RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 RAPH1Q70E73 1250 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 NAPBQ9H115 298 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 TMA7Q9Y2S6 64 aaKnown RBP6.54□□□□□ -1.36
SCN2A-202ENST00000375427 AXIN2Q9Y2T1 843 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 BTN3A3O00478 584 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 PLS3P13797 630 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 IFNA8P32881 189 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 PSME3P61289 254 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 ATP6V0A2Q9Y487 856 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 ICE1Q9Y2F5 2266 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 CBFA2T3O75081 653 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 ANKS6Q68DC2 871 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 CC2D1AQ6P1N0 951 aaPredicted RBP6.54□□□□□ -1.36
SCN2A-202ENST00000375427 GIT1Q9Y2X7 761 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 KCNA1Q09470 495 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 WASHC4Q2M389 1173 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 S100PBPQ96BU1 408 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 B3GALT6Q96L58 329 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 LRRC37BQ96QE4 947 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 ZWILCHQ9H900 591 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 TUBA8Q9NY65 449 aaPredicted RBP6.54□□□□□ -1.36
SCN2A-202ENST00000375427 WARS2Q9UGM6 360 aaKnown RBP6.54□□□□□ -1.36
SCN2A-202ENST00000375427 PACSIN2Q9UNF0 486 aaPredicted RBP6.54□□□□□ -1.36
SCN2A-202ENST00000375427 KLHL20Q9Y2M5 609 aa6.54□□□□□ -1.36
SCN2A-202ENST00000375427 EIF3BP55884 814 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 PDAP1Q13442 181 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 CDC37Q16543 378 aaPredicted RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 TINF2Q9BSI4 451 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 ING2Q9H160 280 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 MORC2Q9Y6X9 1032 aaPredicted RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SYCE3A1L190 88 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SMCO2A6NFE2 343 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 TUBGCP2Q9BSJ2 902 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 TRIM15Q9C019 465 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 GID8Q9NWU2 228 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 AKR1D1P51857 326 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 CAPRIN1Q14444 709 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 TXNDC11Q6PKC3 985 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 HDGFL2Q7Z4V5 671 aaPredicted RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 LSM14AQ8ND56 463 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 TNIP2Q8NFZ5 429 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 CDC5LQ99459 802 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SUCLA2Q9P2R7 463 aaPredicted RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SLC13A4Q9UKG4 626 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 STX6O43752 255 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 CDC45O75419 566 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SMNDC1O75940 238 aaKnown RBP eCLIP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 BRD1O95696 1058 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 PSMC3P17980 439 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 ITGAXP20702 1163 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 MED21Q13503 144 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 ZSCAN26Q16670 478 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 MTERF3Q96E29 417 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 CARD10Q9BWT7 1032 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 IFIH1Q9BYX4 1025 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 A0A1W2PRG6 482 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 RGS10O43665 173 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 MFN2O95140 757 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SNX4O95219 450 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SPIRE1Q08AE8 756 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 BIRC3Q13489 604 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SESTD1Q86VW0 696 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 OSCP1Q8WVF1 389 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 MTA3Q9BTC8 594 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 DDHD2O94830 711 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 PSMC6P62333 389 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 UBE3AQ05086 875 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 RNASELQ05823 741 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 CCDC142Q17RM4 750 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 NOP9Q86U38 636 aaKnown RBP6.53□□□□□ -1.36
SCN2A-202ENST00000375427 FAM210AQ96ND0 272 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 OSBPL10Q9BXB5 764 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 C8orf4Q9NR00 106 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 STRIP2Q9ULQ0 834 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SNX5Q9Y5X3 404 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 EID1Q9Y6B2 187 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 TRIM13O60858 407 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 UFL1O94874 794 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 AMPD3Q01432 767 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 RASA3Q14644 834 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 CNDP1Q96KN2 507 aa6.53□□□□□ -1.36
SCN2A-202ENST00000375427 SRGAP3O43295 1099 aa6.52□□□□□ -1.36
SCN2A-202ENST00000375427 EIF2S1P05198 315 aaKnown RBP6.52□□□□□ -1.36
SCN2A-202ENST00000375427 KCNA2P16389 499 aa6.52□□□□□ -1.36
SCN2A-202ENST00000375427 MMRN1Q13201 1228 aa6.52□□□□□ -1.36
SCN2A-202ENST00000375427 DAB2IPQ5VWQ8 1189 aa6.52□□□□□ -1.36
SCN2A-202ENST00000375427 KAZNQ674X7 775 aa6.52□□□□□ -1.36
SCN2A-202ENST00000375427 ESRP1Q6NXG1 681 aaKnown RBP6.52□□□□□ -1.36
SCN2A-202ENST00000375427 CIDECQ96AQ7 238 aaPredicted RBP6.52□□□□□ -1.36
SCN2A-202ENST00000375427 NAF1Q96HR8 494 aaKnown RBP6.52□□□□□ -1.36
SCN2A-202ENST00000375427 IARS2Q9NSE4 1012 aaKnown RBP6.52□□□□□ -1.36
SCN2A-202ENST00000375427 RNF216Q9NWF9 866 aaPredicted RBP6.52□□□□□ -1.36
SCN2A-202ENST00000375427 STX18Q9P2W9 335 aaKnown RBP6.52□□□□□ -1.36
SCN2A-202ENST00000375427 AKR1B10O60218 316 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 SSRP1Q08945 709 aaKnown RBP6.52□□□□□ -1.37
SCN2A-202ENST00000375427 EXOC3L4Q17RC7 722 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 HSP90AA4PQ58FG1 418 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 ABRAXAS1Q6UWZ7 409 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 IKBIPQ70UQ0 350 aa6.52□□□□□ -1.37
SCN2A-202ENST00000375427 ANKRD13AQ8IZ07 590 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms