RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 JAKMIP2Q96AA8 810 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 HOOK2Q96ED9 719 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 BCORL1Q5H9F3 1711 aa15.19■□□□□ 0.02
C9orf47-203ENST00000375851 TECP42680 631 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 DYNLL1P63167 89 aaKnown RBP15.18■□□□□ 0.02
C9orf47-203ENST00000375851 PTGDRQ13258 359 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 NECTIN1Q15223 517 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 TRPC5Q9UL62 973 aaPredicted RBP15.18■□□□□ 0.02
C9orf47-203ENST00000375851 PRKAB2O43741 272 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 EXOC3O60645 756 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 CERKLQ49MI3 558 aaPredicted RBP15.18■□□□□ 0.02
C9orf47-203ENST00000375851 NEK8Q86SG6 692 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 GPIHBP1Q8IV16 184 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.18■□□□□ 0.02
C9orf47-203ENST00000375851 PCDHA12Q9UN75 941 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 ATP2A1O14983 1001 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 GCNT3O95395 438 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 KRT5P13647 590 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 SLC39A14Q15043 492 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 TMEM87AQ8NBN3 555 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 ATRIPQ8WXE1 791 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 SLF1Q9BQI6 1058 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 A0A1W2PQ27 194 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 A0A1W2PQ64 194 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 A0A1W2PQD8 194 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 ASIC2Q16515 512 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 MRPL44Q9H9J2 332 aaKnown RBP15.18■□□□□ 0.02
C9orf47-203ENST00000375851 MTUS1Q9ULD2 1270 aa15.18■□□□□ 0.02
C9orf47-203ENST00000375851 RBM6P78332 1123 aaKnown RBP15.17■□□□□ 0.02
C9orf47-203ENST00000375851 MSANTD4Q8NCY6 345 aa15.17■□□□□ 0.02
C9orf47-203ENST00000375851 QTRT2Q9H974 415 aaKnown RBP15.17■□□□□ 0.02
C9orf47-203ENST00000375851 EXOC7Q9UPT5 735 aa15.17■□□□□ 0.02
C9orf47-203ENST00000375851 SERPINB2P05120 415 aa15.17■□□□□ 0.02
C9orf47-203ENST00000375851 OR52Z1P0C646 297 aa15.17■□□□□ 0.02
C9orf47-203ENST00000375851 BAG6P46379 1132 aa15.17■□□□□ 0.02
C9orf47-203ENST00000375851 LONRF3Q496Y0 759 aa15.17■□□□□ 0.02
C9orf47-203ENST00000375851 GALNT17Q6IS24 598 aa15.17■□□□□ 0.02
C9orf47-203ENST00000375851 RNF26Q9BY78 433 aaPredicted RBP15.17■□□□□ 0.02
C9orf47-203ENST00000375851 CARMIL3Q8ND23 1372 aa15.17■□□□□ 0.02
C9orf47-203ENST00000375851 ADKP55263 362 aaKnown RBP15.17■□□□□ 0.02
C9orf47-203ENST00000375851 TPH2Q8IWU9 490 aa15.17■□□□□ 0.02
C9orf47-203ENST00000375851 CNKSR1Q969H4 720 aa15.17■□□□□ 0.02
C9orf47-203ENST00000375851 FAM207AQ9NSI2 230 aaPredicted RBP15.17■□□□□ 0.02
C9orf47-203ENST00000375851 TLDC2A0PJX2 215 aa15.17■□□□□ 0.02
C9orf47-203ENST00000375851 LCORLQ8N3X6 602 aa15.17■□□□□ 0.02
C9orf47-203ENST00000375851 PKNOX2Q96KN3 472 aa15.17■□□□□ 0.02
C9orf47-203ENST00000375851 ICA1Q05084 483 aa15.16■□□□□ 0.02
C9orf47-203ENST00000375851 SUSD4Q5VX71 490 aa15.16■□□□□ 0.02
C9orf47-203ENST00000375851 TRIML1Q8N9V2 468 aa15.16■□□□□ 0.02
C9orf47-203ENST00000375851 KIFAP3Q92845 792 aa15.16■□□□□ 0.02
C9orf47-203ENST00000375851 SPOPO43791 374 aa15.16■□□□□ 0.02
C9orf47-203ENST00000375851 GAS7O60861 476 aa15.16■□□□□ 0.02
C9orf47-203ENST00000375851 LARGE1O95461 756 aa15.16■□□□□ 0.02
C9orf47-203ENST00000375851 FANCLQ9NW38 375 aa15.16■□□□□ 0.02
C9orf47-203ENST00000375851 ZHX1Q9UKY1 873 aaPredicted RBP15.16■□□□□ 0.02
C9orf47-203ENST00000375851 PCDHA5Q9Y5H7 936 aa15.16■□□□□ 0.02
C9orf47-203ENST00000375851 UNC13BO14795 1591 aa15.16■□□□□ 0.02
C9orf47-203ENST00000375851 CAPN2P17655 700 aa15.16■□□□□ 0.02
C9orf47-203ENST00000375851 U2AF2P26368 475 aaKnown RBP eCLIP15.16■□□□□ 0.02
C9orf47-203ENST00000375851 TUBB2AQ13885 445 aa15.16■□□□□ 0.02
C9orf47-203ENST00000375851 SECISBP2LQ93073 1101 aaKnown RBP15.16■□□□□ 0.02
C9orf47-203ENST00000375851 TUBB2BQ9BVA1 445 aa15.16■□□□□ 0.02
C9orf47-203ENST00000375851 ALKQ9UM73 1620 aa15.16■□□□□ 0.02
C9orf47-203ENST00000375851 ATP10DQ9P241 1426 aa15.16■□□□□ 0.02
C9orf47-203ENST00000375851 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.15■□□□□ 0.02
C9orf47-203ENST00000375851 RNASE9P60153 205 aaKnown RBP15.15■□□□□ 0.02
C9orf47-203ENST00000375851 PRR16Q569H4 304 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 CFAP58Q5T655 872 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 NOX5Q96PH1 765 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 NLRC4Q9NPP4 1024 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 MTRF1LQ9UGC7 380 aaKnown RBP15.15■□□□□ 0.02
C9orf47-203ENST00000375851 KLHL30Q0D2K2 578 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 STRN3Q13033 797 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 CALCOCO2Q13137 446 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 RASGRF1Q13972 1273 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 HLFQ16534 295 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 GLI2P10070 1586 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 PNPLA6Q8IY17 1366 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 NOP56O00567 594 aaKnown RBP15.15■□□□□ 0.02
C9orf47-203ENST00000375851 BBOX1O75936 387 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 TNFAIP1Q13829 316 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 SLFN13Q68D06 897 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 CCDC25Q86WR0 208 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 PPP1R14CQ8TAE6 165 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 VPS18Q9P253 973 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 NCAPD2Q15021 1401 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 LRMPQ12912 555 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 PPP1R7Q15435 360 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 FOXP1Q9H334 677 aaPredicted RBP15.15■□□□□ 0.02
C9orf47-203ENST00000375851 ZSWIM5Q9P217 1185 aa15.15■□□□□ 0.02
C9orf47-203ENST00000375851 KDM3AQ9Y4C1 1321 aa15.14■□□□□ 0.01
C9orf47-203ENST00000375851 TCP10L2B9ZVM9 353 aa15.14■□□□□ 0.01
C9orf47-203ENST00000375851 TRIM37O94972 964 aa15.14■□□□□ 0.01
C9orf47-203ENST00000375851 HDXQ7Z353 690 aa15.14■□□□□ 0.01
C9orf47-203ENST00000375851 IQCGQ9H095 443 aaKnown RBP15.14■□□□□ 0.01
C9orf47-203ENST00000375851 ZNF408Q9H9D4 720 aa15.14■□□□□ 0.01
C9orf47-203ENST00000375851 POLR3EQ9NVU0 708 aa15.14■□□□□ 0.01
C9orf47-203ENST00000375851 GTPBP6O43824 516 aaPredicted RBP15.14■□□□□ 0.01
C9orf47-203ENST00000375851 SEL1L2Q5TEA6 688 aa15.14■□□□□ 0.01
C9orf47-203ENST00000375851 GPBP1Q86WP2 473 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms