RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 RFC4P35249 363 aa19.4■□□□□ 0.7
RXRB-201ENST00000374680 CUL4BQ13620 913 aa19.4■□□□□ 0.7
RXRB-201ENST00000374680 DHX8Q14562 1220 aaKnown RBP19.4■□□□□ 0.7
RXRB-201ENST00000374680 RRAGBQ5VZM2 374 aa19.4■□□□□ 0.7
RXRB-201ENST00000374680 HEATR3Q7Z4Q2 680 aa19.4■□□□□ 0.7
RXRB-201ENST00000374680 LZTFL1Q9NQ48 299 aa19.4■□□□□ 0.7
RXRB-201ENST00000374680 IL17RBQ9NRM6 502 aa19.4■□□□□ 0.7
RXRB-201ENST00000374680 ETF1P62495 437 aaKnown RBP19.39■□□□□ 0.7
RXRB-201ENST00000374680 SPECC1LQ69YQ0 1117 aa19.39■□□□□ 0.7
RXRB-201ENST00000374680 RCSD1Q6JBY9 416 aa19.39■□□□□ 0.7
RXRB-201ENST00000374680 TYW1BQ6NUM6 668 aa19.39■□□□□ 0.7
RXRB-201ENST00000374680 PNMA1Q8ND90 353 aa19.39■□□□□ 0.7
RXRB-201ENST00000374680 VPS16Q9H269 839 aa19.39■□□□□ 0.7
RXRB-201ENST00000374680 LDHBP07195 334 aaKnown RBP19.39■□□□□ 0.69
RXRB-201ENST00000374680 SLFN14P0C7P3 912 aa19.39■□□□□ 0.69
RXRB-201ENST00000374680 ENOX1Q8TC92 643 aaKnown RBP19.39■□□□□ 0.69
RXRB-201ENST00000374680 RBM28Q9NW13 759 aaKnown RBP19.39■□□□□ 0.69
RXRB-201ENST00000374680 PPP2R2CQ9Y2T4 447 aa19.39■□□□□ 0.69
RXRB-201ENST00000374680 MYH13Q9UKX3 1938 aa19.39■□□□□ 0.69
RXRB-201ENST00000374680 FAM205AQ6ZU69 1335 aa19.39■□□□□ 0.69
RXRB-201ENST00000374680 SOWAHDA6NJG2 315 aa19.38■□□□□ 0.69
RXRB-201ENST00000374680 TC2NQ8N9U0 490 aa19.38■□□□□ 0.69
RXRB-201ENST00000374680 WDR24Q96S15 920 aa19.38■□□□□ 0.69
RXRB-201ENST00000374680 CARD6Q9BX69 1037 aa19.38■□□□□ 0.69
RXRB-201ENST00000374680 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.38■□□□□ 0.69
RXRB-201ENST00000374680 CICQ96RK0 1608 aaPredicted RBP19.38■□□□□ 0.69
RXRB-201ENST00000374680 PSDA5PKW4 1024 aaPredicted RBP19.38■□□□□ 0.69
RXRB-201ENST00000374680 REXO1L1PQ8IX06 675 aa19.38■□□□□ 0.69
RXRB-201ENST00000374680 BCL9LQ86UU0 1499 aa19.38■□□□□ 0.69
RXRB-201ENST00000374680 COL16A1Q07092 1604 aaPredicted RBP19.38■□□□□ 0.69
RXRB-201ENST00000374680 TSPY3P0CV98 308 aa19.38■□□□□ 0.69
RXRB-201ENST00000374680 TSPY8P0CW00 308 aa19.38■□□□□ 0.69
RXRB-201ENST00000374680 ZNF579Q8NAF0 562 aaKnown RBP19.38■□□□□ 0.69
RXRB-201ENST00000374680 UIMC1Q96RL1 719 aa19.38■□□□□ 0.69
RXRB-201ENST00000374680 CHD4Q14839 1912 aa19.38■□□□□ 0.69
RXRB-201ENST00000374680 RPS6KA4O75676 772 aa19.37■□□□□ 0.69
RXRB-201ENST00000374680 ZNF18P17022 549 aa19.37■□□□□ 0.69
RXRB-201ENST00000374680 INF2Q27J81 1249 aa19.37■□□□□ 0.69
RXRB-201ENST00000374680 NYXQ9GZU5 481 aa19.37■□□□□ 0.69
RXRB-201ENST00000374680 DACH1Q9UI36 760 aa19.37■□□□□ 0.69
RXRB-201ENST00000374680 GDAQ9Y2T3 454 aa19.37■□□□□ 0.69
RXRB-201ENST00000374680 F8W031 263 aaPredicted RBP19.37■□□□□ 0.69
RXRB-201ENST00000374680 TM4SF1P30408 202 aa19.37■□□□□ 0.69
RXRB-201ENST00000374680 RBL2Q08999 1139 aa19.37■□□□□ 0.69
RXRB-201ENST00000374680 KANK3Q6NY19 840 aa19.37■□□□□ 0.69
RXRB-201ENST00000374680 TRIM65Q6PJ69 517 aa19.37■□□□□ 0.69
RXRB-201ENST00000374680 FAM196AQ6ZSG2 479 aa19.37■□□□□ 0.69
RXRB-201ENST00000374680 ZNF444Q8N0Y2 327 aaPredicted RBP19.37■□□□□ 0.69
RXRB-201ENST00000374680 ERO1AQ96HE7 468 aa19.37■□□□□ 0.69
RXRB-201ENST00000374680 SYNRGQ9UMZ2 1314 aa19.37■□□□□ 0.69
RXRB-201ENST00000374680 DDX60Q8IY21 1712 aaKnown RBP19.36■□□□□ 0.69
RXRB-201ENST00000374680 CALM1P0DP23 149 aa19.36■□□□□ 0.69
RXRB-201ENST00000374680 CALM2P0DP24 149 aa19.36■□□□□ 0.69
RXRB-201ENST00000374680 CALM3P0DP25 149 aa19.36■□□□□ 0.69
RXRB-201ENST00000374680 ARHGAP29Q52LW3 1261 aa19.36■□□□□ 0.69
RXRB-201ENST00000374680 IGSF22Q8N9C0 903 aa19.36■□□□□ 0.69
RXRB-201ENST00000374680 MTRQ99707 1265 aa19.36■□□□□ 0.69
RXRB-201ENST00000374680 ST7Q9NRC1 585 aa19.36■□□□□ 0.69
RXRB-201ENST00000374680 ATP8A2Q9NTI2 1148 aa19.36■□□□□ 0.69
RXRB-201ENST00000374680 CGNQ9P2M7 1197 aaKnown RBP19.36■□□□□ 0.69
RXRB-201ENST00000374680 BARGINQ6ZT62 677 aa19.36■□□□□ 0.69
RXRB-201ENST00000374680 TMEM139Q8IV31 216 aa19.36■□□□□ 0.69
RXRB-201ENST00000374680 MNS1Q8NEH6 495 aa19.36■□□□□ 0.69
RXRB-201ENST00000374680 ANKRD2Q9GZV1 360 aa19.36■□□□□ 0.69
RXRB-201ENST00000374680 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.36■□□□□ 0.698e-7■□□□□ 9.2
RXRB-201ENST00000374680 EIF6P56537 245 aaKnown RBP19.35■□□□□ 0.69
RXRB-201ENST00000374680 SLC10A5Q5PT55 438 aa19.35■□□□□ 0.69
RXRB-201ENST00000374680 TAB2Q9NYJ8 693 aa19.35■□□□□ 0.69
RXRB-201ENST00000374680 XDHP47989 1333 aa19.35■□□□□ 0.69
RXRB-201ENST00000374680 ECM29Q5VYK3 1845 aa19.35■□□□□ 0.69
RXRB-201ENST00000374680 DDAH1O94760 285 aa19.35■□□□□ 0.69
RXRB-201ENST00000374680 TNFRSF25Q93038 417 aa19.35■□□□□ 0.69
RXRB-201ENST00000374680 TMEM60Q9H2L4 133 aa19.35■□□□□ 0.69
RXRB-201ENST00000374680 NT5DC1Q5TFE4 455 aa19.35■□□□□ 0.69
RXRB-201ENST00000374680 PPFIBP1Q86W92 1011 aa19.35■□□□□ 0.69
RXRB-201ENST00000374680 GPIHBP1Q8IV16 184 aa19.35■□□□□ 0.69
RXRB-201ENST00000374680 LRP5O75197 1615 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 CCDC194A0A1B0GVG4 234 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 TRIM49BA6NDI0 452 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 PPP1R3GB7ZBB8 358 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 NR1I3Q14994 352 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 PFKFB3Q16875 520 aaPredicted RBP19.34■□□□□ 0.69
RXRB-201ENST00000374680 SLC35G1Q2M3R5 365 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 BLIDQ8IZY5 108 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 CCDC34Q96HJ3 373 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 SRCAPQ6ZRS2 3230 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 CASP14P31944 242 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 PPP2R5BQ15173 497 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 USP17L2Q6R6M4 530 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 IQUBQ8NA54 791 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 FERMT2Q96AC1 680 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 MTA3Q9BTC8 594 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 UBA5Q9GZZ9 404 aa19.34■□□□□ 0.69
RXRB-201ENST00000374680 ARPP21Q9UBL0 812 aaPredicted RBP19.34■□□□□ 0.69
RXRB-201ENST00000374680 N4BP3O15049 544 aa19.33■□□□□ 0.69
RXRB-201ENST00000374680 ARHGAP6O43182 974 aa19.33■□□□□ 0.69
RXRB-201ENST00000374680 ORC4O43929 436 aa19.33■□□□□ 0.69
RXRB-201ENST00000374680 TFRCP02786 760 aaKnown RBP19.33■□□□□ 0.69
RXRB-201ENST00000374680 ATP2C1P98194 919 aaPredicted RBP19.33■□□□□ 0.69
RXRB-201ENST00000374680 C12orf60Q5U649 245 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms