RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 NAIF1Q69YI7 327 aaPredicted RBP11.87□□□□□ -0.51
CLCN4-202ENST00000380833 MPP4Q96JB8 637 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 AATFQ9NY61 560 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLCN4-202ENST00000380833 hCG_1642624A0A1W2PR95 340 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 B4DLN1 442 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 MRPL12P52815 198 aaKnown RBP11.87□□□□□ -0.51
CLCN4-202ENST00000380833 SLFN5Q08AF3 891 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 KRT79Q5XKE5 535 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 BICC1Q9H694 974 aaKnown RBP11.87□□□□□ -0.51
CLCN4-202ENST00000380833 TTF2Q9UNY4 1162 aaKnown RBP11.87□□□□□ -0.51
CLCN4-202ENST00000380833 KIAA0586Q9BVV6 1533 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 CCT6AP40227 531 aaKnown RBP11.87□□□□□ -0.51
CLCN4-202ENST00000380833 IGBP1P78318 339 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 TFCP2Q12800 502 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 TTC1Q99614 292 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 CCNT1O60563 726 aaKnown RBP11.87□□□□□ -0.51
CLCN4-202ENST00000380833 MAN1A1P33908 653 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 TBC1D9Q6ZT07 1266 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 TAB3Q8N5C8 712 aaPredicted RBP11.87□□□□□ -0.51
CLCN4-202ENST00000380833 TMCO5AQ8N6Q1 288 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 CACTINQ8WUQ7 758 aaKnown RBP11.87□□□□□ -0.51
CLCN4-202ENST00000380833 BZW2Q9Y6E2 419 aaKnown RBP11.87□□□□□ -0.51
CLCN4-202ENST00000380833 GAS8O95995 478 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 FAM89AQ96GI7 184 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 MEIS3Q99687 375 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 IFNKQ9P0W0 207 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 MED10Q9BTT4 135 aa11.87□□□□□ -0.51
CLCN4-202ENST00000380833 DDX41Q9UJV9 622 aaKnown RBP11.87□□□□□ -0.51
CLCN4-202ENST00000380833 TRIM27P14373 513 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 RARSP54136 660 aaKnown RBP11.86□□□□□ -0.51
CLCN4-202ENST00000380833 HHATQ5VTY9 493 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 ANKRD20A3Q5VUR7 823 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 IQCDQ96DY2 449 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 KRT2P35908 639 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 SPAG1Q07617 926 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 APOL6Q9BWW8 343 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 DBNLQ9UJU6 430 aaKnown RBP11.86□□□□□ -0.51
CLCN4-202ENST00000380833 KIF21BO75037 1637 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 VWA3AA6NCI4 1184 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 PARP1P09874 1014 aaKnown RBP11.86□□□□□ -0.51
CLCN4-202ENST00000380833 LONRF3Q496Y0 759 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 TBC1D10BQ4KMP7 808 aaPredicted RBP11.86□□□□□ -0.51
CLCN4-202ENST00000380833 RDH13Q8NBN7 331 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 TMEM51Q9NW97 253 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 CALML3P27482 149 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 ZNF75DP51815 510 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 APBA1Q02410 837 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 CRYMQ14894 314 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 PAG1Q9NWQ8 432 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 M0QZ92 97 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 MRPS15P82914 257 aaKnown RBP11.86□□□□□ -0.51
CLCN4-202ENST00000380833 ITKQ08881 620 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 LRMPQ12912 555 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 IDI1Q13907 227 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 ANKRD20A4Q4UJ75 823 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 ANKRD20A8PQ5CZ79 823 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 ANKRD20A2Q5SQ80 823 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 ANKRD20A1Q5TYW2 823 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 CASC4Q6P4E1 433 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.86□□□□□ -0.51
CLCN4-202ENST00000380833 ANGPTL2Q9UKU9 493 aa11.86□□□□□ -0.51
CLCN4-202ENST00000380833 IL2RBP14784 551 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 ATP1A2P50993 1020 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 ZNF710Q8N1W2 664 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 CFAP61Q8NHU2 1237 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 TRIM11Q96F44 468 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 PARVBQ9HBI1 364 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 RBM8AQ9Y5S9 174 aaKnown RBP11.85□□□□□ -0.51
CLCN4-202ENST00000380833 NDUFB9Q9Y6M9 179 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 EPRSP07814 1512 aaKnown RBP11.85□□□□□ -0.51
CLCN4-202ENST00000380833 LMNAP02545 664 aaKnown RBP11.85□□□□□ -0.51
CLCN4-202ENST00000380833 SLC4A1P02730 911 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 CHGBP05060 677 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 KRT24Q2M2I5 525 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 SKA2Q8WVK7 121 aaPredicted RBP11.85□□□□□ -0.51
CLCN4-202ENST00000380833 ZNF594Q96JF6 807 aaPredicted RBP11.85□□□□□ -0.51
CLCN4-202ENST00000380833 OSBPL1AQ9BXW6 950 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 ARMT1Q9H993 441 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 IQCA1LA6NCM1 817 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 PTPROQ16827 1216 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 SRLQ86TD4 932 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 EYA3Q99504 573 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 LRRC27Q9C0I9 530 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 WDR44Q5JSH3 913 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 CHMP6Q96FZ7 201 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 MAGED2Q9UNF1 606 aaPredicted RBP11.85□□□□□ -0.51
CLCN4-202ENST00000380833 TCP10L2B9ZVM9 353 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 H0YIN7 160 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 DKC1O60832 514 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLCN4-202ENST00000380833 PPP1R16BQ96T49 567 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 TRIM31Q9BZY9 425 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 RMND1Q9NWS8 449 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 CTNND2Q9UQB3 1225 aa11.85□□□□□ -0.51
CLCN4-202ENST00000380833 FNDC3AQ9Y2H6 1198 aaKnown RBP11.85□□□□□ -0.51
CLCN4-202ENST00000380833 E9PMD0 336 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 GNAT2P19087 354 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 DPP8Q6V1X1 898 aaPredicted RBP11.84□□□□□ -0.51
CLCN4-202ENST00000380833 PARP9Q8IXQ6 854 aa11.84□□□□□ -0.51
CLCN4-202ENST00000380833 GPR101Q96P66 508 aaPredicted RBP11.84□□□□□ -0.51
CLCN4-202ENST00000380833 DNAJC5Q9H3Z4 198 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms