RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 CNNM2Q9H8M5 875 aa21.68■■□□□ 1.06
PBX3-205ENST00000373492 INCENPQ9NQS7 918 aa21.68■■□□□ 1.06
PBX3-205ENST00000373492 CYP21A2P08686 494 aa21.67■■□□□ 1.06
PBX3-205ENST00000373492 GCLCP48506 637 aaPredicted RBP21.67■■□□□ 1.06
PBX3-205ENST00000373492 PPP4R3BQ5MIZ7 849 aa21.67■■□□□ 1.06
PBX3-205ENST00000373492 ESR2Q92731 530 aa21.67■■□□□ 1.06
PBX3-205ENST00000373492 IRX3P78415 501 aaPredicted RBP21.66■■□□□ 1.06
PBX3-205ENST00000373492 CAP1Q01518 475 aa21.66■■□□□ 1.06
PBX3-205ENST00000373492 ATP2B2Q01814 1243 aa21.66■■□□□ 1.06
PBX3-205ENST00000373492 TRDNQ13061 729 aa21.66■■□□□ 1.06
PBX3-205ENST00000373492 RNF20Q5VTR2 975 aa21.66■■□□□ 1.06
PBX3-205ENST00000373492 KRT23Q9C075 422 aa21.66■■□□□ 1.06
PBX3-205ENST00000373492 TACC3Q9Y6A5 838 aa21.66■■□□□ 1.06
PBX3-205ENST00000373492 NEDD4P46934 1319 aa21.65■■□□□ 1.06
PBX3-205ENST00000373492 A0A1W2PRG0 241 aa21.65■■□□□ 1.06
PBX3-205ENST00000373492 EIF5BO60841 1220 aaKnown RBP21.65■■□□□ 1.06
PBX3-205ENST00000373492 ZYXQ15942 572 aaKnown RBP21.65■■□□□ 1.06
PBX3-205ENST00000373492 ARHGAP39Q9C0H5 1083 aa21.65■■□□□ 1.06
PBX3-205ENST00000373492 PTPN22Q9Y2R2 807 aa21.65■■□□□ 1.06
PBX3-205ENST00000373492 USP17L15C9J2P7 530 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 USP17L13C9JLJ4 530 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 USP17L11C9JVI0 530 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 USP17L18D6R9N7 530 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 USP17L22D6RA61 530 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 USP17L17D6RBQ6 530 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 USP17L19D6RCP7 530 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 USP17L20D6RJB6 530 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 EEF2P13639 858 aaKnown RBP21.64■■□□□ 1.05
PBX3-205ENST00000373492 PSMC4P43686 418 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 USP17L24Q0WX57 530 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 FAM110CQ1W6H9 321 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 CLEC10AQ8IUN9 316 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 SIAH1Q8IUQ4 282 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 ANKRD13CQ8N6S4 541 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 GTF3C2Q8WUA4 911 aaPredicted RBP21.64■■□□□ 1.05
PBX3-205ENST00000373492 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.64■■□□□ 1.05
PBX3-205ENST00000373492 NYAP2Q9P242 653 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 HPS5Q9UPZ3 1129 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 TMX2Q9Y320 296 aa21.64■■□□□ 1.05
PBX3-205ENST00000373492 MGAMO43451 1857 aa21.63■■□□□ 1.05
PBX3-205ENST00000373492 IGKV6D-41A0A0C4DH26 115 aa21.63■■□□□ 1.05
PBX3-205ENST00000373492 TTLL1O95922 423 aa21.63■■□□□ 1.05
PBX3-205ENST00000373492 VCAM1P19320 739 aa21.63■■□□□ 1.05
PBX3-205ENST00000373492 HOXD10P28358 340 aa21.63■■□□□ 1.05
PBX3-205ENST00000373492 PRMT2P55345 433 aa21.63■■□□□ 1.05
PBX3-205ENST00000373492 FCGRTP55899 365 aa21.63■■□□□ 1.05
PBX3-205ENST00000373492 NECTIN1Q15223 517 aa21.63■■□□□ 1.05
PBX3-205ENST00000373492 CEP95Q96GE4 821 aa21.63■■□□□ 1.05
PBX3-205ENST00000373492 P2RX7Q99572 595 aaKnown RBP21.63■■□□□ 1.05
PBX3-205ENST00000373492 MTMR4Q9NYA4 1195 aa21.63■■□□□ 1.05
PBX3-205ENST00000373492 COL11A1P12107 1806 aaPredicted RBP21.62■■□□□ 1.05
PBX3-205ENST00000373492 CCDC85CA6NKD9 419 aa21.62■■□□□ 1.05
PBX3-205ENST00000373492 B4E1Z4 1266 aa21.62■■□□□ 1.05
PBX3-205ENST00000373492 CAPN15O75808 1086 aa21.62■■□□□ 1.05
PBX3-205ENST00000373492 CREB3L3Q68CJ9 461 aa21.62■■□□□ 1.05
PBX3-205ENST00000373492 CATSPERGQ6ZRH7 1159 aa21.62■■□□□ 1.05
PBX3-205ENST00000373492 RALYLQ86SE5 291 aaKnown RBP21.62■■□□□ 1.05
PBX3-205ENST00000373492 IQCA1Q86XH1 822 aa21.62■■□□□ 1.05
PBX3-205ENST00000373492 NCOA7Q8NI08 942 aa21.62■■□□□ 1.05
PBX3-205ENST00000373492 LPAR1Q92633 364 aa21.62■■□□□ 1.05
PBX3-205ENST00000373492 TRIM47Q96LD4 638 aa21.62■■□□□ 1.05
PBX3-205ENST00000373492 GOPCQ9HD26 462 aa21.62■■□□□ 1.05
PBX3-205ENST00000373492 CLIP2Q9UDT6 1046 aa21.62■■□□□ 1.05
PBX3-205ENST00000373492 E7EWF7 191 aa21.61■■□□□ 1.05
PBX3-205ENST00000373492 SLC27A2O14975 620 aa21.61■■□□□ 1.05
PBX3-205ENST00000373492 EPB41L2O43491 1005 aaKnown RBP21.61■■□□□ 1.05
PBX3-205ENST00000373492 KDM4AO75164 1064 aa21.61■■□□□ 1.05
PBX3-205ENST00000373492 FMNL1O95466 1100 aaPredicted RBP21.61■■□□□ 1.05
PBX3-205ENST00000373492 CTGFP29279 349 aa21.61■■□□□ 1.05
PBX3-205ENST00000373492 HERVK_113P62684 666 aa21.61■■□□□ 1.05
PBX3-205ENST00000373492 CCDC178Q5BJE1 867 aa21.61■■□□□ 1.05
PBX3-205ENST00000373492 TCP11L1Q9NUJ3 509 aa21.61■■□□□ 1.05
PBX3-205ENST00000373492 MORF4L1Q9UBU8 362 aa21.61■■□□□ 1.05
PBX3-205ENST00000373492 MYH6P13533 1939 aa21.61■■□□□ 1.05
PBX3-205ENST00000373492 RLFQ13129 1914 aa21.61■■□□□ 1.05
PBX3-205ENST00000373492 ZKSCAN1P17029 563 aaPredicted RBP21.6■■□□□ 1.05
PBX3-205ENST00000373492 RPAP3Q9H6T3 665 aaPredicted RBP21.6■■□□□ 1.05
PBX3-205ENST00000373492 VCPKMTQ9H867 229 aa21.6■■□□□ 1.05
PBX3-205ENST00000373492 SYNPO2Q9UMS6 1093 aa21.6■■□□□ 1.05
PBX3-205ENST00000373492 STX8Q9UNK0 236 aa21.6■■□□□ 1.05
PBX3-205ENST00000373492 RAD21O60216 631 aa21.59■■□□□ 1.05
PBX3-205ENST00000373492 NMT2O60551 498 aa21.59■■□□□ 1.05
PBX3-205ENST00000373492 MKL1Q969V6 931 aa21.59■■□□□ 1.05
PBX3-205ENST00000373492 IL17RBQ9NRM6 502 aa21.59■■□□□ 1.05
PBX3-205ENST00000373492 ZSWIM5Q9P217 1185 aa21.59■■□□□ 1.05
PBX3-205ENST00000373492 SRRDQ9UH36 339 aa21.59■■□□□ 1.05
PBX3-205ENST00000373492 LBX2Q6XYB7 198 aa21.58■■□□□ 1.05
PBX3-205ENST00000373492 GPRC5AQ8NFJ5 357 aa21.58■■□□□ 1.05
PBX3-205ENST00000373492 TTC14Q96N46 770 aa21.58■■□□□ 1.05
PBX3-205ENST00000373492 UBAC1Q9BSL1 405 aa21.58■■□□□ 1.05
PBX3-205ENST00000373492 MCCP23508 829 aa21.57■■□□□ 1.04
PBX3-205ENST00000373492 KRT32Q14532 448 aa21.57■■□□□ 1.04
PBX3-205ENST00000373492 KIAA1755Q5JYT7 1200 aa21.57■■□□□ 1.04
PBX3-205ENST00000373492 STOX1Q6ZVD7 989 aa21.57■■□□□ 1.04
PBX3-205ENST00000373492 ZKSCAN3Q9BRR0 538 aa21.57■■□□□ 1.04
PBX3-205ENST00000373492 HOXC10Q9NYD6 342 aa21.57■■□□□ 1.04
PBX3-205ENST00000373492 RBPJLQ9UBG7 517 aa21.57■■□□□ 1.04
PBX3-205ENST00000373492 PTCH2Q9Y6C5 1203 aa21.57■■□□□ 1.04
PBX3-205ENST00000373492 TAF6LQ9Y6J9 622 aa21.57■■□□□ 1.04
PBX3-205ENST00000373492 MYPNQ86TC9 1320 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms