RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 NFE2L3Q9Y4A8 694 aa15.83■□□□□ 0.12
NEK4-202ENST00000383721 FANCGO15287 622 aa15.82■□□□□ 0.12
NEK4-202ENST00000383721 ERCC6LQ2NKX8 1250 aa15.82■□□□□ 0.12
NEK4-202ENST00000383721 ENOX1Q8TC92 643 aaKnown RBP15.82■□□□□ 0.12
NEK4-202ENST00000383721 SMARCE1Q969G3 411 aa15.82■□□□□ 0.12
NEK4-202ENST00000383721 ZNF622Q969S3 477 aaKnown RBP eCLIP15.82■□□□□ 0.12
NEK4-202ENST00000383721 CSRNP2Q9H175 543 aa15.82■□□□□ 0.12
NEK4-202ENST00000383721 DNAI1Q9UI46 699 aa15.82■□□□□ 0.12
NEK4-202ENST00000383721 ANAPC4Q9UJX5 808 aa15.82■□□□□ 0.12
NEK4-202ENST00000383721 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.82■□□□□ 0.12
NEK4-202ENST00000383721 CHD4Q14839 1912 aa15.82■□□□□ 0.12
NEK4-202ENST00000383721 FAM205CA6NFA0 338 aa15.82■□□□□ 0.12
NEK4-202ENST00000383721 H0YIN7 160 aa15.82■□□□□ 0.12
NEK4-202ENST00000383721 KCNA3P22001 575 aa15.82■□□□□ 0.12
NEK4-202ENST00000383721 TRMT44Q8IYL2 757 aaKnown RBP15.82■□□□□ 0.12
NEK4-202ENST00000383721 RNF26Q9BY78 433 aaPredicted RBP15.82■□□□□ 0.12
NEK4-202ENST00000383721 ABCF2Q9UG63 623 aa15.82■□□□□ 0.12
NEK4-202ENST00000383721 PHLPP2Q6ZVD8 1323 aa15.82■□□□□ 0.12
NEK4-202ENST00000383721 WTIPA6NIX2 430 aaPredicted RBP15.82■□□□□ 0.12
NEK4-202ENST00000383721 SPATA20Q8TB22 786 aa15.82■□□□□ 0.12
NEK4-202ENST00000383721 ESR2Q92731 530 aa15.82■□□□□ 0.12
NEK4-202ENST00000383721 FHDC1Q9C0D6 1143 aaPredicted RBP15.82■□□□□ 0.12
NEK4-202ENST00000383721 CEP131Q9UPN4 1083 aa15.82■□□□□ 0.12
NEK4-202ENST00000383721 ZNF804BA4D1E1 1349 aa15.81■□□□□ 0.12
NEK4-202ENST00000383721 KIF13BQ9NQT8 1826 aa15.81■□□□□ 0.12
NEK4-202ENST00000383721 MAGEB6P1A0A0J9YX57 407 aa15.81■□□□□ 0.12
NEK4-202ENST00000383721 PKN1Q16512 942 aa15.81■□□□□ 0.12
NEK4-202ENST00000383721 EARS2Q5JPH6 523 aaKnown RBP15.81■□□□□ 0.12
NEK4-202ENST00000383721 FCHSD1Q86WN1 690 aa15.81■□□□□ 0.12
NEK4-202ENST00000383721 TRIML1Q8N9V2 468 aa15.81■□□□□ 0.12
NEK4-202ENST00000383721 RIOK1Q9BRS2 568 aaKnown RBP15.81■□□□□ 0.12
NEK4-202ENST00000383721 VPS54Q9P1Q0 977 aa15.81■□□□□ 0.12
NEK4-202ENST00000383721 NPR1P16066 1061 aa15.81■□□□□ 0.12
NEK4-202ENST00000383721 HOXA10P31260 410 aaPredicted RBP15.81■□□□□ 0.12
NEK4-202ENST00000383721 GYG1P46976 350 aa15.81■□□□□ 0.12
NEK4-202ENST00000383721 FUT2Q10981 343 aa15.81■□□□□ 0.12
NEK4-202ENST00000383721 ENAHQ8N8S7 591 aaPredicted RBP15.81■□□□□ 0.12
NEK4-202ENST00000383721 MASTLQ96GX5 879 aa15.81■□□□□ 0.12
NEK4-202ENST00000383721 RBM17Q96I25 401 aaKnown RBP15.81■□□□□ 0.12
NEK4-202ENST00000383721 RAI14Q9P0K7 980 aa15.81■□□□□ 0.12
NEK4-202ENST00000383721 DACH1Q9UI36 760 aa15.81■□□□□ 0.12
NEK4-202ENST00000383721 ARHGAP6O43182 974 aa15.8■□□□□ 0.12
NEK4-202ENST00000383721 FAM53CQ9NYF3 392 aa15.8■□□□□ 0.12
NEK4-202ENST00000383721 KIAA1551Q9HCM1 1747 aa15.8■□□□□ 0.12
NEK4-202ENST00000383721 A0A087X0B3 334 aa15.8■□□□□ 0.12
NEK4-202ENST00000383721 CYP2D7A0A087X1C5 515 aa15.8■□□□□ 0.12
NEK4-202ENST00000383721 hCG_1642624A0A1W2PR95 340 aa15.8■□□□□ 0.12
NEK4-202ENST00000383721 H2AFXP16104 143 aaPredicted RBP15.8■□□□□ 0.12
NEK4-202ENST00000383721 CDK11BP21127 795 aaKnown RBP15.8■□□□□ 0.12
NEK4-202ENST00000383721 RPS8P62241 208 aaKnown RBP15.8■□□□□ 0.12
NEK4-202ENST00000383721 GRAPQ13588 217 aa15.8■□□□□ 0.12
NEK4-202ENST00000383721 KANK3Q6NY19 840 aa15.8■□□□□ 0.12
NEK4-202ENST00000383721 TC2NQ8N9U0 490 aa15.8■□□□□ 0.12
NEK4-202ENST00000383721 GRAPLQ8TC17 118 aaPredicted RBP15.8■□□□□ 0.12
NEK4-202ENST00000383721 ZSCAN10Q96SZ4 725 aaPredicted RBP15.8■□□□□ 0.12
NEK4-202ENST00000383721 PHF20Q9BVI0 1012 aa15.8■□□□□ 0.12
NEK4-202ENST00000383721 SAMSN1Q9NSI8 373 aaKnown RBP15.8■□□□□ 0.12
NEK4-202ENST00000383721 ZNF446Q9NWS9 450 aa15.8■□□□□ 0.12
NEK4-202ENST00000383721 ZHX1Q9UKY1 873 aaPredicted RBP15.8■□□□□ 0.12
NEK4-202ENST00000383721 PPP2R2CQ9Y2T4 447 aa15.8■□□□□ 0.12
NEK4-202ENST00000383721 CD2APQ9Y5K6 639 aa15.8■□□□□ 0.12
NEK4-202ENST00000383721 COL1A1P02452 1464 aaPredicted RBP15.79■□□□□ 0.12
NEK4-202ENST00000383721 VWA3AA6NCI4 1184 aa15.79■□□□□ 0.12
NEK4-202ENST00000383721 TRIM75PA6NK02 468 aa15.79■□□□□ 0.12
NEK4-202ENST00000383721 PRDM1O75626 825 aa15.79■□□□□ 0.12
NEK4-202ENST00000383721 PPP2R5BQ15173 497 aa15.79■□□□□ 0.12
NEK4-202ENST00000383721 SPECC1LQ69YQ0 1117 aa15.79■□□□□ 0.12
NEK4-202ENST00000383721 ANKRD18AQ8IVF6 992 aa15.79■□□□□ 0.12
NEK4-202ENST00000383721 CDC5LQ99459 802 aaKnown RBP15.79■□□□□ 0.12
NEK4-202ENST00000383721 BAG1Q99933 345 aaPredicted RBP15.79■□□□□ 0.12
NEK4-202ENST00000383721 NOL10Q9BSC4 688 aaKnown RBP15.79■□□□□ 0.12
NEK4-202ENST00000383721 ZNF219Q9P2Y4 722 aaPredicted RBP15.79■□□□□ 0.12
NEK4-202ENST00000383721 PLCD1P51178 756 aa15.79■□□□□ 0.12
NEK4-202ENST00000383721 DYNLL1P63167 89 aaKnown RBP15.79■□□□□ 0.12
NEK4-202ENST00000383721 AKAP17AQ02040 695 aaKnown RBP15.79■□□□□ 0.12
NEK4-202ENST00000383721 EPSTI1Q96J88 318 aa15.79■□□□□ 0.12
NEK4-202ENST00000383721 AATFQ9NY61 560 aaKnown RBP eCLIP15.79■□□□□ 0.12
NEK4-202ENST00000383721 WNT7AO00755 349 aa15.78■□□□□ 0.12
NEK4-202ENST00000383721 ZSCAN12O43309 604 aa15.78■□□□□ 0.12
NEK4-202ENST00000383721 IGSF3O75054 1194 aa15.78■□□□□ 0.12
NEK4-202ENST00000383721 PLEKHA8P1O95397 391 aa15.78■□□□□ 0.12
NEK4-202ENST00000383721 ADKP55263 362 aaKnown RBP15.78■□□□□ 0.12
NEK4-202ENST00000383721 DHX58Q96C10 678 aa15.78■□□□□ 0.12
NEK4-202ENST00000383721 CRAMP1Q96RY5 1269 aa15.78■□□□□ 0.12
NEK4-202ENST00000383721 PRPF3O43395 683 aaKnown RBP15.78■□□□□ 0.12
NEK4-202ENST00000383721 KRT2P35908 639 aa15.78■□□□□ 0.12
NEK4-202ENST00000383721 TGFB2P61812 414 aa15.78■□□□□ 0.12
NEK4-202ENST00000383721 ZNF384Q8TF68 577 aa15.78■□□□□ 0.12
NEK4-202ENST00000383721 V9GY48 417 aaPredicted RBP15.78■□□□□ 0.12
NEK4-202ENST00000383721 CACNA1SQ13698 1873 aa15.77■□□□□ 0.12
NEK4-202ENST00000383721 STX10O60499 249 aa15.77■□□□□ 0.12
NEK4-202ENST00000383721 XBP1P17861 261 aa15.77■□□□□ 0.12
NEK4-202ENST00000383721 ERCC5P28715 1186 aaPredicted RBP15.77■□□□□ 0.12
NEK4-202ENST00000383721 TROAPQ12815 778 aa15.77■□□□□ 0.12
NEK4-202ENST00000383721 NR1I3Q14994 352 aa15.77■□□□□ 0.12
NEK4-202ENST00000383721 IFIT1BQ5T764 474 aaKnown RBP15.77■□□□□ 0.12
NEK4-202ENST00000383721 STYK1Q6J9G0 422 aa15.77■□□□□ 0.12
NEK4-202ENST00000383721 KRT222Q8N1A0 295 aa15.77■□□□□ 0.12
NEK4-202ENST00000383721 URI1O94763 535 aaPredicted RBP15.77■□□□□ 0.11
NEK4-202ENST00000383721 NOM1Q5C9Z4 860 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms