RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 DHX58Q96C10 678 aa20.92■□□□□ 0.94
RXRB-202ENST00000374685 BRMS1Q9HCU9 246 aa20.92■□□□□ 0.94
RXRB-202ENST00000374685 LY75O60449 1722 aa20.92■□□□□ 0.94
RXRB-202ENST00000374685 LDHCP07864 332 aa20.92■□□□□ 0.94
RXRB-202ENST00000374685 SCNN1DP51172 638 aa20.92■□□□□ 0.94
RXRB-202ENST00000374685 HOMER1Q86YM7 354 aa20.92■□□□□ 0.94
RXRB-202ENST00000374685 VAT1LQ9HCJ6 419 aa20.92■□□□□ 0.94
RXRB-202ENST00000374685 NID2Q14112 1375 aa20.92■□□□□ 0.94
RXRB-202ENST00000374685 MYH6P13533 1939 aa20.92■□□□□ 0.94
RXRB-202ENST00000374685 G3V3G9 751 aa20.91■□□□□ 0.94
RXRB-202ENST00000374685 PPEF1O14829 653 aaPredicted RBP20.91■□□□□ 0.94
RXRB-202ENST00000374685 MCM7P33993 719 aa20.91■□□□□ 0.94
RXRB-202ENST00000374685 EIF6P56537 245 aaKnown RBP20.91■□□□□ 0.94
RXRB-202ENST00000374685 SLC27A3Q5K4L6 730 aa20.91■□□□□ 0.94
RXRB-202ENST00000374685 DCAF8Q5TAQ9 597 aa20.91■□□□□ 0.94
RXRB-202ENST00000374685 AEBP2Q6ZN18 517 aaPredicted RBP20.91■□□□□ 0.94
RXRB-202ENST00000374685 KLHL34Q8N239 644 aa20.91■□□□□ 0.94
RXRB-202ENST00000374685 KIAA1524Q8TCG1 905 aa20.91■□□□□ 0.94
RXRB-202ENST00000374685 VWA3AA6NCI4 1184 aa20.91■□□□□ 0.94
RXRB-202ENST00000374685 PCP11498 1178 aaKnown RBP20.91■□□□□ 0.94
RXRB-202ENST00000374685 SCG2P13521 617 aa20.91■□□□□ 0.94
RXRB-202ENST00000374685 PTPREP23469 700 aa20.91■□□□□ 0.94
RXRB-202ENST00000374685 BBOX1O75936 387 aa20.91■□□□□ 0.94
RXRB-202ENST00000374685 RCAN1P53805 252 aa20.91■□□□□ 0.94
RXRB-202ENST00000374685 ZNF622Q969S3 477 aaKnown RBP eCLIP20.91■□□□□ 0.943e-6■■■□□ 15.4
RXRB-202ENST00000374685 MKRN1Q9UHC7 482 aaKnown RBP20.91■□□□□ 0.94
RXRB-202ENST00000374685 HEATR3Q7Z4Q2 680 aa20.9■□□□□ 0.94
RXRB-202ENST00000374685 COL23A1Q86Y22 540 aaPredicted RBP20.9■□□□□ 0.94
RXRB-202ENST00000374685 XPO4Q9C0E2 1151 aaKnown RBP20.9■□□□□ 0.94
RXRB-202ENST00000374685 SLURP2P0DP57 97 aa20.9■□□□□ 0.94
RXRB-202ENST00000374685 PPP2R5BQ15173 497 aa20.9■□□□□ 0.94
RXRB-202ENST00000374685 CLEC10AQ8IUN9 316 aa20.89■□□□□ 0.94
RXRB-202ENST00000374685 TSC1Q92574 1164 aa20.89■□□□□ 0.94
RXRB-202ENST00000374685 C16orf45Q96MC5 204 aaPredicted RBP20.89■□□□□ 0.94
RXRB-202ENST00000374685 CCDC88AQ3V6T2 1871 aa20.89■□□□□ 0.93
RXRB-202ENST00000374685 CDC25AP30304 524 aa20.89■□□□□ 0.93
RXRB-202ENST00000374685 KIF5BP33176 963 aa20.89■□□□□ 0.93
RXRB-202ENST00000374685 CEP131Q9UPN4 1083 aa20.89■□□□□ 0.93
RXRB-202ENST00000374685 MMP10P09238 476 aa20.88■□□□□ 0.93
RXRB-202ENST00000374685 TTC38Q5R3I4 469 aa20.88■□□□□ 0.93
RXRB-202ENST00000374685 TRMT44Q8IYL2 757 aaKnown RBP20.88■□□□□ 0.93
RXRB-202ENST00000374685 EYA3Q99504 573 aa20.88■□□□□ 0.93
RXRB-202ENST00000374685 ZC3H12CQ9C0D7 883 aaKnown RBP20.88■□□□□ 0.93
RXRB-202ENST00000374685 PTGDRQ13258 359 aa20.88■□□□□ 0.93
RXRB-202ENST00000374685 TMC6Q7Z403 805 aa20.88■□□□□ 0.93
RXRB-202ENST00000374685 FLT1P17948 1338 aa20.88■□□□□ 0.93
RXRB-202ENST00000374685 TPM3P06753 285 aa20.87■□□□□ 0.93
RXRB-202ENST00000374685 RASA1P20936 1047 aa20.87■□□□□ 0.93
RXRB-202ENST00000374685 CDK8P49336 464 aa20.87■□□□□ 0.93
RXRB-202ENST00000374685 RBM6P78332 1123 aaKnown RBP20.87■□□□□ 0.93
RXRB-202ENST00000374685 POSTNQ15063 836 aa20.87■□□□□ 0.93
RXRB-202ENST00000374685 NPY5RQ15761 445 aa20.87■□□□□ 0.93
RXRB-202ENST00000374685 TMEM47Q9BQJ4 181 aa20.87■□□□□ 0.93
RXRB-202ENST00000374685 SRPRBQ9Y5M8 271 aaKnown RBP20.87■□□□□ 0.93
RXRB-202ENST00000374685 USP17L2Q6R6M4 530 aa20.87■□□□□ 0.93
RXRB-202ENST00000374685 SYMPKQ92797 1274 aaKnown RBP20.87■□□□□ 0.93
RXRB-202ENST00000374685 A0A087X0B3 334 aa20.86■□□□□ 0.93
RXRB-202ENST00000374685 RAD21O60216 631 aa20.86■□□□□ 0.93
RXRB-202ENST00000374685 TPM4P67936 248 aa20.86■□□□□ 0.93
RXRB-202ENST00000374685 KLHL10Q6JEL2 608 aa20.86■□□□□ 0.93
RXRB-202ENST00000374685 SARM1Q6SZW1 724 aa20.86■□□□□ 0.93
RXRB-202ENST00000374685 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.86■□□□□ 0.93
RXRB-202ENST00000374685 TIGD1Q96MW7 591 aa20.86■□□□□ 0.93
RXRB-202ENST00000374685 SERPINC1P01008 464 aa20.86■□□□□ 0.93
RXRB-202ENST00000374685 IL1R1P14778 569 aa20.86■□□□□ 0.93
RXRB-202ENST00000374685 BMP6P22004 513 aa20.86■□□□□ 0.93
RXRB-202ENST00000374685 TYW1BQ6NUM6 668 aa20.86■□□□□ 0.93
RXRB-202ENST00000374685 DBNDD1Q9H9R9 158 aa20.86■□□□□ 0.93
RXRB-202ENST00000374685 TTF2Q9UNY4 1162 aaKnown RBP20.86■□□□□ 0.93
RXRB-202ENST00000374685 ATP2B2Q01814 1243 aa20.86■□□□□ 0.93
RXRB-202ENST00000374685 PFKFB3Q16875 520 aaPredicted RBP20.86■□□□□ 0.93
RXRB-202ENST00000374685 MRFAP1L1Q96HT8 127 aa20.86■□□□□ 0.93
RXRB-202ENST00000374685 KCNQ5Q9NR82 932 aa20.86■□□□□ 0.93
RXRB-202ENST00000374685 TRMT1Q9NXH9 659 aaKnown RBP20.86■□□□□ 0.93
RXRB-202ENST00000374685 PPP4CP60510 307 aa20.85■□□□□ 0.93
RXRB-202ENST00000374685 NCAPHQ15003 741 aa20.85■□□□□ 0.93
RXRB-202ENST00000374685 DPP8Q6V1X1 898 aaPredicted RBP20.85■□□□□ 0.93
RXRB-202ENST00000374685 UBR3Q6ZT12 1888 aa20.85■□□□□ 0.93
RXRB-202ENST00000374685 COBLO75128 1261 aa20.85■□□□□ 0.93
RXRB-202ENST00000374685 SMARCE1Q969G3 411 aa20.85■□□□□ 0.93
RXRB-202ENST00000374685 FANCLQ9NW38 375 aa20.85■□□□□ 0.93
RXRB-202ENST00000374685 TUBE1Q9UJT0 475 aa20.85■□□□□ 0.93
RXRB-202ENST00000374685 DAGLAQ9Y4D2 1042 aa20.85■□□□□ 0.93
RXRB-202ENST00000374685 FAM205AQ6ZU69 1335 aa20.85■□□□□ 0.93
RXRB-202ENST00000374685 GPR75-ASB3A0A0A6YYF3 556 aa20.84■□□□□ 0.93
RXRB-202ENST00000374685 DGKHQ86XP1 1220 aa20.84■□□□□ 0.93
RXRB-202ENST00000374685 LRRC8AQ8IWT6 810 aa20.84■□□□□ 0.93
RXRB-202ENST00000374685 UBA5Q9GZZ9 404 aa20.84■□□□□ 0.93
RXRB-202ENST00000374685 MAD2L2Q9UI95 211 aa20.84■□□□□ 0.93
RXRB-202ENST00000374685 MAN1B1Q9UKM7 699 aa20.84■□□□□ 0.93
RXRB-202ENST00000374685 CYTH3O43739 400 aa20.84■□□□□ 0.93
RXRB-202ENST00000374685 CACNB3P54284 484 aa20.84■□□□□ 0.93
RXRB-202ENST00000374685 RHBDL3P58872 404 aa20.84■□□□□ 0.93
RXRB-202ENST00000374685 SLC35G1Q2M3R5 365 aa20.84■□□□□ 0.93
RXRB-202ENST00000374685 CFAP100Q494V2 611 aa20.84■□□□□ 0.93
RXRB-202ENST00000374685 SMYD4Q8IYR2 804 aaPredicted RBP20.84■□□□□ 0.93
RXRB-202ENST00000374685 ZNF592Q92610 1267 aa20.84■□□□□ 0.93
RXRB-202ENST00000374685 DPF2Q92785 391 aa20.84■□□□□ 0.93
RXRB-202ENST00000374685 CEP95Q96GE4 821 aa20.84■□□□□ 0.93
RXRB-202ENST00000374685 SKILP12757 684 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms