RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 SPDL1Q96EA4 605 aa8.1□□□□□ -1.11
DDX58-202ENST00000379883 FAXDC2Q96IV6 333 aa8.1□□□□□ -1.11
DDX58-202ENST00000379883 CEP170BQ9Y4F5 1589 aaPredicted RBP8.09□□□□□ -1.11
DDX58-202ENST00000379883 NEDD4P46934 1319 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 GMNCA6NCL1 334 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 ATP1A1P05023 1023 aaKnown RBP8.09□□□□□ -1.11
DDX58-202ENST00000379883 HSPD1P10809 573 aaKnown RBP8.09□□□□□ -1.11
DDX58-202ENST00000379883 KIF5BP33176 963 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 CCT6AP40227 531 aaKnown RBP8.09□□□□□ -1.11
DDX58-202ENST00000379883 CAPRIN2Q6IMN6 1127 aaKnown RBP8.09□□□□□ -1.11
DDX58-202ENST00000379883 CHST3Q7LGC8 479 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 IL17REQ8NFR9 667 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 LRRC45Q96CN5 670 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 ATP6V1G3Q96LB4 118 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 TEX13AQ9BXU3 409 aaPredicted RBP8.09□□□□□ -1.11
DDX58-202ENST00000379883 DNAJC5BQ9UF47 199 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 LIMA1Q9UHB6 759 aaKnown RBP8.09□□□□□ -1.11
DDX58-202ENST00000379883 BAIAP2L1Q9UHR4 511 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 GYPCP04921 128 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 GHRP10912 638 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 SARSP49591 514 aaKnown RBP8.09□□□□□ -1.11
DDX58-202ENST00000379883 C2orf54Q08AI8 447 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 ZMYM1Q5SVZ6 1142 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 RRAGBQ5VZM2 374 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 MYCBPAPQ8TBZ2 947 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 CCDC43Q96MW1 224 aaKnown RBP8.09□□□□□ -1.11
DDX58-202ENST00000379883 TBC1D2BQ9UPU7 963 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 FRMD3A2A2Y4 597 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 KIF28PB7ZC32 967 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 RPSAP08865 295 aaKnown RBP8.09□□□□□ -1.11
DDX58-202ENST00000379883 PRLRP16471 622 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 MATR3P43243 847 aaKnown RBP eCLIP8.09□□□□□ -1.11
DDX58-202ENST00000379883 PTPAQ15257 358 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 CCDC96Q2M329 555 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 TXNDC2Q86VQ3 553 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 RETREG2Q8NC44 543 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 OSBPL9Q96SU4 736 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 MOV10L1Q9BXT6 1211 aaKnown RBP8.09□□□□□ -1.11
DDX58-202ENST00000379883 COPRSQ9NQ92 184 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 NOP53Q9NZM5 478 aaKnown RBP8.09□□□□□ -1.11
DDX58-202ENST00000379883 CACNA1FO60840 1977 aa8.09□□□□□ -1.11
DDX58-202ENST00000379883 CFAP73A6NFT4 308 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 SNUPNO95149 360 aaKnown RBP8.08□□□□□ -1.12
DDX58-202ENST00000379883 CFAP221Q4G0U5 840 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 NBPF10Q6P3W6 841 aaKnown RBP8.08□□□□□ -1.12
DDX58-202ENST00000379883 NOSTRINQ8IVI9 506 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 FAM114A1Q8IWE2 563 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 FUKQ8N0W3 1084 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 MAB21L3Q8N8X9 362 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 NSRP1Q9H0G5 558 aaKnown RBP8.08□□□□□ -1.12
DDX58-202ENST00000379883 VPS16Q9H269 839 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 PPANQ9NQ55 473 aaKnown RBP8.08□□□□□ -1.12
DDX58-202ENST00000379883 CTNND2Q9UQB3 1225 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 ZNF609O15014 1411 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 ACEP12821 1306 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 GOLGA8AA7E2F4 631 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 PTPREP23469 700 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 PBX1P40424 430 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 MDM2Q00987 491 aaPredicted RBP8.08□□□□□ -1.12
DDX58-202ENST00000379883 TFCP2Q12800 502 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 PAK1Q13153 545 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 BIRC3Q13489 604 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 MTMR3Q13615 1198 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 ZNF827Q17R98 1081 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 C1orf141Q5JVX7 400 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 KCTD16Q68DU8 428 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 CRELD2Q6UXH1 353 aaPredicted RBP8.08□□□□□ -1.12
DDX58-202ENST00000379883 CD302Q8IX05 232 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 GSPT2Q8IYD1 628 aaKnown RBP8.08□□□□□ -1.12
DDX58-202ENST00000379883 CCDC42Q96M95 316 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 DDX20Q9UHI6 824 aaKnown RBP8.08□□□□□ -1.12
DDX58-202ENST00000379883 FAM208AQ9UK61 1670 aaKnown RBP8.08□□□□□ -1.12
DDX58-202ENST00000379883 KCNJ18B7U540 433 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 ZBTB43O43298 467 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 FXR1P51114 621 aaKnown RBP eCLIP8.08□□□□□ -1.12
DDX58-202ENST00000379883 KCNJ12Q14500 433 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 CDKAL1Q5VV42 579 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 LRIG3Q6UXM1 1119 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 MICAL1Q8TDZ2 1067 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 NUP133Q8WUM0 1156 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 CUL5Q93034 780 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 CYFIP2Q96F07 1278 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 RNPC3Q96LT9 517 aaKnown RBP8.08□□□□□ -1.12
DDX58-202ENST00000379883 HDAC6Q9UBN7 1215 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 RWDD2AQ9UIY3 292 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 USP31Q70CQ4 1352 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 PALLDQ8WX93 1383 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 H7C1D1 291 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 IFIT1P09914 478 aaKnown RBP8.08□□□□□ -1.12
DDX58-202ENST00000379883 SETSIPP0DME0 302 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 TRIM21P19474 475 aaKnown RBP8.08□□□□□ -1.12
DDX58-202ENST00000379883 ERVK-24P63145 666 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 TNNC1P63316 161 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 PPP1R7Q15435 360 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 CWF19L2Q2TBE0 894 aaKnown RBP8.08□□□□□ -1.12
DDX58-202ENST00000379883 CCDC63Q8NA47 563 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 TBC1D31Q96DN5 1066 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 EDC3Q96F86 508 aaKnown RBP8.08□□□□□ -1.12
DDX58-202ENST00000379883 KDM4CQ9H3R0 1056 aa8.08□□□□□ -1.12
DDX58-202ENST00000379883 INCENPQ9NQS7 918 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms