RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 RESTQ13127 1097 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 KCNG4Q8TDN1 519 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 CSRNP1Q96S65 589 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 LY9Q9HBG7 655 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 PRDM10Q9NQV6 1147 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 UTYO14607 1347 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 KIF23Q02241 960 aaPredicted RBP9.23□□□□□ -0.93
CKAP2-203ENST00000378037 FAM160A1Q05DH4 1040 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 STX1AQ16623 288 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 NLGN1Q8N2Q7 840 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 CEP95Q96GE4 821 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 KANSL2Q9H9L4 492 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 TMEM260Q9NX78 707 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 USP17L5A8MUK1 530 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 ARHGAP27Q6ZUM4 889 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 NOSTRINQ8IVI9 506 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 TBC1D16Q8TBP0 767 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 HPS3Q969F9 1004 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 TEKT1Q969V4 418 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 CSRNP2Q9H175 543 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 GPR108Q9NPR9 543 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 SEPT11Q9NVA2 429 aaKnown RBP9.23□□□□□ -0.93
CKAP2-203ENST00000378037 KIF13BQ9NQT8 1826 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 MED23Q9ULK4 1368 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 TOGARAM1Q9Y4F4 1720 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 SMCO2A6NFE2 343 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 DEXIO95424 95 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 SFPQP23246 707 aaKnown RBP eCLIP9.23□□□□□ -0.93
CKAP2-203ENST00000378037 HSP90AA2PQ14568 343 aaPredicted RBP9.23□□□□□ -0.93
CKAP2-203ENST00000378037 TTC38Q5R3I4 469 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 CLEC4GQ6UXB4 293 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 NSMFQ6X4W1 530 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 NELFCDQ8IXH7 590 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 KRI1Q8N9T8 703 aaKnown RBP9.23□□□□□ -0.93
CKAP2-203ENST00000378037 RTEL1Q9NZ71 1219 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 PCDHA5Q9Y5H7 936 aa9.23□□□□□ -0.93
CKAP2-203ENST00000378037 SCN11AQ9UI33 1791 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 USP17L15C9J2P7 530 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 USP17L13C9JLJ4 530 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 USP17L11C9JVI0 530 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 USP17L18D6R9N7 530 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 USP17L22D6RA61 530 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 USP17L17D6RBQ6 530 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 USP17L19D6RCP7 530 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 USP17L20D6RJB6 530 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 TOP1P11387 765 aaKnown RBP9.22□□□□□ -0.93
CKAP2-203ENST00000378037 SKILP12757 684 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 EPS15P42566 896 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 GSTO1P78417 241 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 USP17L24Q0WX57 530 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 USP17L6PQ6QN14 398 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 ZNF274Q96GC6 653 aaPredicted RBP9.22□□□□□ -0.93
CKAP2-203ENST00000378037 MRC1P22897 1456 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 TNS2Q63HR2 1409 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 WDHD1O75717 1129 aaPredicted RBP9.22□□□□□ -0.93
CKAP2-203ENST00000378037 TSR1Q2NL82 804 aaKnown RBP9.22□□□□□ -0.93
CKAP2-203ENST00000378037 EAPPQ56P03 285 aaPredicted RBP9.22□□□□□ -0.93
CKAP2-203ENST00000378037 ZNF287Q9HBT7 754 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 ZMYM6O95789 1325 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 USP42Q9H9J4 1324 aaKnown RBP9.22□□□□□ -0.93
CKAP2-203ENST00000378037 SPDYE4A6NLX3 237 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 MEIS1O00470 390 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 LETM1O95202 739 aaPredicted RBP9.22□□□□□ -0.93
CKAP2-203ENST00000378037 AKR1B1P15121 316 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 CDK8P49336 464 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 ADKP55263 362 aaKnown RBP9.22□□□□□ -0.93
CKAP2-203ENST00000378037 DLGAP5Q15398 846 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 ZFPM1Q8IX07 1006 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 LZTFL1Q9NQ48 299 aa9.22□□□□□ -0.93
CKAP2-203ENST00000378037 MYO9BQ13459 2157 aa9.21□□□□□ -0.93
CKAP2-203ENST00000378037 N4BP3O15049 544 aa9.21□□□□□ -0.93
CKAP2-203ENST00000378037 OFD1O75665 1012 aa9.21□□□□□ -0.93
CKAP2-203ENST00000378037 TPM3P06753 285 aa9.21□□□□□ -0.93
CKAP2-203ENST00000378037 SEPT2Q15019 361 aa9.21□□□□□ -0.93
CKAP2-203ENST00000378037 DLK2Q6UY11 383 aa9.21□□□□□ -0.93
CKAP2-203ENST00000378037 RDH13Q8NBN7 331 aa9.21□□□□□ -0.93
CKAP2-203ENST00000378037 RRP36Q96EU6 259 aaKnown RBP9.21□□□□□ -0.93
CKAP2-203ENST00000378037 TRIM47Q96LD4 638 aa9.21□□□□□ -0.93
CKAP2-203ENST00000378037 PSMB7Q99436 277 aa9.21□□□□□ -0.93
CKAP2-203ENST00000378037 DESI2Q9BSY9 194 aa9.21□□□□□ -0.93
CKAP2-203ENST00000378037 TCP11L1Q9NUJ3 509 aa9.21□□□□□ -0.93
CKAP2-203ENST00000378037 PYCARDQ9ULZ3 195 aa9.21□□□□□ -0.93
CKAP2-203ENST00000378037 TMEM232C9JQI7 657 aa9.21□□□□□ -0.94
CKAP2-203ENST00000378037 GH2P01242 217 aa9.21□□□□□ -0.94
CKAP2-203ENST00000378037 BAG6P46379 1132 aa9.21□□□□□ -0.94
CKAP2-203ENST00000378037 LRRC41Q15345 812 aa9.21□□□□□ -0.94
CKAP2-203ENST00000378037 EEPD1Q7L9B9 569 aa9.21□□□□□ -0.94
CKAP2-203ENST00000378037 FANCLQ9NW38 375 aa9.21□□□□□ -0.94
CKAP2-203ENST00000378037 HPS5Q9UPZ3 1129 aa9.21□□□□□ -0.94
CKAP2-203ENST00000378037 NFE2L3Q9Y4A8 694 aa9.21□□□□□ -0.94
CKAP2-203ENST00000378037 CDHR2Q9BYE9 1310 aa9.21□□□□□ -0.94
CKAP2-203ENST00000378037 RBM6P78332 1123 aaKnown RBP9.2□□□□□ -0.94
CKAP2-203ENST00000378037 EXOSC10Q01780 885 aaKnown RBP9.2□□□□□ -0.94
CKAP2-203ENST00000378037 TMTC2Q8N394 836 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 SRBD1Q8N5C6 995 aaKnown RBP9.2□□□□□ -0.94
CKAP2-203ENST00000378037 LINC00301Q8NCQ3 95 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 SYMPKQ92797 1274 aaKnown RBP9.2□□□□□ -0.94
CKAP2-203ENST00000378037 CLSTN2Q9H4D0 955 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 CTNND2Q9UQB3 1225 aa9.2□□□□□ -0.94
CKAP2-203ENST00000378037 URI1O94763 535 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms