RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 ARMC5Q96C12 935 aa16.32■□□□□ 0.2
UPK1A-202ENST00000379013 JAKMIP1Q96N16 626 aaKnown RBP16.32■□□□□ 0.2
UPK1A-202ENST00000379013 UBAC1Q9BSL1 405 aa16.32■□□□□ 0.2
UPK1A-202ENST00000379013 CYP46A1Q9Y6A2 500 aa16.32■□□□□ 0.2
UPK1A-202ENST00000379013 GREB1LQ9C091 1923 aaPredicted RBP16.31■□□□□ 0.2
UPK1A-202ENST00000379013 MYH4Q9Y623 1939 aa16.31■□□□□ 0.2
UPK1A-202ENST00000379013 PLIN4Q96Q06 1357 aa16.31■□□□□ 0.2
UPK1A-202ENST00000379013 RANBP6O60518 1105 aaKnown RBP16.31■□□□□ 0.2
UPK1A-202ENST00000379013 PEX10O60683 326 aa16.31■□□□□ 0.2
UPK1A-202ENST00000379013 GDF11O95390 407 aa16.31■□□□□ 0.2
UPK1A-202ENST00000379013 CASTP20810 708 aaKnown RBP16.31■□□□□ 0.2
UPK1A-202ENST00000379013 PSMC4P43686 418 aa16.31■□□□□ 0.2
UPK1A-202ENST00000379013 FGD1P98174 961 aa16.31■□□□□ 0.2
UPK1A-202ENST00000379013 RRP12Q5JTH9 1297 aaKnown RBP16.31■□□□□ 0.2
UPK1A-202ENST00000379013 TATDN1Q6P1N9 297 aa16.31■□□□□ 0.2
UPK1A-202ENST00000379013 POTEEQ6S8J3 1075 aa16.31■□□□□ 0.2
UPK1A-202ENST00000379013 FASTKD5Q7L8L6 764 aaKnown RBP16.31■□□□□ 0.2
UPK1A-202ENST00000379013 ZNF280CQ8ND82 737 aa16.31■□□□□ 0.2
UPK1A-202ENST00000379013 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.31■□□□□ 0.2
UPK1A-202ENST00000379013 USP17L5A8MUK1 530 aa16.3■□□□□ 0.2
UPK1A-202ENST00000379013 ST18O60284 1047 aa16.3■□□□□ 0.2
UPK1A-202ENST00000379013 ASNSP08243 561 aa16.3■□□□□ 0.2
UPK1A-202ENST00000379013 HMGCS2P54868 508 aa16.3■□□□□ 0.2
UPK1A-202ENST00000379013 TMEM179Q6ZVK1 233 aa16.3■□□□□ 0.2
UPK1A-202ENST00000379013 DHX32Q7L7V1 743 aaKnown RBP16.3■□□□□ 0.2
UPK1A-202ENST00000379013 SH3TC2Q8TF17 1288 aa16.3■□□□□ 0.2
UPK1A-202ENST00000379013 DYNLL2Q96FJ2 89 aa16.3■□□□□ 0.2
UPK1A-202ENST00000379013 TMEM87BQ96K49 555 aa16.3■□□□□ 0.2
UPK1A-202ENST00000379013 TBC1D2Q9BYX2 928 aa16.3■□□□□ 0.2
UPK1A-202ENST00000379013 NEDD4P46934 1319 aa16.29■□□□□ 0.2
UPK1A-202ENST00000379013 B4E1Z4 1266 aa16.29■□□□□ 0.2
UPK1A-202ENST00000379013 MYCP01106 439 aaPredicted RBP16.29■□□□□ 0.2
UPK1A-202ENST00000379013 EN2P19622 333 aaPredicted RBP16.29■□□□□ 0.2
UPK1A-202ENST00000379013 OSBPP22059 807 aa16.29■□□□□ 0.2
UPK1A-202ENST00000379013 SHMT1P34896 483 aa16.29■□□□□ 0.2
UPK1A-202ENST00000379013 ANKRD1Q15327 319 aa16.29■□□□□ 0.2
UPK1A-202ENST00000379013 ABCB5Q2M3G0 1257 aa16.29■□□□□ 0.2
UPK1A-202ENST00000379013 SH3D19Q5HYK7 790 aa16.29■□□□□ 0.2
UPK1A-202ENST00000379013 RUFY3Q7L099 469 aa16.29■□□□□ 0.2
UPK1A-202ENST00000379013 RASEFQ8IZ41 740 aa16.29■□□□□ 0.2
UPK1A-202ENST00000379013 ZNF333Q96JL9 665 aa16.29■□□□□ 0.2
UPK1A-202ENST00000379013 WDR18Q9BV38 432 aa16.29■□□□□ 0.2
UPK1A-202ENST00000379013 NBPF3Q9H094 633 aa16.29■□□□□ 0.2
UPK1A-202ENST00000379013 GABRQQ9UN88 632 aa16.29■□□□□ 0.2
UPK1A-202ENST00000379013 AGTPBP1Q9UPW5 1226 aa16.29■□□□□ 0.2
UPK1A-202ENST00000379013 PTPRFP10586 1907 aa16.29■□□□□ 0.2
UPK1A-202ENST00000379013 DOCK3Q8IZD9 2030 aa16.28■□□□□ 0.2
UPK1A-202ENST00000379013 MPHOSPH10O00566 681 aaKnown RBP16.28■□□□□ 0.2
UPK1A-202ENST00000379013 KDM4AO75164 1064 aa16.28■□□□□ 0.2
UPK1A-202ENST00000379013 RASA1P20936 1047 aa16.28■□□□□ 0.2
UPK1A-202ENST00000379013 STK11IPQ8N1F8 1099 aa16.28■□□□□ 0.2
UPK1A-202ENST00000379013 TMTC2Q8N394 836 aa16.28■□□□□ 0.2
UPK1A-202ENST00000379013 PARK7Q99497 189 aaKnown RBP16.28■□□□□ 0.2
UPK1A-202ENST00000379013 SH2D4AQ9H788 454 aa16.28■□□□□ 0.2
UPK1A-202ENST00000379013 ZSWIM6Q9HCJ5 1215 aa16.28■□□□□ 0.2
UPK1A-202ENST00000379013 SLC45A1Q9Y2W3 748 aa16.28■□□□□ 0.2
UPK1A-202ENST00000379013 PRDM1O75626 825 aa16.27■□□□□ 0.2
UPK1A-202ENST00000379013 GH2P01242 217 aa16.27■□□□□ 0.2
UPK1A-202ENST00000379013 RPS6KB1P23443 525 aa16.27■□□□□ 0.2
UPK1A-202ENST00000379013 GUCY1A2P33402 732 aa16.27■□□□□ 0.2
UPK1A-202ENST00000379013 TFAP4Q01664 338 aa16.27■□□□□ 0.2
UPK1A-202ENST00000379013 MB21D2Q8IYB1 491 aaPredicted RBP16.27■□□□□ 0.2
UPK1A-202ENST00000379013 SLC44A5Q8NCS7 719 aa16.27■□□□□ 0.2
UPK1A-202ENST00000379013 NEDD1Q8NHV4 660 aa16.27■□□□□ 0.2
UPK1A-202ENST00000379013 TTC14Q96N46 770 aa16.27■□□□□ 0.2
UPK1A-202ENST00000379013 KANSL2Q9H9L4 492 aa16.27■□□□□ 0.2
UPK1A-202ENST00000379013 EMILIN3Q9NT22 766 aa16.27■□□□□ 0.2
UPK1A-202ENST00000379013 TCP11L1Q9NUJ3 509 aa16.27■□□□□ 0.2
UPK1A-202ENST00000379013 SRRDQ9UH36 339 aa16.27■□□□□ 0.2
UPK1A-202ENST00000379013 ZBTB21Q9ULJ3 1066 aa16.27■□□□□ 0.2
UPK1A-202ENST00000379013 CEP290O15078 2479 aa16.26■□□□□ 0.19
UPK1A-202ENST00000379013 PRC1O43663 620 aa16.26■□□□□ 0.19
UPK1A-202ENST00000379013 FMNL1O95466 1100 aaPredicted RBP16.26■□□□□ 0.19
UPK1A-202ENST00000379013 MCM2P49736 904 aa16.26■□□□□ 0.19
UPK1A-202ENST00000379013 BACE1P56817 501 aa16.26■□□□□ 0.19
UPK1A-202ENST00000379013 PRKCZQ05513 592 aa16.26■□□□□ 0.19
UPK1A-202ENST00000379013 MTMR2Q13614 643 aa16.26■□□□□ 0.19
UPK1A-202ENST00000379013 MTFR1Q15390 333 aa16.26■□□□□ 0.19
UPK1A-202ENST00000379013 STOX1Q6ZVD7 989 aa16.26■□□□□ 0.19
UPK1A-202ENST00000379013 ANKRD13CQ8N6S4 541 aa16.26■□□□□ 0.19
UPK1A-202ENST00000379013 ACER1Q8TDN7 264 aa16.26■□□□□ 0.19
UPK1A-202ENST00000379013 CHMP4CQ96CF2 233 aa16.26■□□□□ 0.19
UPK1A-202ENST00000379013 P2RX7Q99572 595 aaKnown RBP16.26■□□□□ 0.19
UPK1A-202ENST00000379013 ASCC2Q9H1I8 757 aaPredicted RBP16.26■□□□□ 0.19
UPK1A-202ENST00000379013 AS3MTQ9HBK9 375 aa16.26■□□□□ 0.19
UPK1A-202ENST00000379013 SYNPO2Q9UMS6 1093 aa16.26■□□□□ 0.19
UPK1A-202ENST00000379013 IFIT3O14879 490 aaKnown RBP16.25■□□□□ 0.19
UPK1A-202ENST00000379013 NEK4P51957 841 aa16.25■□□□□ 0.19
UPK1A-202ENST00000379013 ADCK5Q3MIX3 580 aa16.25■□□□□ 0.19
UPK1A-202ENST00000379013 DGKHQ86XP1 1220 aa16.25■□□□□ 0.19
UPK1A-202ENST00000379013 FBXL16Q8N461 479 aa16.25■□□□□ 0.19
UPK1A-202ENST00000379013 PROCA1Q8NCQ7 364 aaPredicted RBP16.25■□□□□ 0.19
UPK1A-202ENST00000379013 ZSCAN10Q96SZ4 725 aaPredicted RBP16.25■□□□□ 0.19
UPK1A-202ENST00000379013 ARHGEF10LQ9HCE6 1279 aa16.25■□□□□ 0.19
UPK1A-202ENST00000379013 PDRG1Q9NUG6 133 aa16.25■□□□□ 0.19
UPK1A-202ENST00000379013 ZSWIM5Q9P217 1185 aa16.25■□□□□ 0.19
UPK1A-202ENST00000379013 TNKSO95271 1327 aa16.24■□□□□ 0.19
UPK1A-202ENST00000379013 TTLL1O95922 423 aa16.24■□□□□ 0.19
UPK1A-202ENST00000379013 LIFRP42702 1097 aa16.24■□□□□ 0.19
UPK1A-202ENST00000379013 KIF22Q14807 665 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms