RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 SLC39A14Q15043 492 aa20.39■□□□□ 0.86
CTTN-203ENST00000376561 PFKFB3Q16875 520 aaPredicted RBP20.39■□□□□ 0.86
CTTN-203ENST00000376561 ADALQ6DHV7 355 aa20.39■□□□□ 0.86
CTTN-203ENST00000376561 KLHL34Q8N239 644 aa20.39■□□□□ 0.86
CTTN-203ENST00000376561 OXER1Q8TDS5 423 aa20.39■□□□□ 0.86
CTTN-203ENST00000376561 TSPY26PQ9H489 355 aa20.39■□□□□ 0.86
CTTN-203ENST00000376561 PI4KBQ9UBF8 816 aa20.39■□□□□ 0.86
CTTN-203ENST00000376561 SH3BP5LQ7L8J4 393 aa20.39■□□□□ 0.85
CTTN-203ENST00000376561 DNAJC18Q9H819 358 aa20.39■□□□□ 0.85
CTTN-203ENST00000376561 ZSCAN29Q8IWY8 852 aaPredicted RBP20.38■□□□□ 0.85
CTTN-203ENST00000376561 PIBF1Q8WXW3 757 aa20.38■□□□□ 0.85
CTTN-203ENST00000376561 TAOK3Q9H2K8 898 aa20.38■□□□□ 0.85
CTTN-203ENST00000376561 ZBTB12Q9Y330 459 aaPredicted RBP20.38■□□□□ 0.85
CTTN-203ENST00000376561 CD2APQ9Y5K6 639 aa20.38■□□□□ 0.85
CTTN-203ENST00000376561 GREB1LQ9C091 1923 aaPredicted RBP20.38■□□□□ 0.85
CTTN-203ENST00000376561 SLURP2P0DP57 97 aa20.38■□□□□ 0.85
CTTN-203ENST00000376561 KRT2P35908 639 aa20.38■□□□□ 0.85
CTTN-203ENST00000376561 PTPAQ15257 358 aa20.38■□□□□ 0.85
CTTN-203ENST00000376561 UPF1Q92900 1129 aaKnown RBP eCLIP20.38■□□□□ 0.85
CTTN-203ENST00000376561 LZTS2Q9BRK4 669 aa20.38■□□□□ 0.85
CTTN-203ENST00000376561 GOLPH3LQ9H4A5 285 aa20.38■□□□□ 0.85
CTTN-203ENST00000376561 HDAC9Q9UKV0 1011 aa20.38■□□□□ 0.85
CTTN-203ENST00000376561 A0A1W2PQ27 194 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 A0A1W2PQ64 194 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 A0A1W2PQD8 194 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 SPDYE2BA6NHP3 402 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 ENTPD3O75355 529 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 SPDYE6P0CI01 402 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 SLC35G1Q2M3R5 365 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 RILPL1Q5EBL4 403 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 RASGRP2Q7LDG7 609 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 OGFOD1Q8N543 542 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 CLSTN2Q9H4D0 955 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 CYTH3O43739 400 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 PARP1P09874 1014 aaKnown RBP20.37■□□□□ 0.85
CTTN-203ENST00000376561 GOLGA8HP0CJ92 632 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 VEGFAP15692 232 aaPredicted RBP20.37■□□□□ 0.85
CTTN-203ENST00000376561 TOB1P50616 345 aaPredicted RBP20.37■□□□□ 0.85
CTTN-203ENST00000376561 CAMK4Q16566 473 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 CCDC73Q6ZRK6 1079 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 CCDC17Q96LX7 622 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 TNMDQ9H2S6 317 aa20.37■□□□□ 0.85
CTTN-203ENST00000376561 ATRNL1Q5VV63 1379 aa20.36■□□□□ 0.85
CTTN-203ENST00000376561 KLRF2D3W0D1 207 aa20.36■□□□□ 0.85
CTTN-203ENST00000376561 TTLL1O95922 423 aa20.36■□□□□ 0.85
CTTN-203ENST00000376561 NPY5RQ15761 445 aa20.36■□□□□ 0.85
CTTN-203ENST00000376561 FSIP1Q8NA03 581 aa20.36■□□□□ 0.85
CTTN-203ENST00000376561 PSDA5PKW4 1024 aaPredicted RBP20.35■□□□□ 0.85
CTTN-203ENST00000376561 PPP6R2O75170 966 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 EIF6P56537 245 aaKnown RBP20.35■□□□□ 0.85
CTTN-203ENST00000376561 CXCL9Q07325 125 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 SNW1Q13573 536 aaKnown RBP20.35■□□□□ 0.85
CTTN-203ENST00000376561 MAP3K11Q16584 847 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 USP17L2Q6R6M4 530 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 CLEC10AQ8IUN9 316 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 FOXP4Q8IVH2 680 aaPredicted RBP20.35■□□□□ 0.85
CTTN-203ENST00000376561 AGBL3Q8NEM8 1001 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 ENGASEQ8NFI3 743 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 MRPS27Q92552 414 aaKnown RBP20.35■□□□□ 0.85
CTTN-203ENST00000376561 FUCA2Q9BTY2 467 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 BRMS1Q9HCU9 246 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 FAM196BA6NMK8 535 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 NFKBIEO00221 500 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 MPHOSPH10O00566 681 aaKnown RBP20.35■□□□□ 0.85
CTTN-203ENST00000376561 MARCKSP29966 332 aaPredicted RBP20.35■□□□□ 0.85
CTTN-203ENST00000376561 PTGER2P43116 358 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 DLGAP5Q15398 846 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 AXDND1Q5T1B0 1012 aaPredicted RBP20.35■□□□□ 0.85
CTTN-203ENST00000376561 SPZ1Q9BXG8 430 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 CABP5Q9NP86 173 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.35■□□□□ 0.85
CTTN-203ENST00000376561 CLIP2Q9UDT6 1046 aa20.35■□□□□ 0.85
CTTN-203ENST00000376561 COL2A1P02458 1487 aaPredicted RBP20.35■□□□□ 0.85
CTTN-203ENST00000376561 PDHBP11177 359 aa20.34■□□□□ 0.85
CTTN-203ENST00000376561 FAM160A1Q05DH4 1040 aa20.34■□□□□ 0.85
CTTN-203ENST00000376561 LRRC47Q8N1G4 583 aaKnown RBP20.34■□□□□ 0.85
CTTN-203ENST00000376561 JMYQ8N9B5 988 aa20.34■□□□□ 0.85
CTTN-203ENST00000376561 TMOD2Q9NZR1 351 aa20.34■□□□□ 0.85
CTTN-203ENST00000376561 BCS1LQ9Y276 419 aa20.34■□□□□ 0.85
CTTN-203ENST00000376561 NLRP5P59047 1200 aa20.34■□□□□ 0.85
CTTN-203ENST00000376561 TATDN1Q6P1N9 297 aa20.34■□□□□ 0.85
CTTN-203ENST00000376561 RBM43Q6ZSC3 357 aaKnown RBP20.34■□□□□ 0.85
CTTN-203ENST00000376561 METTL16Q86W50 562 aaKnown RBP20.34■□□□□ 0.85
CTTN-203ENST00000376561 JDP2Q8WYK2 163 aa20.34■□□□□ 0.85
CTTN-203ENST00000376561 TRIM34Q9BYJ4 488 aa20.34■□□□□ 0.85
CTTN-203ENST00000376561 SH3GLB2Q9NR46 395 aa20.34■□□□□ 0.85
CTTN-203ENST00000376561 USP17L5A8MUK1 530 aa20.33■□□□□ 0.85
CTTN-203ENST00000376561 SMARCA1P28370 1054 aa20.33■□□□□ 0.85
CTTN-203ENST00000376561 CERKLQ49MI3 558 aaPredicted RBP20.33■□□□□ 0.85
CTTN-203ENST00000376561 TNFRSF25Q93038 417 aa20.33■□□□□ 0.85
CTTN-203ENST00000376561 MYH4Q9Y623 1939 aa20.33■□□□□ 0.84
CTTN-203ENST00000376561 A0A1B0GVL5 298 aa20.33■□□□□ 0.84
CTTN-203ENST00000376561 EARS2Q5JPH6 523 aaKnown RBP20.33■□□□□ 0.84
CTTN-203ENST00000376561 RNF214Q8ND24 703 aa20.33■□□□□ 0.84
CTTN-203ENST00000376561 GPKOWQ92917 476 aaPredicted RBP eCLIP20.33■□□□□ 0.842e-6■□□□□ 10.3
CTTN-203ENST00000376561 CPVLQ9H3G5 476 aa20.33■□□□□ 0.84
CTTN-203ENST00000376561 CLRN2A0PK11 232 aa20.32■□□□□ 0.84
CTTN-203ENST00000376561 SNHG28P0DPA3 235 aa20.32■□□□□ 0.84
CTTN-203ENST00000376561 PPP4R3BQ5MIZ7 849 aa20.32■□□□□ 0.84
CTTN-203ENST00000376561 CIAPIN1Q6FI81 312 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms