RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 CHRNEQ04844 493 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 DUSP4Q13115 394 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 SEPT6Q14141 434 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 PUM1Q14671 1186 aaKnown RBP eCLIP1.22□□□□□ -2.21
SNORD28-201ENST00000384706 NR0B2Q15466 257 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 SLC14A2Q15849 920 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 ENOX2Q16206 610 aaKnown RBP1.22□□□□□ -2.21
SNORD28-201ENST00000384706 MAP3K11Q16584 847 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 CLEC16AQ2KHT3 1053 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 GAB4Q2WGN9 574 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 SLC6A19Q695T7 634 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 SCARA3Q6AZY7 606 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 TTBK2Q6IQ55 1244 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 CNKSR3Q6P9H4 555 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 MCATQ8IVS2 390 aaKnown RBP1.22□□□□□ -2.21
SNORD28-201ENST00000384706 DTWD2Q8NBA8 298 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 JARID2Q92833 1246 aaPredicted RBP1.22□□□□□ -2.21
SNORD28-201ENST00000384706 DACT3Q96B18 629 aaPredicted RBP1.22□□□□□ -2.21
SNORD28-201ENST00000384706 BORCS6Q96GS4 357 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 TMEM87BQ96K49 555 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 PWWP2AQ96N64 755 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 SETDB2Q96T68 719 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 GPR20Q99678 358 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 SRCIN1Q9C0H9 1055 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 EBF1Q9UH73 591 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 MBD1Q9UIS9 605 aaPredicted RBP1.22□□□□□ -2.21
SNORD28-201ENST00000384706 ZMYM5Q9UJ78 669 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 KCNH3Q9ULD8 1083 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 WWC3Q9ULE0 1092 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 PPM1HQ9ULR3 514 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 CEP131Q9UPN4 1083 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 PCDHB5Q9Y5E4 795 aa1.22□□□□□ -2.21
SNORD28-201ENST00000384706 SSU72P8A0A1W2PR75 194 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 SLC22A31A6NKX4 558 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 NOTOA8MTQ0 251 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 TREHO43280 583 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 PRICKLE3O43900 615 aaPredicted RBP1.21□□□□□ -2.22
SNORD28-201ENST00000384706 USP2O75604 605 aaPredicted RBP1.21□□□□□ -2.22
SNORD28-201ENST00000384706 USP17L7P0C7H9 530 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 PLCG1P19174 1290 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 VIPR1P32241 457 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 NCKAP1LP55160 1127 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 CHMP4BP1P59074 171 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 TEKQ02763 1124 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 PDE4BQ07343 736 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 DSC3Q14574 896 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 CCDC85BQ15834 202 aaPredicted RBP1.21□□□□□ -2.22
SNORD28-201ENST00000384706 SPATS1Q496A3 300 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 ALG1LQ6GMV1 187 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 CEP128Q6ZU80 1094 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 SV2BQ7L1I2 683 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 WAPLQ7Z5K2 1190 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 TXNDC2Q86VQ3 553 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 MRPL41Q8IXM3 137 aaKnown RBP1.21□□□□□ -2.22
SNORD28-201ENST00000384706 SP8Q8IXZ3 490 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 TMEFF1Q8IYR6 380 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 USHBP1Q8N6Y0 703 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 ANKS4BQ8N8V4 417 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 FAM13CQ8NE31 585 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 DNAJB8Q8NHS0 232 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 LINC01599Q8WXQ3 324 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 GAL3ST3Q96A11 431 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 ACSF2Q96CM8 615 aaPredicted RBP1.21□□□□□ -2.22
SNORD28-201ENST00000384706 SHISA4Q96DD7 197 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 TEPSINQ96N21 525 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 BDH2Q9BUT1 245 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 GPR62Q9BZJ7 368 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 ASCC2Q9H1I8 757 aaPredicted RBP1.21□□□□□ -2.22
SNORD28-201ENST00000384706 CNTD2Q9H8S5 307 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 EPB41L4AQ9HCS5 686 aaPredicted RBP1.21□□□□□ -2.22
SNORD28-201ENST00000384706 DCTN4Q9UJW0 460 aa1.21□□□□□ -2.22
SNORD28-201ENST00000384706 TTF2Q9UNY4 1162 aaKnown RBP1.21□□□□□ -2.22
SNORD28-201ENST00000384706 SHISA3A0PJX4 238 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 ZC3H12DA2A288 527 aaKnown RBP1.2□□□□□ -2.22
SNORD28-201ENST00000384706 SOWAHDA6NJG2 315 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 CHURC1-FNTBB4DL54 471 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 OVOL3O00110 214 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 GIPC1O14908 333 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 SUV39H1O43463 412 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 BUB1BO60566 1050 aaPredicted RBP1.2□□□□□ -2.22
SNORD28-201ENST00000384706 EFEMP2O95967 443 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 FSHBP01225 129 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 MPOP05164 745 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 GBP1P32455 592 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 KCNC1P48547 511 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 CDR1P51861 262 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 YARSP54577 528 aaKnown RBP1.2□□□□□ -2.22
SNORD28-201ENST00000384706 RTP1P59025 263 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 ATP2B2Q01814 1243 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 KIR3DS1Q14943 382 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 RTP5Q14D33 572 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 RAB3GAP1Q15042 981 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 TSNAXIP1Q2TAA8 658 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 UBXN11Q5T124 520 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 KRTAP5-11Q6L8G4 156 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 HHIPL2Q6UWX4 724 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 ZPBP2Q6X784 338 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 TMC6Q7Z403 805 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 FRMD5Q7Z6J6 570 aa1.2□□□□□ -2.22
SNORD28-201ENST00000384706 NLRX1Q86UT6 975 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms