RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 CAPN11Q9UMQ6 739 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 SCINQ9Y6U3 715 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 STAM2O75886 525 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 ASPHQ12797 758 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 CAPRIN1Q14444 709 aaKnown RBP14.6□□□□□ -0.07
HIPK3-202ENST00000379016 ADAT2Q7Z6V5 191 aaKnown RBP14.6□□□□□ -0.07
HIPK3-202ENST00000379016 DDX42Q86XP3 938 aaKnown RBP eCLIP14.6□□□□□ -0.07
HIPK3-202ENST00000379016 PRKAG2Q9UGJ0 569 aa14.6□□□□□ -0.07
HIPK3-202ENST00000379016 SART1O43290 800 aaKnown RBP14.59□□□□□ -0.07
HIPK3-202ENST00000379016 MAN1A2O60476 641 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 GUCY2FP51841 1108 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 KCTD17Q8N5Z5 321 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 GOLGA5Q8TBA6 731 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 CABLES1Q8TDN4 633 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 DACT1Q9NYF0 836 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 RGS16O15492 202 aaPredicted RBP14.59□□□□□ -0.07
HIPK3-202ENST00000379016 CLTAP09496 248 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 CCDC159P0C7I6 412 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 ZSCAN9O15535 394 aaPredicted RBP14.59□□□□□ -0.07
HIPK3-202ENST00000379016 GARSP41250 739 aaKnown RBP14.59□□□□□ -0.07
HIPK3-202ENST00000379016 TCIRG1Q13488 830 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 HS1BP3Q53T59 392 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 USP48Q86UV5 1035 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 P3H4Q92791 437 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 BAZ1AQ9NRL2 1556 aaPredicted RBP14.59□□□□□ -0.07
HIPK3-202ENST00000379016 E9PMD0 336 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 UVSSAQ2YD98 709 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 TJAP1Q5JTD0 557 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 KCNH5Q8NCM2 988 aa14.59□□□□□ -0.07
HIPK3-202ENST00000379016 ZSCAN22P10073 491 aaPredicted RBP14.58□□□□□ -0.07
HIPK3-202ENST00000379016 EEF1GP26641 437 aaKnown RBP14.58□□□□□ -0.07
HIPK3-202ENST00000379016 TUBB4BP68371 445 aa14.58□□□□□ -0.07
HIPK3-202ENST00000379016 LRCH2Q5VUJ6 765 aa14.58□□□□□ -0.07
HIPK3-202ENST00000379016 NAPGQ99747 312 aaPredicted RBP14.58□□□□□ -0.07
HIPK3-202ENST00000379016 POLKQ9UBT6 870 aa14.58□□□□□ -0.07
HIPK3-202ENST00000379016 DIAPH2O60879 1101 aa14.58□□□□□ -0.07
HIPK3-202ENST00000379016 BCRP11274 1271 aa14.58□□□□□ -0.07
HIPK3-202ENST00000379016 KCNA1Q09470 495 aa14.58□□□□□ -0.07
HIPK3-202ENST00000379016 PTK2BQ14289 1009 aa14.58□□□□□ -0.07
HIPK3-202ENST00000379016 GJC2Q5T442 439 aaPredicted RBP14.58□□□□□ -0.07
HIPK3-202ENST00000379016 THEGQ9P2T0 379 aa14.58□□□□□ -0.07
HIPK3-202ENST00000379016 SLC4A7Q9Y6M7 1214 aa14.58□□□□□ -0.07
HIPK3-202ENST00000379016 CADPSQ9ULU8 1353 aa14.58□□□□□ -0.07
HIPK3-202ENST00000379016 LMNB2Q03252 620 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 KRT71Q3SY84 523 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 B4GALNT2Q8NHY0 566 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 TEKT4Q8WW24 435 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 NRBF2Q96F24 287 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 ARHGEF10LQ9HCE6 1279 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 CCPG1Q9ULG6 757 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 SPTLC2O15270 562 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 SLC9C2Q5TAH2 1124 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 ABI1Q8IZP0 508 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 BBOF1Q8ND07 529 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 SOX5P35711 763 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 STX1BP61266 288 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 LONRF2Q1L5Z9 754 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 CCDC184Q52MB2 194 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 KRT28Q7Z3Y7 464 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 SNX19Q92543 992 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 RAPGEF5Q92565 580 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 CPSF3Q9UKF6 684 aaKnown RBP14.58□□□□□ -0.08
HIPK3-202ENST00000379016 SKIP12755 728 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 ARPP19P56211 112 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 ANGPT1Q15389 498 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 YIPF2Q9BWQ6 316 aa14.58□□□□□ -0.08
HIPK3-202ENST00000379016 NIP7Q9Y221 180 aaKnown RBP eCLIP14.58□□□□□ -0.08
HIPK3-202ENST00000379016 RTL9Q8NET4 1388 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 PEX26Q7Z412 305 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 TRPC6Q9Y210 931 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 KLHL14Q9P2G3 628 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 TMEM247A6NEH6 219 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 ORC4O43929 436 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 ADCY8P40145 1251 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 UHMK1Q8TAS1 419 aaKnown RBP14.57□□□□□ -0.08
HIPK3-202ENST00000379016 DDX17Q92841 729 aaKnown RBP14.57□□□□□ -0.08
HIPK3-202ENST00000379016 HMG20BQ9P0W2 317 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 LIG3P49916 1009 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 C20orf194Q5TEA3 1177 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 GLG1Q92896 1179 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 HAUS1Q96CS2 278 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 TRIM8Q9BZR9 551 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 ECHDC1Q9NTX5 307 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 GDAP1L1Q96MZ0 367 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 MAP2K2P36507 400 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 DNM1Q05193 864 aaKnown RBP14.57□□□□□ -0.08
HIPK3-202ENST00000379016 KRT27Q7Z3Y8 459 aa14.57□□□□□ -0.08
HIPK3-202ENST00000379016 UBXN8O00124 270 aa14.56□□□□□ -0.08
HIPK3-202ENST00000379016 CAVIN2O95810 425 aa14.56□□□□□ -0.08
HIPK3-202ENST00000379016 ARHGAP25P42331 645 aa14.56□□□□□ -0.08
HIPK3-202ENST00000379016 SLC9C1Q4G0N8 1177 aa14.56□□□□□ -0.08
HIPK3-202ENST00000379016 AP1ARQ63HQ0 302 aa14.56□□□□□ -0.08
HIPK3-202ENST00000379016 RAB20Q9NX57 234 aa14.56□□□□□ -0.08
HIPK3-202ENST00000379016 LDHBP07195 334 aaKnown RBP14.56□□□□□ -0.08
HIPK3-202ENST00000379016 TXKP42681 527 aa14.56□□□□□ -0.08
HIPK3-202ENST00000379016 SF3B3Q15393 1217 aaKnown RBP14.56□□□□□ -0.08
HIPK3-202ENST00000379016 CACTINQ8WUQ7 758 aaKnown RBP14.56□□□□□ -0.08
HIPK3-202ENST00000379016 MRFAP1L1Q96HT8 127 aa14.56□□□□□ -0.08
HIPK3-202ENST00000379016 RUSC2Q8N2Y8 1516 aa14.56□□□□□ -0.08
HIPK3-202ENST00000379016 NBPF14Q5TI25 921 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms