RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 GRM1Q13255 1194 aa17.77■□□□□ 0.44
COL2A1-202ENST00000380518 C2CD5Q86YS7 1000 aa17.77■□□□□ 0.44
COL2A1-202ENST00000380518 GJA3Q9Y6H8 435 aa17.77■□□□□ 0.44
COL2A1-202ENST00000380518 CCDC105Q8IYK2 499 aa17.77■□□□□ 0.44
COL2A1-202ENST00000380518 BLIDQ8IZY5 108 aa17.77■□□□□ 0.44
COL2A1-202ENST00000380518 FAM184BQ9ULE4 1060 aa17.77■□□□□ 0.44
COL2A1-202ENST00000380518 CFAP57Q96MR6 1250 aa17.77■□□□□ 0.43
COL2A1-202ENST00000380518 ZSCAN10Q96SZ4 725 aaPredicted RBP17.77■□□□□ 0.43
COL2A1-202ENST00000380518 ERBB4Q15303 1308 aa17.77■□□□□ 0.43
COL2A1-202ENST00000380518 HSPA1LP34931 641 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 ATP11AP98196 1134 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 MAIP1Q8WWC4 291 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 FEZ2Q9UHY8 353 aaPredicted RBP17.76■□□□□ 0.43
COL2A1-202ENST00000380518 ADD1P35611 737 aaKnown RBP17.76■□□□□ 0.43
COL2A1-202ENST00000380518 GABPB2Q8TAK5 448 aaPredicted RBP17.76■□□□□ 0.43
COL2A1-202ENST00000380518 MRRFQ96E11 262 aaKnown RBP17.76■□□□□ 0.43
COL2A1-202ENST00000380518 CABS1Q96KC9 395 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 IWS1Q96ST2 819 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 AZI2Q9H6S1 392 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 ZMYM6O95789 1325 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 WHAMMP3Q1A5X7 153 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 LARGE2Q8N3Y3 721 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 SUPT20HQ8NEM7 779 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 TRIM58Q8NG06 486 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 KCNJ18B7U540 433 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 GMNNO75496 209 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 CD19P15391 556 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 KCNJ12Q14500 433 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 NEDD9Q14511 834 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 MCTP2Q6DN12 878 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 RNF34Q969K3 372 aa17.76■□□□□ 0.43
COL2A1-202ENST00000380518 H0YIN7 160 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 DAPK3O43293 454 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 DNM2P50570 870 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 TPD52P55327 224 aaPredicted RBP17.75■□□□□ 0.43
COL2A1-202ENST00000380518 STK32BQ9NY57 414 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 IRX5P78411 483 aaPredicted RBP17.75■□□□□ 0.43
COL2A1-202ENST00000380518 TCP10Q12799 353 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 GPIHBP1Q8IV16 184 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 MYOCDQ8IZQ8 938 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 MRFAP1L1Q96HT8 127 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 USTQ9Y2C2 406 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 ATP7AQ04656 1500 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 PDE6BP35913 854 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 STAT1P42224 750 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 ITIH3Q06033 890 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 BRD3Q15059 726 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 BIN2Q9UBW5 565 aaPredicted RBP17.75■□□□□ 0.43
COL2A1-202ENST00000380518 XRCC5P13010 732 aaKnown RBP17.75■□□□□ 0.43
COL2A1-202ENST00000380518 ARHGAP25P42331 645 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 RBM6P78332 1123 aaKnown RBP17.75■□□□□ 0.43
COL2A1-202ENST00000380518 LGSNQ5TDP6 509 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 VSIG1Q86XK7 387 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 RAB17Q9H0T7 212 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 LMTK3Q96Q04 1460 aa17.75■□□□□ 0.43
COL2A1-202ENST00000380518 PLXNC1O60486 1568 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 ATP10AO60312 1499 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 RGS12O14924 1447 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 TNKSO95271 1327 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 KCNQ3O43525 872 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 NOL3O60936 208 aaKnown RBP17.74■□□□□ 0.43
COL2A1-202ENST00000380518 OAS2P29728 719 aaKnown RBP17.74■□□□□ 0.43
COL2A1-202ENST00000380518 HHATQ5VTY9 493 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 CCDC24Q8N4L8 307 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 PCDHB13Q9Y5F0 798 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 IVNS1ABPQ9Y6Y0 642 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 PHKG2P15735 406 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 MORC3Q14149 939 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 GEN1Q17RS7 908 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 KRT71Q3SY84 523 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 VPS52Q8N1B4 723 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 PLCB1Q9NQ66 1216 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 DDX41Q9UJV9 622 aaKnown RBP17.74■□□□□ 0.43
COL2A1-202ENST00000380518 GINS2Q9Y248 185 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 GAS7O60861 476 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 FGAP02671 866 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 ERCC6LQ2NKX8 1250 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 ZBTB38Q8NAP3 1195 aaPredicted RBP17.74■□□□□ 0.43
COL2A1-202ENST00000380518 CHURC1Q8WUH1 139 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 AMFRQ9UKV5 643 aa17.74■□□□□ 0.43
COL2A1-202ENST00000380518 H7C1D1 291 aa17.73■□□□□ 0.43
COL2A1-202ENST00000380518 PCCAP05165 728 aaPredicted RBP17.73■□□□□ 0.43
COL2A1-202ENST00000380518 ARHGAP44Q17R89 818 aa17.73■□□□□ 0.43
COL2A1-202ENST00000380518 MFSD14BQ5SR56 506 aa17.73■□□□□ 0.43
COL2A1-202ENST00000380518 TPH2Q8IWU9 490 aa17.73■□□□□ 0.43
COL2A1-202ENST00000380518 CCT6BQ92526 530 aa17.73■□□□□ 0.43
COL2A1-202ENST00000380518 STAP2Q9UGK3 403 aa17.73■□□□□ 0.43
COL2A1-202ENST00000380518 PARP2Q9UGN5 583 aa17.73■□□□□ 0.43
COL2A1-202ENST00000380518 MKRN1Q9UHC7 482 aaKnown RBP17.73■□□□□ 0.43
COL2A1-202ENST00000380518 GALNT17Q6IS24 598 aa17.73■□□□□ 0.43
COL2A1-202ENST00000380518 CACNA2D3Q8IZS8 1091 aa17.73■□□□□ 0.43
COL2A1-202ENST00000380518 UIMC1Q96RL1 719 aa17.73■□□□□ 0.43
COL2A1-202ENST00000380518 TRIM6Q9C030 488 aaPredicted RBP17.73■□□□□ 0.43
COL2A1-202ENST00000380518 ETF1P62495 437 aaKnown RBP17.73■□□□□ 0.43
COL2A1-202ENST00000380518 PNMA1Q8ND90 353 aa17.73■□□□□ 0.43
COL2A1-202ENST00000380518 COPRSQ9NQ92 184 aa17.73■□□□□ 0.43
COL2A1-202ENST00000380518 PCDHA7Q9UN72 937 aa17.73■□□□□ 0.43
COL2A1-202ENST00000380518 GPBP1Q86WP2 473 aa17.73■□□□□ 0.43
COL2A1-202ENST00000380518 LSM14BQ9BX40 385 aaKnown RBP17.73■□□□□ 0.43
COL2A1-202ENST00000380518 FAM135BQ49AJ0 1406 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms