RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 ICE2Q659A1 982 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 SULT6B1Q6IMI4 303 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 BRINP3Q76B58 766 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 TREML1Q86YW5 311 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 TRIM42Q8IWZ5 723 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 MYRIPQ8NFW9 859 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 DDX17Q92841 729 aaKnown RBP3.13□□□□□ -1.91
TRAV41-201ENST00000390468 LTV1Q96GA3 475 aaPredicted RBP3.13□□□□□ -1.91
TRAV41-201ENST00000390468 GBP4Q96PP9 640 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 UBL7Q96S82 380 aaPredicted RBP3.13□□□□□ -1.91
TRAV41-201ENST00000390468 PLEKHF1Q96S99 279 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 PPP1R9BQ96SB3 815 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 PANK2Q9BZ23 570 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 KCNF1Q9H3M0 494 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 DEF6Q9H4E7 631 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 SUDS3Q9H7L9 328 aaPredicted RBP3.13□□□□□ -1.91
TRAV41-201ENST00000390468 QTRT2Q9H974 415 aaKnown RBP3.13□□□□□ -1.91
TRAV41-201ENST00000390468 DIAPH3Q9NSV4 1193 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 DONSONQ9NYP3 566 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 OGFRQ9NZT2 677 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 CWC15Q9P013 229 aaKnown RBP3.13□□□□□ -1.91
TRAV41-201ENST00000390468 CCDC39Q9UFE4 941 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 SH3BP1Q9Y3L3 701 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 PPME1Q9Y570 386 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 SPEF2Q9C093 1822 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 SPATA31A3Q5VYP0 1347 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 RNF123Q5XPI4 1314 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 IGSF1Q8N6C5 1336 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 ZNF521Q96K83 1311 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 NUP188Q5SRE5 1749 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 MYH7P12883 1935 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 MYH13Q9UKX3 1938 aa3.13□□□□□ -1.91
TRAV41-201ENST00000390468 KDRP35968 1356 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 IBTKQ9P2D0 1353 aaPredicted RBP3.12□□□□□ -1.91
TRAV41-201ENST00000390468 BTAF1O14981 1849 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 LOC102724159A0A0B4J2E5 919 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 USP17L15C9J2P7 530 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 USP17L10C9JJH3 530 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 USP17L13C9JLJ4 530 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 USP17L12C9JPN9 530 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 USP17L11C9JVI0 530 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 USP17L21D6R901 530 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 USP17L18D6R9N7 530 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 USP17L22D6RA61 530 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 USP17L17D6RBQ6 530 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 USP17L19D6RCP7 530 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 USP17L20D6RJB6 530 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 H0YHG0 523 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 TULP2O00295 520 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 SART1O43290 800 aaKnown RBP3.12□□□□□ -1.91
TRAV41-201ENST00000390468 ATG7O95352 703 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 GCP02774 474 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 SETSIPP0DME0 302 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 SARNPP82979 210 aaKnown RBP3.12□□□□□ -1.91
TRAV41-201ENST00000390468 ATP11AP98196 1134 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 SLFN5Q08AF3 891 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 KIAA2012Q0VF49 1180 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 USP17L24Q0WX57 530 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 NFIAQ12857 509 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 PWP2Q15269 919 aaKnown RBP3.12□□□□□ -1.91
TRAV41-201ENST00000390468 NFE2L2Q16236 605 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 C11orf91Q3C1V1 193 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 DUSP27Q5VZP5 1158 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 CEP135Q66GS9 1140 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.12□□□□□ -1.91
TRAV41-201ENST00000390468 WDR63Q8IWG1 891 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 TMEM130Q8N3G9 435 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.12□□□□□ -1.91
TRAV41-201ENST00000390468 GALNT11Q8NCW6 608 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 IP6K1Q92551 441 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 TTC9Q92623 222 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 FMNL2Q96PY5 1086 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 TACO1Q9BSH4 297 aaKnown RBP3.12□□□□□ -1.91
TRAV41-201ENST00000390468 C7orf69Q9H7B7 122 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 VRTNQ9H8Y1 702 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 CWC22Q9HCG8 908 aaKnown RBP3.12□□□□□ -1.91
TRAV41-201ENST00000390468 SLAIN2Q9P270 581 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 RCAN3Q9UKA8 241 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 NOL7Q9UMY1 257 aaKnown RBP3.12□□□□□ -1.91
TRAV41-201ENST00000390468 MAFBQ9Y5Q3 323 aaPredicted RBP3.12□□□□□ -1.91
TRAV41-201ENST00000390468 CPDO75976 1380 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 KIAA0232Q92628 1395 aa3.12□□□□□ -1.91
TRAV41-201ENST00000390468 CACNA1SQ13698 1873 aa3.11□□□□□ -1.91
TRAV41-201ENST00000390468 NCAPD2Q15021 1401 aa3.11□□□□□ -1.91
TRAV41-201ENST00000390468 COL5A2P05997 1499 aaPredicted RBP3.11□□□□□ -1.91
TRAV41-201ENST00000390468 COL5A3P25940 1745 aaPredicted RBP3.11□□□□□ -1.91
TRAV41-201ENST00000390468 CCDC196A0A1B0GTZ2 297 aa3.11□□□□□ -1.91
TRAV41-201ENST00000390468 KIAA1324LA8MWY0 1029 aaPredicted RBP3.11□□□□□ -1.91
TRAV41-201ENST00000390468 OPLAHO14841 1288 aa3.11□□□□□ -1.91
TRAV41-201ENST00000390468 PPP1R12AO14974 1030 aaPredicted RBP3.11□□□□□ -1.91
TRAV41-201ENST00000390468 CTAGE5O15320 804 aa3.11□□□□□ -1.91
TRAV41-201ENST00000390468 DDX3YO15523 660 aaKnown RBP3.11□□□□□ -1.91
TRAV41-201ENST00000390468 TOM1O60784 492 aa3.11□□□□□ -1.91
TRAV41-201ENST00000390468 MCM4P33991 863 aa3.11□□□□□ -1.91
TRAV41-201ENST00000390468 CD68P34810 354 aaPredicted RBP3.11□□□□□ -1.91
TRAV41-201ENST00000390468 GTF2F1P35269 517 aaKnown RBP eCLIP3.11□□□□□ -1.91
TRAV41-201ENST00000390468 RRP1P56182 461 aaKnown RBP3.11□□□□□ -1.91
TRAV41-201ENST00000390468 ZC3H6P61129 1189 aaKnown RBP3.11□□□□□ -1.91
TRAV41-201ENST00000390468 FZD5Q13467 585 aa3.11□□□□□ -1.91
TRAV41-201ENST00000390468 ZRSR2Q15696 482 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms