RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ARPP21Q9UBL0 812 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-204ENST00000376643 PLXNB2O15031 1838 aa17.73■□□□□ 0.43
HDAC6-204ENST00000376643 CNMDO75829 334 aa17.73■□□□□ 0.43
HDAC6-204ENST00000376643 DPP9Q86TI2 863 aa17.73■□□□□ 0.43
HDAC6-204ENST00000376643 C7orf61Q8IZ16 206 aa17.73■□□□□ 0.43
HDAC6-204ENST00000376643 MROH8Q9H579 483 aa17.73■□□□□ 0.43
HDAC6-204ENST00000376643 KANSL2Q9H9L4 492 aa17.73■□□□□ 0.43
HDAC6-204ENST00000376643 ECHDC1Q9NTX5 307 aa17.73■□□□□ 0.43
HDAC6-204ENST00000376643 TMX2Q9Y320 296 aa17.73■□□□□ 0.43
HDAC6-204ENST00000376643 WDR46O15213 610 aaKnown RBP17.72■□□□□ 0.43
HDAC6-204ENST00000376643 BMP8BP34820 402 aa17.72■□□□□ 0.43
HDAC6-204ENST00000376643 C12orf60Q5U649 245 aa17.72■□□□□ 0.43
HDAC6-204ENST00000376643 ABRAQ8N0Z2 381 aa17.72■□□□□ 0.43
HDAC6-204ENST00000376643 SPATC1LQ9H0A9 340 aa17.72■□□□□ 0.43
HDAC6-204ENST00000376643 VCPKMTQ9H867 229 aa17.72■□□□□ 0.43
HDAC6-204ENST00000376643 ZNF287Q9HBT7 754 aa17.72■□□□□ 0.43
HDAC6-204ENST00000376643 SLC4A4Q9Y6R1 1079 aa17.72■□□□□ 0.43
HDAC6-204ENST00000376643 PEX10O60683 326 aa17.71■□□□□ 0.43
HDAC6-204ENST00000376643 FLOT1O75955 427 aa17.71■□□□□ 0.43
HDAC6-204ENST00000376643 ZFYP08048 801 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-204ENST00000376643 COPB2P35606 906 aa17.71■□□□□ 0.43
HDAC6-204ENST00000376643 OLFML2BQ68BL8 750 aa17.71■□□□□ 0.43
HDAC6-204ENST00000376643 GIMAP6Q6P9H5 292 aa17.71■□□□□ 0.43
HDAC6-204ENST00000376643 C16orf86Q6ZW13 317 aa17.71■□□□□ 0.43
HDAC6-204ENST00000376643 GOPCQ9HD26 462 aa17.71■□□□□ 0.43
HDAC6-204ENST00000376643 BTBD7Q9P203 1132 aa17.71■□□□□ 0.43
HDAC6-204ENST00000376643 A0A1W2PRG0 241 aa17.7■□□□□ 0.42
HDAC6-204ENST00000376643 USP17L12C9JPN9 530 aa17.7■□□□□ 0.42
HDAC6-204ENST00000376643 USP17L21D6R901 530 aa17.7■□□□□ 0.42
HDAC6-204ENST00000376643 SLC25A27O95847 323 aa17.7■□□□□ 0.42
HDAC6-204ENST00000376643 DSG3P32926 999 aa17.7■□□□□ 0.42
HDAC6-204ENST00000376643 CDK8P49336 464 aa17.7■□□□□ 0.42
HDAC6-204ENST00000376643 CCL14Q16627 93 aa17.7■□□□□ 0.42
HDAC6-204ENST00000376643 POTEEQ6S8J3 1075 aa17.7■□□□□ 0.42
HDAC6-204ENST00000376643 DDX20Q9UHI6 824 aaKnown RBP17.7■□□□□ 0.42
HDAC6-204ENST00000376643 CYP2D6P10635 497 aa17.69■□□□□ 0.42
HDAC6-204ENST00000376643 COL6A1P12109 1028 aa17.69■□□□□ 0.42
HDAC6-204ENST00000376643 AKR1B1P15121 316 aa17.69■□□□□ 0.42
HDAC6-204ENST00000376643 GNAT2P19087 354 aa17.69■□□□□ 0.42
HDAC6-204ENST00000376643 CNGA1P29973 690 aa17.69■□□□□ 0.42
HDAC6-204ENST00000376643 CCND3P30281 292 aaPredicted RBP17.69■□□□□ 0.42
HDAC6-204ENST00000376643 LHX8Q68G74 356 aa17.69■□□□□ 0.42
HDAC6-204ENST00000376643 SLC44A5Q8NCS7 719 aa17.69■□□□□ 0.42
HDAC6-204ENST00000376643 DYNLL2Q96FJ2 89 aa17.69■□□□□ 0.42
HDAC6-204ENST00000376643 MOV10L1Q9BXT6 1211 aaKnown RBP17.69■□□□□ 0.42
HDAC6-204ENST00000376643 ZNF236Q9UL36 1845 aa17.68■□□□□ 0.42
HDAC6-204ENST00000376643 PRKAB2O43741 272 aa17.68■□□□□ 0.42
HDAC6-204ENST00000376643 ERCC3P19447 782 aa17.68■□□□□ 0.42
HDAC6-204ENST00000376643 ADORA2AP29274 412 aa17.68■□□□□ 0.42
HDAC6-204ENST00000376643 MNX1P50219 401 aaPredicted RBP17.68■□□□□ 0.42
HDAC6-204ENST00000376643 PLS1Q14651 629 aa17.68■□□□□ 0.42
HDAC6-204ENST00000376643 GPR153Q6NV75 609 aa17.68■□□□□ 0.42
HDAC6-204ENST00000376643 KBTBD3Q8NAB2 608 aa17.68■□□□□ 0.42
HDAC6-204ENST00000376643 ARRDC4Q8NCT1 418 aa17.68■□□□□ 0.42
HDAC6-204ENST00000376643 GDF15Q99988 308 aa17.68■□□□□ 0.42
HDAC6-204ENST00000376643 STAP2Q9UGK3 403 aa17.68■□□□□ 0.42
HDAC6-204ENST00000376643 DNM1LO00429 736 aa17.67■□□□□ 0.42
HDAC6-204ENST00000376643 ERC2O15083 957 aa17.67■□□□□ 0.42
HDAC6-204ENST00000376643 FCER1AP12319 257 aa17.67■□□□□ 0.42
HDAC6-204ENST00000376643 SBK1Q52WX2 424 aa17.67■□□□□ 0.42
HDAC6-204ENST00000376643 NCAPG2Q86XI2 1143 aa17.67■□□□□ 0.42
HDAC6-204ENST00000376643 APPBP2Q92624 585 aa17.67■□□□□ 0.42
HDAC6-204ENST00000376643 NRBP1Q9UHY1 535 aa17.67■□□□□ 0.42
HDAC6-204ENST00000376643 PFASO15067 1338 aa17.67■□□□□ 0.42
HDAC6-204ENST00000376643 MYH8P13535 1937 aa17.66■□□□□ 0.42
HDAC6-204ENST00000376643 CTR9Q6PD62 1173 aa17.66■□□□□ 0.42
HDAC6-204ENST00000376643 SPICE1Q8N0Z3 855 aa17.66■□□□□ 0.42
HDAC6-204ENST00000376643 DCTPP1Q9H773 170 aa17.66■□□□□ 0.42
HDAC6-204ENST00000376643 MKNK2Q9HBH9 465 aa17.66■□□□□ 0.42
HDAC6-204ENST00000376643 ZMYND8Q9ULU4 1186 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-204ENST00000376643 MYH7P12883 1935 aa17.65■□□□□ 0.42
HDAC6-204ENST00000376643 KBTBD13C9JR72 458 aa17.65■□□□□ 0.42
HDAC6-204ENST00000376643 CYBAP13498 195 aa17.65■□□□□ 0.42
HDAC6-204ENST00000376643 EEF2P13639 858 aaKnown RBP17.65■□□□□ 0.42
HDAC6-204ENST00000376643 NPLOC4Q8TAT6 608 aa17.65■□□□□ 0.42
HDAC6-204ENST00000376643 ATG4CQ96DT6 458 aa17.65■□□□□ 0.42
HDAC6-204ENST00000376643 STRBPQ96SI9 672 aaKnown RBP17.65■□□□□ 0.42
HDAC6-204ENST00000376643 NACAP1Q9BZK3 213 aa17.65■□□□□ 0.42
HDAC6-204ENST00000376643 PUS7LQ9H0K6 701 aaKnown RBP17.65■□□□□ 0.42
HDAC6-204ENST00000376643 FLRT1Q9NZU1 646 aa17.65■□□□□ 0.42
HDAC6-204ENST00000376643 ZBTB47Q9UFB7 747 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-204ENST00000376643 PRKAG2Q9UGJ0 569 aa17.65■□□□□ 0.42
HDAC6-204ENST00000376643 SYNPO2Q9UMS6 1093 aa17.65■□□□□ 0.42
HDAC6-204ENST00000376643 TTC41PQ6P2S7 1318 aa17.65■□□□□ 0.42
HDAC6-204ENST00000376643 A0A0G2JMZ2 1700 aa17.64■□□□□ 0.41
HDAC6-204ENST00000376643 RNF113AO15541 343 aaKnown RBP17.64■□□□□ 0.41
HDAC6-204ENST00000376643 SEPT4O43236 478 aa17.64■□□□□ 0.41
HDAC6-204ENST00000376643 SLC3A2P08195 630 aaKnown RBP17.64■□□□□ 0.41
HDAC6-204ENST00000376643 CYP2C19P33261 490 aa17.64■□□□□ 0.41
HDAC6-204ENST00000376643 EVX2Q03828 476 aa17.64■□□□□ 0.41
HDAC6-204ENST00000376643 KCTD2Q14681 263 aa17.64■□□□□ 0.41
HDAC6-204ENST00000376643 PPP4R3BQ5MIZ7 849 aa17.64■□□□□ 0.41
HDAC6-204ENST00000376643 TDHQ8IZJ6 230 aa17.64■□□□□ 0.41
HDAC6-204ENST00000376643 LBHD1Q9BQE6 289 aaPredicted RBP17.64■□□□□ 0.41
HDAC6-204ENST00000376643 UBE2OQ9C0C9 1292 aaKnown RBP17.64■□□□□ 0.41
HDAC6-204ENST00000376643 DIS3Q9Y2L1 958 aaKnown RBP17.64■□□□□ 0.41
HDAC6-204ENST00000376643 ROBO3Q96MS0 1386 aa17.64■□□□□ 0.41
HDAC6-204ENST00000376643 RAD21O60216 631 aa17.63■□□□□ 0.41
HDAC6-204ENST00000376643 SMARCA5O60264 1052 aaPredicted RBP17.63■□□□□ 0.41
HDAC6-204ENST00000376643 MAGEA10P43363 369 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms