RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 DDX20Q9UHI6 824 aaKnown RBP11.76□□□□□ -0.53
ARHGEF39-201ENST00000378387 EPHB4P54760 987 aa11.76□□□□□ -0.53
ARHGEF39-201ENST00000378387 CRYMQ14894 314 aa11.76□□□□□ -0.53
ARHGEF39-201ENST00000378387 KRT31Q15323 416 aa11.76□□□□□ -0.53
ARHGEF39-201ENST00000378387 RESP18Q5W5W9 173 aa11.76□□□□□ -0.53
ARHGEF39-201ENST00000378387 DYDC1Q8WWB3 177 aa11.76□□□□□ -0.53
ARHGEF39-201ENST00000378387 EPSTI1Q96J88 318 aa11.76□□□□□ -0.53
ARHGEF39-201ENST00000378387 ZIM3Q96PE6 472 aa11.76□□□□□ -0.53
ARHGEF39-201ENST00000378387 A6NNZ2 444 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 KCNJ18B7U540 433 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 OPLAHO14841 1288 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 CSB-PGBD3P0DP91 1061 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 AARSP49588 968 aaKnown RBP eCLIP11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 ARID5AQ03989 594 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 NR5A1Q13285 461 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 KCNJ12Q14500 433 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 TUBB8Q3ZCM7 444 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 TYW1BQ6NUM6 668 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 IFT20Q8IY31 132 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 NSMCE1Q8WV22 266 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 CCDC51Q96ER9 411 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 CSRNP2Q9H175 543 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 CEP131Q9UPN4 1083 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 PPRC1Q5VV67 1664 aaKnown RBP11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 A0A1B0GTH6 734 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 GCOM1H8Y6P7 765 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 VIMP08670 466 aaKnown RBP11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 MYZAPP0CAP1 466 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 TMOD1P28289 359 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 COPB1P53618 953 aaKnown RBP11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 TBC1D8BQ0IIM8 1120 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 SLC39A6Q13433 755 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 ZNF174Q15697 407 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 PREPLQ4J6C6 727 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 CAPRIN2Q6IMN6 1127 aaKnown RBP11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 COPS6Q7L5N1 327 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 EPN3Q9H201 632 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 INCENPQ9NQS7 918 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 G3BP2Q9UN86 482 aaKnown RBP11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 RNF113AO15541 343 aaKnown RBP11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 PPP6R2O75170 966 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 SMTNP53814 917 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 EIF4A1P60842 406 aaKnown RBP11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 SPAG1Q07617 926 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 MMRN2Q9H8L6 949 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 GGT7Q9UJ14 662 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 MCM8Q9UJA3 840 aa11.75□□□□□ -0.53
ARHGEF39-201ENST00000378387 AGPSO00116 658 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 UPP2O95045 317 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 MOCS3O95396 460 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 FGAP02671 866 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 KCNB1Q14721 858 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 GKAP1Q5VSY0 366 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 KRT26Q7Z3Y9 468 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 CCDC63Q8NA47 563 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 NELFBQ8WX92 580 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 TRIM31Q9BZY9 425 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 VPS54Q9P1Q0 977 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 LRWD1Q9UFC0 647 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 TPX2Q9ULW0 747 aaKnown RBP11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 L3MBTL1Q9Y468 752 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 TTC26A0AVF1 554 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 NCK2O43639 380 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 HEXIM1O94992 359 aaKnown RBP11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 NFRKBQ6P4R8 1299 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 XAGE3Q8WTP9 111 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 PCDHB6Q9Y5E3 794 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 ATP7BP35670 1465 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 ADGRL3Q9HAR2 1447 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 CCDC189A1A4V9 331 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 CAND2O75155 1236 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 SMIM24O75264 130 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 SNX1Q13596 522 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 MORC3Q14149 939 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 ANKS4BQ8N8V4 417 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 TSEN2Q8NCE0 465 aaKnown RBP11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 PROCA1Q8NCQ7 364 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 OR2W6PQ8NHA6 318 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 MYCBPAPQ8TBZ2 947 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 STAG1Q8WVM7 1258 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 TAF4BQ92750 862 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 SH3GL3Q99963 347 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 VCPKMTQ9H867 229 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 CEP126Q9P2H0 1117 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 ADD3Q9UEY8 706 aaKnown RBP11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 ZMYM6O95789 1325 aa11.74□□□□□ -0.53
ARHGEF39-201ENST00000378387 EDC4Q6P2E9 1401 aaKnown RBP11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 YEATS2Q9ULM3 1422 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 ERCC5P28715 1186 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 EXOSC10Q01780 885 aaKnown RBP11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 PAK1Q13153 545 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 MAEAQ7L5Y9 396 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 CACNA2D4Q7Z3S7 1137 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 KCNV2Q8TDN2 545 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 IFIH1Q9BYX4 1025 aaKnown RBP11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 PPP1R12CQ9BZL4 782 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 STIM2Q9P246 746 aa11.73□□□□□ -0.53
ARHGEF39-201ENST00000378387 NPHP4O75161 1426 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms