RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ZBTB41Q5SVQ8 909 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 SPATA1Q5VX52 437 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 PANX2Q96RD6 677 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 STMN3Q9NZ72 180 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 KCNH3Q9ULD8 1083 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 PARP1P09874 1014 aaKnown RBP7.27□□□□□ -1.25
UBR4-204ENST00000375254 CASP14P31944 242 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 ATP6V0A2Q9Y487 856 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 ORC6Q9Y5N6 252 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 PABPN1LA6NDY0 278 aaKnown RBP7.27□□□□□ -1.25
UBR4-204ENST00000375254 HOXC8P31273 242 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 MRPS9P82933 396 aaKnown RBP7.27□□□□□ -1.25
UBR4-204ENST00000375254 MRPL28Q13084 256 aaKnown RBP7.27□□□□□ -1.25
UBR4-204ENST00000375254 ITFG2Q969R8 447 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 GOLGA8IPA6NC78 632 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 KRIT1O00522 736 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 ATP8B2P98198 1209 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 FBXO38Q6PIJ6 1188 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 MAGEA1P43355 309 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 STK26Q9P289 416 aa7.27□□□□□ -1.25
UBR4-204ENST00000375254 LARP6Q9BRS8 491 aaKnown RBP7.26□□□□□ -1.25
UBR4-204ENST00000375254 EPN3Q9H201 632 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 PRPF6O94906 941 aaKnown RBP7.26□□□□□ -1.25
UBR4-204ENST00000375254 CC2D2BQ6DHV5 1058 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 ABCF2Q9UG63 623 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 KCNG1Q9UIX4 513 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 CCDC194A0A1B0GVG4 234 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 GUCY1B3Q02153 619 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 SARM1Q6SZW1 724 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 CCDC25Q86WR0 208 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 NAP1L4Q99733 375 aaKnown RBP7.26□□□□□ -1.25
UBR4-204ENST00000375254 MFSD4BQ5TF39 518 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 LIN9Q5TKA1 542 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 DHX32Q7L7V1 743 aaKnown RBP7.26□□□□□ -1.25
UBR4-204ENST00000375254 B4GALNT2Q8NHY0 566 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 NCOA7Q8NI08 942 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 SSH1Q8WYL5 1049 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 KDM4CQ9H3R0 1056 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 MAD1L1Q9Y6D9 718 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 MYO1EQ12965 1108 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 TTC39AQ5SRH9 613 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 RPGRQ92834 1020 aaKnown RBP7.26□□□□□ -1.25
UBR4-204ENST00000375254 IFIH1Q9BYX4 1025 aaKnown RBP7.26□□□□□ -1.25
UBR4-204ENST00000375254 KIAA1468Q9P260 1216 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 RIC8AQ9NPQ8 531 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 USP40Q9NVE5 1235 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 TEKT1Q969V4 418 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 FAM200BP0CF97 657 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 ART3Q13508 389 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 BTN2A1Q7KYR7 527 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 GGA2Q9UJY4 613 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 CARD8Q9Y2G2 431 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 AMOTL2Q9Y2J4 779 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 ARHGAP35Q9NRY4 1499 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 IKBKBO14920 756 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 NCBP1Q09161 790 aaKnown RBP7.26□□□□□ -1.25
UBR4-204ENST00000375254 AGGF1Q8N302 714 aaeCLIP7.26□□□□□ -1.252e-6■■□□□ 12.9
UBR4-204ENST00000375254 NUDCD1Q96RS6 583 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 TM6SF1Q9BZW5 370 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 UBE4BO95155 1302 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 HNRNPRO43390 633 aaKnown RBP7.26□□□□□ -1.25
UBR4-204ENST00000375254 PYGBP11216 843 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 SERPINB1P30740 379 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 PDZD8Q8NEN9 1154 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 TDRD7Q8NHU6 1098 aaKnown RBP7.26□□□□□ -1.25
UBR4-204ENST00000375254 C16orf96A6NNT2 1141 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 S100A9P06702 114 aaKnown RBP7.26□□□□□ -1.25
UBR4-204ENST00000375254 RFWD2Q8NHY2 731 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 DTX3LQ8TDB6 740 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 KRT23Q9C075 422 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 TRAF3IP3Q9Y228 551 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 HSPA13P48723 471 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 MYLK4Q86YV6 388 aaPredicted RBP7.26□□□□□ -1.25
UBR4-204ENST00000375254 PITPNM3Q9BZ71 974 aa7.26□□□□□ -1.25
UBR4-204ENST00000375254 CUTAO60888 179 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 CEP55Q53EZ4 464 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 CC2D1AQ6P1N0 951 aaPredicted RBP7.25□□□□□ -1.25
UBR4-204ENST00000375254 ABCB6Q9NP58 842 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 EHD2Q9NZN4 543 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 ZNF76P36508 570 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 TTF1Q15361 905 aaPredicted RBP7.25□□□□□ -1.25
UBR4-204ENST00000375254 NAIF1Q69YI7 327 aaPredicted RBP7.25□□□□□ -1.25
UBR4-204ENST00000375254 CNNM4Q6P4Q7 775 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 BICC1Q9H694 974 aaKnown RBP7.25□□□□□ -1.25
UBR4-204ENST00000375254 STAT6P42226 847 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 OSBPL1AQ9BXW6 950 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 ZNF839A8K0R7 811 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 NR1D1P20393 614 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 CRELD2Q6UXH1 353 aaPredicted RBP7.25□□□□□ -1.25
UBR4-204ENST00000375254 USP28Q96RU2 1077 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 GIPC1O14908 333 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 KMT5BQ4FZB7 885 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 RSBN1LQ6PCB5 846 aaPredicted RBP7.25□□□□□ -1.25
UBR4-204ENST00000375254 BRD8Q9H0E9 1235 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 PCDHB15Q9Y5E8 787 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 PRR23AA6NEV1 266 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 EXOC5O00471 708 aa7.25□□□□□ -1.25
UBR4-204ENST00000375254 WDR46O15213 610 aaKnown RBP7.25□□□□□ -1.25
UBR4-204ENST00000375254 ASCC2Q9H1I8 757 aaPredicted RBP7.25□□□□□ -1.25
UBR4-204ENST00000375254 PODXLO00592 558 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms