217BQ9NTX9 383 aaPredicted RBP22.86■■□□□ 1.25
CSNK1D-203ENST00000392334 LMNB1P20700 586 aa22.85■■□□□ 1.25
CSNK1D-203ENST00000392334 RGS22Q8NE09 1264 aa22.85■■□□□ 1.25
CSNK1D-203ENST00000392334 CDK5RAP2Q96SN8 1893 aa22.85■■□□□ 1.25
CSNK1D-203ENST00000392334 BECN2A8MW95 431 aa22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 FZD9O00144 591 aa22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 NCBP1Q09161 790 aaKnown RBP22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 TPD52L1Q16890 204 aaPredicted RBP22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 ADALQ6DHV7 355 aa22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 CEP57L1Q8IYX8 460 aa22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 ZNF654Q8IZM8 581 aa22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 FMR1NBQ8N0W7 255 aaPredicted RBP22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 GJB4Q9NTQ9 266 aa22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 UBE2Q2LH0YL09 131 aa22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 TCP10Q12799 353 aa22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 OTUD7BQ6GQQ9 843 aa22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 TMTC2Q8N394 836 aa22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 MRPS27Q92552 414 aaKnown RBP22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 ZDHHC15Q96MV8 337 aa22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 NAT10Q9H0A0 1025 aaKnown RBP22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 ORC3Q9UBD5 711 aaPredicted RBP22.84■■□□□ 1.25
CSNK1D-203ENST00000392334 LAMB1P07942 1786 aa22.83■■□□□ 1.25
CSNK1D-203ENST00000392334 SLURP2P0DP57 97 aa22.83■■□□□ 1.25
CSNK1D-203ENST00000392334 CDK8P49336 464 aa22.83■■□□□ 1.25
CSNK1D-203ENST00000392334 GPR162Q16538 588 aa22.83■■□□□ 1.25
CSNK1D-203ENST00000392334 ZFPM1Q8IX07 1006 aa22.83■■□□□ 1.25
CSNK1D-203ENST00000392334 ZNF444Q8N0Y2 327 aaPredicted RBP22.83■■□□□ 1.25
CSNK1D-203ENST00000392334 DICER1Q9UPY3 1922 aaKnown RBP22.83■■□□□ 1.24
CSNK1D-203ENST00000392334 NAV1Q8NEY1 1877 aa22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 SHTN1A0MZ66 631 aa22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 ME1P48163 572 aa22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 DMTNQ08495 405 aa22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 AIFM3Q96NN9 605 aa22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 FEZ1Q99689 392 aa22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 BPIFA3Q9BQP9 254 aa22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 PCDHA7Q9UN72 937 aa22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 ZNF541Q9H0D2 1346 aa22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 TSPY3P0CV98 308 aa22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 TSPY8P0CW00 308 aa22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 ZSCAN20P17040 1043 aaPredicted RBP22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 CCDC112Q8NEF3 446 aa22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 IL17RBQ9NRM6 502 aa22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 GJA3Q9Y6H8 435 aa22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 MYO3BQ8WXR4 1341 aa22.82■■□□□ 1.24
CSNK1D-203ENST00000392334 YEATS4O95619 227 aa22.81■■□□□ 1.24
CSNK1D-203ENST00000392334 NYAP1Q6ZVC0 841 aa22.81■■□□□ 1.24
CSNK1D-203ENST00000392334 MTA3Q9BTC8 594 aa22.81■■□□□ 1.24
CSNK1D-203ENST00000392334 RASA1P20936 1047 aa22.81■■□□□ 1.24
CSNK1D-203ENST00000392334 EIF6P56537 245 aaKnown RBP22.81■■□□□ 1.24
CSNK1D-203ENST00000392334 GSDMDP57764 484 aa22.81■■□□□ 1.24
CSNK1D-203ENST00000392334 NTRK3Q16288 839 aa22.81■■□□□ 1.24
CSNK1D-203ENST00000392334 RTN1Q16799 776 aa22.81■■□□□ 1.24
CSNK1D-203ENST00000392334 CFAP100Q494V2 611 aa22.81■■□□□ 1.24
CSNK1D-203ENST00000392334 CEP135Q66GS9 1140 aa22.81■■□□□ 1.24
CSNK1D-203ENST00000392334 FANCBQ8NB91 859 aa22.81■■□□□ 1.24
CSNK1D-203ENST00000392334 LINC00301Q8NCQ3 95 aa22.81■■□□□ 1.24
CSNK1D-203ENST00000392334 TDRD3Q9H7E2 651 aaKnown RBP22.81■■□□□ 1.24
CSNK1D-203ENST00000392334 POLR3EQ9NVU0 708 aa22.81■■□□□ 1.24
CSNK1D-203ENST00000392334 SERPINA10Q9UK55 444 aa22.81■■□□□ 1.24
CSNK1D-203ENST00000392334 ROBO3Q96MS0 1386 aa22.8■■□□□ 1.24
CSNK1D-203ENST00000392334 CCZ1BP86790 482 aa22.8■■□□□ 1.24
CSNK1D-203ENST00000392334 CCZ1P86791 482 aaPredicted RBP22.8■■□□□ 1.24
CSNK1D-203ENST00000392334 TNIP1Q15025 636 aa22.8■■□□□ 1.24
CSNK1D-203ENST00000392334 C16orf86Q6ZW13 317 aa22.8■■□□□ 1.24
CSNK1D-203ENST00000392334 AGBL3Q8NEM8 1001 aa22.8■■□□□ 1.24
CSNK1D-203ENST00000392334 KCNG4Q8TDN1 519 aa22.8■■□□□ 1.24
CSNK1D-203ENST00000392334 PRMT6Q96LA8 375 aaPredicted RBP22.8■■□□□ 1.24
CSNK1D-203ENST00000392334 MRIQ9BWK5 157 aa22.8■■□□□ 1.24
CSNK1D-203ENST00000392334 RNF181Q9P0P0 153 aa22.8■■□□□ 1.24
CSNK1D-203ENST00000392334 IMPACTQ9P2X3 320 aa22.8■■□□□ 1.24
CSNK1D-203ENST00000392334 HDLBPQ00341 1268 aaKnown RBP22.79■■□□□ 1.24
CSNK1D-203ENST00000392334 CATIPQ7Z7H3 387 aa22.79■■□□□ 1.24
CSNK1D-203ENST00000392334 OGFOD1Q8N543 542 aa22.79■■□□□ 1.24
CSNK1D-203ENST00000392334 SLC26A6Q9BXS9 759 aa22.79■■□□□ 1.24
CSNK1D-203ENST00000392334 OSBPL5Q9H0X9 879 aaPredicted RBP22.79■■□□□ 1.24
CSNK1D-203ENST00000392334 SKILP12757 684 aa22.79■■□□□ 1.24
CSNK1D-203ENST00000392334 CBX1P83916 185 aa22.79■■□□□ 1.24
CSNK1D-203ENST00000392334 RCSD1Q6JBY9 416 aa22.79■■□□□ 1.24
CSNK1D-203ENST00000392334 CPLX2Q6PUV4 134 aaKnown RBP22.79■■□□□ 1.24
CSNK1D-203ENST00000392334 BRAPQ7Z569 592 aa22.79■■□□□ 1.24
CSNK1D-203ENST00000392334 GTPBP4Q9BZE4 634 aaKnown RBP22.79■■□□□ 1.24
CSNK1D-203ENST00000392334 MTMR7Q9Y216 660 aa22.79■■□□□ 1.24
CSNK1D-203ENST00000392334 AOPEPQ8N6M6 819 aa22.78■■□□□ 1.24
CSNK1D-203ENST00000392334 CGNQ9P2M7 1197 aaKnown RBP22.78■■□□□ 1.24
CSNK1D-203ENST00000392334 CDKL5O76039 1030 aa22.77■■□□□ 1.24
CSNK1D-203ENST00000392334 DHX8Q14562 1220 aaKnown RBP22.77■■□□□ 1.24
CSNK1D-203ENST00000392334 C8orf76Q96K31 380 aa22.77■■□□□ 1.24
CSNK1D-203ENST00000392334 STX8Q9UNK0 236 aa22.77■■□□□ 1.24
CSNK1D-203ENST00000392334 ECM29Q5VYK3 1845 aa22.77■■□□□ 1.24
CSNK1D-203ENST00000392334 GMPSP49915 693 aaPredicted RBP22.77■■□□□ 1.24
CSNK1D-203ENST00000392334 TROAPQ12815 778 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms