RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 XPNPEP3Q9NQH7 507 aa11.82□□□□□ -0.52
IFT88-203ENST00000389373 NOB1Q9ULX3 412 aaKnown RBP11.82□□□□□ -0.52
IFT88-203ENST00000389373 GRXCR1A8MXD5 290 aa11.81□□□□□ -0.52
IFT88-203ENST00000389373 ANP32CO43423 234 aa11.81□□□□□ -0.52
IFT88-203ENST00000389373 RARBP10826 455 aa11.81□□□□□ -0.52
IFT88-203ENST00000389373 PBX2P40425 430 aa11.81□□□□□ -0.52
IFT88-203ENST00000389373 MRPS5P82675 430 aaKnown RBP11.81□□□□□ -0.52
IFT88-203ENST00000389373 COG2Q14746 738 aa11.81□□□□□ -0.52
IFT88-203ENST00000389373 ALDH1L2Q3SY69 923 aa11.81□□□□□ -0.52
IFT88-203ENST00000389373 C1orf53Q5VUE5 145 aa11.81□□□□□ -0.52
IFT88-203ENST00000389373 LBX2Q6XYB7 198 aa11.81□□□□□ -0.52
IFT88-203ENST00000389373 RNF180Q86T96 592 aa11.81□□□□□ -0.52
IFT88-203ENST00000389373 TANGO6Q9C0B7 1094 aa11.81□□□□□ -0.52
IFT88-203ENST00000389373 SPATC1LQ9H0A9 340 aa11.81□□□□□ -0.52
IFT88-203ENST00000389373 HOXC10Q9NYD6 342 aa11.81□□□□□ -0.52
IFT88-203ENST00000389373 PHF24Q9UPV7 400 aa11.81□□□□□ -0.52
IFT88-203ENST00000389373 SIPA1L1O43166 1804 aa11.81□□□□□ -0.52
IFT88-203ENST00000389373 RLFQ13129 1914 aa11.8□□□□□ -0.52
IFT88-203ENST00000389373 VCANP13611 3396 aa11.8□□□□□ -0.52
IFT88-203ENST00000389373 DCDC2CA8MYV0 355 aa11.8□□□□□ -0.52
IFT88-203ENST00000389373 MPHOSPH10O00566 681 aaKnown RBP11.8□□□□□ -0.52
IFT88-203ENST00000389373 KIAA0355O15063 1070 aa11.8□□□□□ -0.52
IFT88-203ENST00000389373 IGHA2P01877 340 aa11.8□□□□□ -0.52
IFT88-203ENST00000389373 CYP7A1P22680 504 aa11.8□□□□□ -0.52
IFT88-203ENST00000389373 CCDC158Q5M9N0 1113 aa11.8□□□□□ -0.52
IFT88-203ENST00000389373 TATDN1Q6P1N9 297 aa11.8□□□□□ -0.52
IFT88-203ENST00000389373 MIGA1Q8NAN2 632 aa11.8□□□□□ -0.52
IFT88-203ENST00000389373 SLC44A5Q8NCS7 719 aa11.8□□□□□ -0.52
IFT88-203ENST00000389373 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.8□□□□□ -0.52
IFT88-203ENST00000389373 SERPINB13Q9UIV8 391 aa11.8□□□□□ -0.52
IFT88-203ENST00000389373 DNAH12Q6ZR08 3092 aa11.8□□□□□ -0.52
IFT88-203ENST00000389373 LAMA2P24043 3122 aaKnown RBP11.8□□□□□ -0.52
IFT88-203ENST00000389373 PRUNE2Q8WUY3 3088 aa11.79□□□□□ -0.52
IFT88-203ENST00000389373 A0A1W2PQ45 241 aaPredicted RBP11.79□□□□□ -0.52
IFT88-203ENST00000389373 A0A1W2PQY0 241 aa11.79□□□□□ -0.52
IFT88-203ENST00000389373 E9PSI1 815 aa11.79□□□□□ -0.52
IFT88-203ENST00000389373 CYP2E1P05181 493 aaPredicted RBP11.79□□□□□ -0.52
IFT88-203ENST00000389373 ZAP70P43403 619 aa11.79□□□□□ -0.52
IFT88-203ENST00000389373 FAAP100Q0VG06 881 aa11.79□□□□□ -0.52
IFT88-203ENST00000389373 MAML3Q96JK9 1138 aa11.79□□□□□ -0.52
IFT88-203ENST00000389373 API5Q9BZZ5 524 aaKnown RBP11.79□□□□□ -0.52
IFT88-203ENST00000389373 APBB1O00213 710 aa11.78□□□□□ -0.52
IFT88-203ENST00000389373 GNAI3P08754 354 aa11.78□□□□□ -0.52
IFT88-203ENST00000389373 FCER1AP12319 257 aa11.78□□□□□ -0.52
IFT88-203ENST00000389373 SEPT2Q15019 361 aa11.78□□□□□ -0.52
IFT88-203ENST00000389373 AKNAD1Q5T1N1 836 aa11.78□□□□□ -0.52
IFT88-203ENST00000389373 TTC6Q86TZ1 520 aa11.78□□□□□ -0.52
IFT88-203ENST00000389373 MICALL1Q8N3F8 863 aa11.78□□□□□ -0.52
IFT88-203ENST00000389373 SHCBP1Q8NEM2 672 aa11.78□□□□□ -0.52
IFT88-203ENST00000389373 VTI1AQ96AJ9 217 aa11.78□□□□□ -0.52
IFT88-203ENST00000389373 LENG1Q96BZ8 264 aaPredicted RBP11.78□□□□□ -0.52
IFT88-203ENST00000389373 NECAB3Q96P71 396 aaPredicted RBP11.78□□□□□ -0.52
IFT88-203ENST00000389373 DBNDD2Q9BQY9 259 aa11.78□□□□□ -0.52
IFT88-203ENST00000389373 PBX4Q9BYU1 374 aa11.78□□□□□ -0.52
IFT88-203ENST00000389373 PIH1D3Q9NQM4 214 aaKnown RBP11.78□□□□□ -0.52
IFT88-203ENST00000389373 STARD7Q9NQZ5 370 aa11.78□□□□□ -0.52
IFT88-203ENST00000389373 IDH1O75874 414 aaKnown RBP11.77□□□□□ -0.53
IFT88-203ENST00000389373 TIMP1P01033 207 aa11.77□□□□□ -0.53
IFT88-203ENST00000389373 POLR3DP05423 398 aaPredicted RBP11.77□□□□□ -0.53
IFT88-203ENST00000389373 ACRP10323 421 aa11.77□□□□□ -0.53
IFT88-203ENST00000389373 TAL1P17542 331 aaPredicted RBP11.77□□□□□ -0.53
IFT88-203ENST00000389373 GUCY1A2P33402 732 aa11.77□□□□□ -0.53
IFT88-203ENST00000389373 PPIGQ13427 754 aaKnown RBP eCLIP11.77□□□□□ -0.532e-6■■■□□ 15.3
IFT88-203ENST00000389373 OS9Q13438 667 aaPredicted RBP11.77□□□□□ -0.53
IFT88-203ENST00000389373 ADGRE1Q14246 886 aa11.77□□□□□ -0.53
IFT88-203ENST00000389373 CDCA7LQ96GN5 454 aa11.77□□□□□ -0.53
IFT88-203ENST00000389373 MMP19Q99542 508 aa11.77□□□□□ -0.53
IFT88-203ENST00000389373 MROH8Q9H579 483 aa11.77□□□□□ -0.53
IFT88-203ENST00000389373 MSRAQ9UJ68 235 aa11.77□□□□□ -0.53
IFT88-203ENST00000389373 ZNF521Q96K83 1311 aa11.77□□□□□ -0.53
IFT88-203ENST00000389373 SPTBN5Q9NRC6 3674 aaKnown RBP11.76□□□□□ -0.53
IFT88-203ENST00000389373 A0A1W2PRG0 241 aa11.76□□□□□ -0.53
IFT88-203ENST00000389373 FLOT1O75955 427 aa11.76□□□□□ -0.53
IFT88-203ENST00000389373 PGK2P07205 417 aa11.76□□□□□ -0.53
IFT88-203ENST00000389373 DSG3P32926 999 aa11.76□□□□□ -0.53
IFT88-203ENST00000389373 PLCD1P51178 756 aa11.76□□□□□ -0.53
IFT88-203ENST00000389373 SLFN5Q08AF3 891 aa11.76□□□□□ -0.53
IFT88-203ENST00000389373 TMEM240Q5SV17 173 aa11.76□□□□□ -0.53
IFT88-203ENST00000389373 MFSD5Q6N075 450 aa11.76□□□□□ -0.53
IFT88-203ENST00000389373 CCDC174Q6PII3 467 aa11.76□□□□□ -0.53
IFT88-203ENST00000389373 NUP133Q8WUM0 1156 aa11.76□□□□□ -0.53
IFT88-203ENST00000389373 ATG4CQ96DT6 458 aa11.76□□□□□ -0.53
IFT88-203ENST00000389373 PPP1R12CQ9BZL4 782 aa11.76□□□□□ -0.53
IFT88-203ENST00000389373 TSPYL2Q9H2G4 693 aaPredicted RBP11.76□□□□□ -0.53
IFT88-203ENST00000389373 NKX2-4Q9H2Z4 354 aa11.76□□□□□ -0.53
IFT88-203ENST00000389373 PNMA6EA0A0J9YXQ4 647 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 AKR1A1P14550 325 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 CSF2RAP15509 400 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 HOXD11P31277 338 aaPredicted RBP11.75□□□□□ -0.53
IFT88-203ENST00000389373 SHMT1P34896 483 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 ACLYP53396 1101 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 SKIV2LQ15477 1246 aaKnown RBP11.75□□□□□ -0.53
IFT88-203ENST00000389373 KCNA10Q16322 511 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 TNNI3KQ59H18 835 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 ZNF365Q70YC5 407 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 C16orf59Q7L2K0 433 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 ABRAQ8N0Z2 381 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 SPICE1Q8N0Z3 855 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 MAGEB6Q8N7X4 407 aa11.75□□□□□ -0.53
IFT88-203ENST00000389373 MB21D1Q8N884 522 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms