RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 NOP58Q9Y2X3 529 aaKnown RBP21.6■■□□□ 1.05
PDLIM4-202ENST00000379018 UNC80Q8N2C7 3258 aa21.6■■□□□ 1.05
PDLIM4-202ENST00000379018 LTBP2Q14767 1821 aa21.59■■□□□ 1.05
PDLIM4-202ENST00000379018 IGSF3O75054 1194 aa21.59■■□□□ 1.05
PDLIM4-202ENST00000379018 MCM9Q9NXL9 1143 aa21.59■■□□□ 1.05
PDLIM4-202ENST00000379018 POTEB2H3BUK9 544 aa21.58■■□□□ 1.05
PDLIM4-202ENST00000379018 ERCC3P19447 782 aa21.58■■□□□ 1.05
PDLIM4-202ENST00000379018 PRAMEF19Q5SWL8 479 aa21.58■■□□□ 1.05
PDLIM4-202ENST00000379018 FERMT2Q96AC1 680 aa21.58■■□□□ 1.05
PDLIM4-202ENST00000379018 RIOK1Q9BRS2 568 aaKnown RBP21.58■■□□□ 1.05
PDLIM4-202ENST00000379018 SPATC1LQ9H0A9 340 aa21.58■■□□□ 1.05
PDLIM4-202ENST00000379018 RLFQ13129 1914 aa21.58■■□□□ 1.04
PDLIM4-202ENST00000379018 A0A1W2PRG0 241 aa21.57■■□□□ 1.04
PDLIM4-202ENST00000379018 COG2Q14746 738 aa21.57■■□□□ 1.04
PDLIM4-202ENST00000379018 TRIM60Q495X7 471 aa21.57■■□□□ 1.04
PDLIM4-202ENST00000379018 NCAPG2Q86XI2 1143 aa21.57■■□□□ 1.04
PDLIM4-202ENST00000379018 CLEC10AQ8IUN9 316 aa21.57■■□□□ 1.04
PDLIM4-202ENST00000379018 SLC44A5Q8NCS7 719 aa21.57■■□□□ 1.04
PDLIM4-202ENST00000379018 ARRDC4Q8NCT1 418 aa21.57■■□□□ 1.04
PDLIM4-202ENST00000379018 SDR42E1Q8WUS8 393 aa21.57■■□□□ 1.04
PDLIM4-202ENST00000379018 CRNKL1Q9BZJ0 848 aaKnown RBP21.57■■□□□ 1.04
PDLIM4-202ENST00000379018 IL1RAPL2Q9NP60 686 aa21.57■■□□□ 1.04
PDLIM4-202ENST00000379018 APBB1O00213 710 aa21.56■■□□□ 1.04
PDLIM4-202ENST00000379018 COBLO75128 1261 aa21.56■■□□□ 1.04
PDLIM4-202ENST00000379018 CYP2D6P10635 497 aa21.56■■□□□ 1.04
PDLIM4-202ENST00000379018 RLBP1P12271 317 aa21.56■■□□□ 1.04
PDLIM4-202ENST00000379018 SHHQ15465 462 aa21.56■■□□□ 1.04
PDLIM4-202ENST00000379018 C9orf50Q5SZB4 431 aa21.56■■□□□ 1.04
PDLIM4-202ENST00000379018 FAM109BQ6ICB4 259 aaPredicted RBP21.56■■□□□ 1.04
PDLIM4-202ENST00000379018 SLC39A5Q6ZMH5 540 aa21.56■■□□□ 1.04
PDLIM4-202ENST00000379018 SPICE1Q8N0Z3 855 aa21.56■■□□□ 1.04
PDLIM4-202ENST00000379018 BADQ92934 168 aa21.56■■□□□ 1.04
PDLIM4-202ENST00000379018 DNAJC2Q99543 621 aaKnown RBP21.56■■□□□ 1.04
PDLIM4-202ENST00000379018 HOXC10Q9NYD6 342 aa21.56■■□□□ 1.04
PDLIM4-202ENST00000379018 MYH8P13535 1937 aa21.56■■□□□ 1.04
PDLIM4-202ENST00000379018 FLOT1O75955 427 aa21.55■■□□□ 1.04
PDLIM4-202ENST00000379018 PDE6AP16499 860 aa21.55■■□□□ 1.04
PDLIM4-202ENST00000379018 KIAA1755Q5JYT7 1200 aa21.55■■□□□ 1.04
PDLIM4-202ENST00000379018 SLC9C2Q5TAH2 1124 aa21.55■■□□□ 1.04
PDLIM4-202ENST00000379018 OLFML2BQ68BL8 750 aa21.55■■□□□ 1.04
PDLIM4-202ENST00000379018 ZNF236Q9UL36 1845 aa21.55■■□□□ 1.04
PDLIM4-202ENST00000379018 SEPT4O43236 478 aa21.54■■□□□ 1.04
PDLIM4-202ENST00000379018 ADCYAP1R1P41586 468 aa21.54■■□□□ 1.04
PDLIM4-202ENST00000379018 GABPAQ06546 454 aa21.54■■□□□ 1.04
PDLIM4-202ENST00000379018 FAM47AQ5JRC9 791 aa21.54■■□□□ 1.04
PDLIM4-202ENST00000379018 CEP85Q6P2H3 762 aa21.54■■□□□ 1.04
PDLIM4-202ENST00000379018 ATG4CQ96DT6 458 aa21.54■■□□□ 1.04
PDLIM4-202ENST00000379018 DYNLL2Q96FJ2 89 aa21.54■■□□□ 1.04
PDLIM4-202ENST00000379018 SLC5A4Q9NY91 659 aa21.54■■□□□ 1.04
PDLIM4-202ENST00000379018 ZNF532Q9HCE3 1301 aa21.54■■□□□ 1.04
PDLIM4-202ENST00000379018 A0A0G2JMZ2 1700 aa21.53■■□□□ 1.04
PDLIM4-202ENST00000379018 CCER2I3L3R5 266 aa21.53■■□□□ 1.04
PDLIM4-202ENST00000379018 STRNO43815 780 aa21.53■■□□□ 1.04
PDLIM4-202ENST00000379018 SH3RF1Q7Z6J0 888 aa21.53■■□□□ 1.04
PDLIM4-202ENST00000379018 ERC1Q8IUD2 1116 aa21.53■■□□□ 1.04
PDLIM4-202ENST00000379018 LCORLQ8N3X6 602 aa21.53■■□□□ 1.04
PDLIM4-202ENST00000379018 CDX2Q99626 313 aaPredicted RBP21.53■■□□□ 1.04
PDLIM4-202ENST00000379018 GOLIM4O00461 696 aa21.52■■□□□ 1.04
PDLIM4-202ENST00000379018 LRRC41Q15345 812 aa21.52■■□□□ 1.04
PDLIM4-202ENST00000379018 TTF1Q15361 905 aaPredicted RBP21.52■■□□□ 1.04
PDLIM4-202ENST00000379018 TMEM179Q6ZVK1 233 aa21.52■■□□□ 1.04
PDLIM4-202ENST00000379018 SHCBP1Q8NEM2 672 aa21.52■■□□□ 1.04
PDLIM4-202ENST00000379018 PDLIM7Q9NR12 457 aa21.52■■□□□ 1.04
PDLIM4-202ENST00000379018 RAD21O60216 631 aa21.51■■□□□ 1.03
PDLIM4-202ENST00000379018 IGHA2P01877 340 aa21.51■■□□□ 1.03
PDLIM4-202ENST00000379018 AKR1B1P15121 316 aa21.51■■□□□ 1.03
PDLIM4-202ENST00000379018 DSG3P32926 999 aa21.51■■□□□ 1.03
PDLIM4-202ENST00000379018 ICA1Q05084 483 aa21.51■■□□□ 1.03
PDLIM4-202ENST00000379018 MYLIPQ8WY64 445 aa21.51■■□□□ 1.03
PDLIM4-202ENST00000379018 ARMT1Q9H993 441 aa21.51■■□□□ 1.03
PDLIM4-202ENST00000379018 ARHGEF10LQ9HCE6 1279 aa21.51■■□□□ 1.03
PDLIM4-202ENST00000379018 DCP1AQ9NPI6 582 aaPredicted RBP21.51■■□□□ 1.03
PDLIM4-202ENST00000379018 SMCHD1A6NHR9 2005 aa21.51■■□□□ 1.03
PDLIM4-202ENST00000379018 ZNFX1Q9P2E3 1918 aaKnown RBP21.51■■□□□ 1.03
PDLIM4-202ENST00000379018 BAZ2AQ9UIF9 1905 aaKnown RBP21.51■■□□□ 1.03
PDLIM4-202ENST00000379018 TRIM43BA6NCK2 446 aa21.5■■□□□ 1.03
PDLIM4-202ENST00000379018 MB21D1Q8N884 522 aa21.5■■□□□ 1.03
PDLIM4-202ENST00000379018 MAFAQ8NHW3 353 aaPredicted RBP21.5■■□□□ 1.03
PDLIM4-202ENST00000379018 TRIM43Q96BQ3 446 aaPredicted RBP21.5■■□□□ 1.03
PDLIM4-202ENST00000379018 MAML3Q96JK9 1138 aa21.5■■□□□ 1.03
PDLIM4-202ENST00000379018 SEMA6BQ9H3T3 888 aa21.5■■□□□ 1.03
PDLIM4-202ENST00000379018 MROH8Q9H579 483 aa21.5■■□□□ 1.03
PDLIM4-202ENST00000379018 PRKAB2O43741 272 aa21.49■■□□□ 1.03
PDLIM4-202ENST00000379018 PGK2P07205 417 aa21.49■■□□□ 1.03
PDLIM4-202ENST00000379018 FCER1AP12319 257 aa21.49■■□□□ 1.03
PDLIM4-202ENST00000379018 SLFNL1Q499Z3 407 aa21.49■■□□□ 1.03
PDLIM4-202ENST00000379018 TMED8Q6PL24 325 aaPredicted RBP21.49■■□□□ 1.03
PDLIM4-202ENST00000379018 COL11A1P12107 1806 aaPredicted RBP21.49■■□□□ 1.03
PDLIM4-202ENST00000379018 EYSQ5T1H1 3165 aa21.48■■□□□ 1.03
PDLIM4-202ENST00000379018 CYP2D7A0A087X1C5 515 aa21.48■■□□□ 1.03
PDLIM4-202ENST00000379018 TLE2Q04725 743 aa21.48■■□□□ 1.03
PDLIM4-202ENST00000379018 RHPN1Q8TCX5 695 aa21.48■■□□□ 1.03
PDLIM4-202ENST00000379018 MMP19Q99542 508 aa21.48■■□□□ 1.03
PDLIM4-202ENST00000379018 SH2D4AQ9H788 454 aa21.48■■□□□ 1.03
PDLIM4-202ENST00000379018 VCPKMTQ9H867 229 aa21.48■■□□□ 1.03
PDLIM4-202ENST00000379018 XPNPEP3Q9NQH7 507 aa21.48■■□□□ 1.03
PDLIM4-202ENST00000379018 SMIM22K7EJ46 135 aa21.47■■□□□ 1.03
PDLIM4-202ENST00000379018 PQBP1O60828 265 aaKnown RBP21.47■■□□□ 1.03
PDLIM4-202ENST00000379018 MBD4O95243 580 aa21.47■■□□□ 1.03
PDLIM4-202ENST00000379018 PGK1P00558 417 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms