RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 MLKLQ8NB16 471 aa5.56□□□□□ -1.52
LTN1-202ENST00000389194 TACO1Q9BSH4 297 aaKnown RBP5.56□□□□□ -1.52
LTN1-202ENST00000389194 LSM14BQ9BX40 385 aaKnown RBP5.56□□□□□ -1.52
LTN1-202ENST00000389194 NYXQ9GZU5 481 aa5.56□□□□□ -1.52
LTN1-202ENST00000389194 GGA1Q9UJY5 639 aa5.56□□□□□ -1.52
LTN1-202ENST00000389194 TTF2Q9UNY4 1162 aaKnown RBP5.56□□□□□ -1.52
LTN1-202ENST00000389194 FRMD4BQ9Y2L6 1034 aa5.56□□□□□ -1.52
LTN1-202ENST00000389194 MEIS1O00470 390 aa5.56□□□□□ -1.52
LTN1-202ENST00000389194 DIXDC1Q155Q3 683 aa5.56□□□□□ -1.52
LTN1-202ENST00000389194 BSPRYQ5W0U4 402 aa5.56□□□□□ -1.52
LTN1-202ENST00000389194 KCTD1Q719H9 257 aa5.56□□□□□ -1.52
LTN1-202ENST00000389194 ANKRD42Q8N9B4 389 aa5.56□□□□□ -1.52
LTN1-202ENST00000389194 PNMA1Q8ND90 353 aa5.56□□□□□ -1.52
LTN1-202ENST00000389194 ZSCAN10Q96SZ4 725 aaPredicted RBP5.56□□□□□ -1.52
LTN1-202ENST00000389194 DSCC1Q9BVC3 393 aa5.56□□□□□ -1.52
LTN1-202ENST00000389194 PDE11AQ9HCR9 933 aa5.56□□□□□ -1.52
LTN1-202ENST00000389194 NPC1L1Q9UHC9 1359 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 GOLGA6BA6NDN3 693 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 PNMA8AQ86V59 439 aaPredicted RBP5.55□□□□□ -1.52
LTN1-202ENST00000389194 LCORLQ8N3X6 602 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 FBXO18Q8NFZ0 1043 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 PPP1R13BQ96KQ4 1090 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 CTTNBP2NLQ9P2B4 639 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 PARP3Q9Y6F1 533 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 ATP10AO60312 1499 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 CARMIL3Q8ND23 1372 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 TCP10L2B9ZVM9 353 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 EPB41P11171 864 aaKnown RBP5.55□□□□□ -1.52
LTN1-202ENST00000389194 MRPL12P52815 198 aaKnown RBP5.55□□□□□ -1.52
LTN1-202ENST00000389194 RPS8P62241 208 aaKnown RBP5.55□□□□□ -1.52
LTN1-202ENST00000389194 NONOQ15233 471 aaKnown RBP eCLIP5.55□□□□□ -1.52
LTN1-202ENST00000389194 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.55□□□□□ -1.52
LTN1-202ENST00000389194 PI4K2BQ8TCG2 481 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 U2AF1L4Q8WU68 220 aaKnown RBP5.55□□□□□ -1.52
LTN1-202ENST00000389194 GJA10Q969M2 543 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 TTLL3Q9Y4R7 772 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 PCDHB6Q9Y5E3 794 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 KDRP35968 1356 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 KLRF2D3W0D1 207 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 KCNK3O14649 394 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 SLC7A5Q01650 507 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 CYP27A1Q02318 531 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 REXO1Q8N1G1 1221 aaKnown RBP5.55□□□□□ -1.52
LTN1-202ENST00000389194 SLC35F6Q8N357 371 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 CCDC127Q96BQ5 260 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 LRRC27Q9C0I9 530 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 ZSWIM5Q9P217 1185 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 PBRM1Q86U86 1689 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 SOS2Q07890 1332 aaPredicted RBP5.55□□□□□ -1.52
LTN1-202ENST00000389194 NMT2O60551 498 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 EXOC3O60645 756 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 USP17L8P0C7I0 530 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 PLCD1P51178 756 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 POLR2FP61218 127 aaKnown RBP5.55□□□□□ -1.52
LTN1-202ENST00000389194 USPL1Q5W0Q7 1092 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 CNNM4Q6P4Q7 775 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 USP40Q9NVE5 1235 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 RGS12O14924 1447 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 USP17L3A6NCW0 530 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 USP17L4A6NCW7 530 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 USP27XA6NNY8 438 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 TMEM232C9JQI7 657 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 E7EVH7 732 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 RBL2Q08999 1139 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 HLFQ16534 295 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 USP17L1Q7RTZ2 530 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 CEP63Q96MT8 703 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 TM6SF1Q9BZW5 370 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 RTEL1Q9NZ71 1219 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 ASIC3Q9UHC3 531 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 ROBO2Q9HCK4 1378 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 IVLP07476 585 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 KRT19P08727 400 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 ADCY7P51828 1080 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 CACNB3P54284 484 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 RASSF7Q02833 373 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 PTPN12Q05209 780 aaKnown RBP5.55□□□□□ -1.52
LTN1-202ENST00000389194 APOA5Q6Q788 366 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 USP17L2Q6R6M4 530 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 COA7Q96BR5 231 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 SPTLC3Q9NUV7 552 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 SLAIN2Q9P270 581 aa5.55□□□□□ -1.52
LTN1-202ENST00000389194 KIAA0232Q92628 1395 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.54□□□□□ -1.52
LTN1-202ENST00000389194 CLRN2A0PK11 232 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 FRMD3A2A2Y4 597 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 CETN3O15182 167 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 NAA25Q14CX7 972 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 GPBP1Q86WP2 473 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 FNBP1Q96RU3 617 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 IMPG2Q9BZV3 1241 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 ANKRD2Q9GZV1 360 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 RASAL2Q9UJF2 1139 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 AGTPBP1Q9UPW5 1226 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 STK38LQ9Y2H1 464 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 ZDHHC9Q9Y397 364 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 AOX1Q06278 1338 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 UBN2Q6ZU65 1347 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 ARHGEF35A5YM69 484 aa5.54□□□□□ -1.52
LTN1-202ENST00000389194 ZNF500O60304 480 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms