RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 PTPRFP10586 1907 aa20.63■□□□□ 0.89
C6orf48-207ENST00000375642 VCAM1P19320 739 aa20.63■□□□□ 0.89
C6orf48-207ENST00000375642 SP3Q02447 781 aa20.63■□□□□ 0.89
C6orf48-207ENST00000375642 PPP4R3BQ5MIZ7 849 aa20.63■□□□□ 0.89
C6orf48-207ENST00000375642 LPAR1Q92633 364 aa20.63■□□□□ 0.89
C6orf48-207ENST00000375642 VCPKMTQ9H867 229 aa20.63■□□□□ 0.89
C6orf48-207ENST00000375642 GOPCQ9HD26 462 aa20.63■□□□□ 0.89
C6orf48-207ENST00000375642 ANO2Q9NQ90 1003 aa20.63■□□□□ 0.89
C6orf48-207ENST00000375642 CPA4Q9UI42 421 aa20.63■□□□□ 0.89
C6orf48-207ENST00000375642 USP17L15C9J2P7 530 aa20.62■□□□□ 0.89
C6orf48-207ENST00000375642 USP17L13C9JLJ4 530 aa20.62■□□□□ 0.89
C6orf48-207ENST00000375642 USP17L11C9JVI0 530 aa20.62■□□□□ 0.89
C6orf48-207ENST00000375642 USP17L18D6R9N7 530 aa20.62■□□□□ 0.89
C6orf48-207ENST00000375642 USP17L22D6RA61 530 aa20.62■□□□□ 0.89
C6orf48-207ENST00000375642 USP17L17D6RBQ6 530 aa20.62■□□□□ 0.89
C6orf48-207ENST00000375642 USP17L19D6RCP7 530 aa20.62■□□□□ 0.89
C6orf48-207ENST00000375642 USP17L20D6RJB6 530 aa20.62■□□□□ 0.89
C6orf48-207ENST00000375642 TTLL1O95922 423 aa20.62■□□□□ 0.89
C6orf48-207ENST00000375642 NT5C2P49902 561 aa20.62■□□□□ 0.89
C6orf48-207ENST00000375642 USP17L24Q0WX57 530 aa20.62■□□□□ 0.89
C6orf48-207ENST00000375642 C17orf99Q6UX52 265 aa20.62■□□□□ 0.89
C6orf48-207ENST00000375642 ESR2Q92731 530 aa20.62■□□□□ 0.89
C6orf48-207ENST00000375642 LSG1Q9H089 658 aaKnown RBP20.62■□□□□ 0.89
C6orf48-207ENST00000375642 ADGRA2Q96PE1 1338 aa20.61■□□□□ 0.89
C6orf48-207ENST00000375642 RAD21O60216 631 aa20.61■□□□□ 0.89
C6orf48-207ENST00000375642 SPICE1Q8N0Z3 855 aa20.61■□□□□ 0.89
C6orf48-207ENST00000375642 MKL1Q969V6 931 aa20.61■□□□□ 0.89
C6orf48-207ENST00000375642 RPAP3Q9H6T3 665 aaPredicted RBP20.61■□□□□ 0.89
C6orf48-207ENST00000375642 RBM8AQ9Y5S9 174 aaKnown RBP20.61■□□□□ 0.89
C6orf48-207ENST00000375642 NEDD4P46934 1319 aa20.6■□□□□ 0.89
C6orf48-207ENST00000375642 LOC285556D6RIA3 1793 aa20.6■□□□□ 0.89
C6orf48-207ENST00000375642 NMT2O60551 498 aa20.6■□□□□ 0.89
C6orf48-207ENST00000375642 KIAA1755Q5JYT7 1200 aa20.6■□□□□ 0.89
C6orf48-207ENST00000375642 FBXO46Q6PJ61 603 aaPredicted RBP20.6■□□□□ 0.89
C6orf48-207ENST00000375642 CATSPERGQ6ZRH7 1159 aa20.6■□□□□ 0.89
C6orf48-207ENST00000375642 ERO1AQ96HE7 468 aa20.6■□□□□ 0.89
C6orf48-207ENST00000375642 P2RX7Q99572 595 aaKnown RBP20.6■□□□□ 0.89
C6orf48-207ENST00000375642 CNNM2Q9H8M5 875 aa20.6■□□□□ 0.89
C6orf48-207ENST00000375642 IL17RBQ9NRM6 502 aa20.6■□□□□ 0.89
C6orf48-207ENST00000375642 SYNPO2Q9UMS6 1093 aa20.6■□□□□ 0.89
C6orf48-207ENST00000375642 STX8Q9UNK0 236 aa20.6■□□□□ 0.89
C6orf48-207ENST00000375642 CYP21A2P08686 494 aa20.59■□□□□ 0.89
C6orf48-207ENST00000375642 GCLCP48506 637 aaPredicted RBP20.59■□□□□ 0.89
C6orf48-207ENST00000375642 KRT23Q9C075 422 aa20.59■□□□□ 0.89
C6orf48-207ENST00000375642 TANGO6Q9C0B7 1094 aa20.59■□□□□ 0.89
C6orf48-207ENST00000375642 TCP11L1Q9NUJ3 509 aa20.59■□□□□ 0.89
C6orf48-207ENST00000375642 F5H6K3 240 aa20.58■□□□□ 0.89
C6orf48-207ENST00000375642 KDM4AO75164 1064 aa20.58■□□□□ 0.89
C6orf48-207ENST00000375642 BCRP11274 1271 aa20.58■□□□□ 0.89
C6orf48-207ENST00000375642 HERVK_113P62684 666 aa20.58■□□□□ 0.89
C6orf48-207ENST00000375642 KLRC3Q07444 240 aa20.58■□□□□ 0.89
C6orf48-207ENST00000375642 TRDNQ13061 729 aa20.58■□□□□ 0.89
C6orf48-207ENST00000375642 LRRC47Q8N1G4 583 aaKnown RBP20.58■□□□□ 0.89
C6orf48-207ENST00000375642 GREB1LQ9C091 1923 aaPredicted RBP20.58■□□□□ 0.88
C6orf48-207ENST00000375642 B4E1Z4 1266 aa20.57■□□□□ 0.88
C6orf48-207ENST00000375642 WDR46O15213 610 aaKnown RBP20.57■□□□□ 0.88
C6orf48-207ENST00000375642 NDUFB10O96000 172 aa20.57■□□□□ 0.88
C6orf48-207ENST00000375642 KIF22Q14807 665 aa20.57■□□□□ 0.88
C6orf48-207ENST00000375642 ARHGEF6Q15052 776 aa20.57■□□□□ 0.88
C6orf48-207ENST00000375642 ANKRD13CQ8N6S4 541 aa20.57■□□□□ 0.88
C6orf48-207ENST00000375642 NKX2-3Q8TAU0 364 aa20.57■□□□□ 0.88
C6orf48-207ENST00000375642 CD99L2Q8TCZ2 262 aa20.57■□□□□ 0.88
C6orf48-207ENST00000375642 GTF3C2Q8WUA4 911 aaPredicted RBP20.57■□□□□ 0.88
C6orf48-207ENST00000375642 NOVP48745 357 aa20.56■□□□□ 0.88
C6orf48-207ENST00000375642 LACTBP83111 547 aaPredicted RBP20.56■□□□□ 0.88
C6orf48-207ENST00000375642 COG2Q14746 738 aa20.56■□□□□ 0.88
C6orf48-207ENST00000375642 IQCA1Q86XH1 822 aa20.56■□□□□ 0.88
C6orf48-207ENST00000375642 GMCL1P1Q8NEA9 526 aa20.56■□□□□ 0.88
C6orf48-207ENST00000375642 HOXC10Q9NYD6 342 aa20.56■□□□□ 0.88
C6orf48-207ENST00000375642 ZSWIM5Q9P217 1185 aa20.56■□□□□ 0.88
C6orf48-207ENST00000375642 E7EWF7 191 aa20.55■□□□□ 0.88
C6orf48-207ENST00000375642 FLOT1O75955 427 aa20.55■□□□□ 0.88
C6orf48-207ENST00000375642 FAM110CQ1W6H9 321 aa20.55■□□□□ 0.88
C6orf48-207ENST00000375642 CCDC178Q5BJE1 867 aa20.55■□□□□ 0.88
C6orf48-207ENST00000375642 FAM83BQ5T0W9 1011 aa20.55■□□□□ 0.88
C6orf48-207ENST00000375642 SLFN13Q68D06 897 aa20.55■□□□□ 0.88
C6orf48-207ENST00000375642 TTC14Q96N46 770 aa20.55■□□□□ 0.88
C6orf48-207ENST00000375642 SLC27A2O14975 620 aa20.54■□□□□ 0.88
C6orf48-207ENST00000375642 TOP1P11387 765 aaKnown RBP20.54■□□□□ 0.88
C6orf48-207ENST00000375642 NECTIN1Q15223 517 aa20.54■□□□□ 0.88
C6orf48-207ENST00000375642 RNF20Q5VTR2 975 aa20.54■□□□□ 0.88
C6orf48-207ENST00000375642 CREB3L3Q68CJ9 461 aa20.54■□□□□ 0.88
C6orf48-207ENST00000375642 RALYLQ86SE5 291 aaKnown RBP20.54■□□□□ 0.88
C6orf48-207ENST00000375642 GPRC5AQ8NFJ5 357 aa20.54■□□□□ 0.88
C6orf48-207ENST00000375642 NUP88Q99567 741 aaPredicted RBP20.54■□□□□ 0.88
C6orf48-207ENST00000375642 TMEM47Q9BQJ4 181 aa20.54■□□□□ 0.88
C6orf48-207ENST00000375642 ZKSCAN3Q9BRR0 538 aa20.54■□□□□ 0.88
C6orf48-207ENST00000375642 EFCC1Q9HA90 598 aa20.54■□□□□ 0.88
C6orf48-207ENST00000375642 TAF6LQ9Y6J9 622 aa20.54■□□□□ 0.88
C6orf48-207ENST00000375642 LAMA4Q16363 1823 aa20.54■□□□□ 0.88
C6orf48-207ENST00000375642 ECM2O94769 699 aaPredicted RBP20.53■□□□□ 0.88
C6orf48-207ENST00000375642 REC8O95072 547 aa20.53■□□□□ 0.88
C6orf48-207ENST00000375642 HABP4Q5JVS0 413 aaKnown RBP20.53■□□□□ 0.88
C6orf48-207ENST00000375642 DGKHQ86XP1 1220 aa20.53■□□□□ 0.88
C6orf48-207ENST00000375642 NCOA7Q8NI08 942 aa20.53■□□□□ 0.88
C6orf48-207ENST00000375642 ZSCAN10Q96SZ4 725 aaPredicted RBP20.53■□□□□ 0.88
C6orf48-207ENST00000375642 UBAC1Q9BSL1 405 aa20.53■□□□□ 0.88
C6orf48-207ENST00000375642 PAGR1Q9BTK6 254 aa20.53■□□□□ 0.88
C6orf48-207ENST00000375642 RBPJLQ9UBG7 517 aa20.53■□□□□ 0.88
C6orf48-207ENST00000375642 MORF4L1Q9UBU8 362 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms