RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 ERICH2A1L162 156 aa15.46■□□□□ 0.07
USP49-201ENST00000373006 ZCRB1Q8TBF4 217 aaKnown RBP15.46■□□□□ 0.07
USP49-201ENST00000373006 PRDM11Q9NQV5 511 aa15.46■□□□□ 0.07
USP49-201ENST00000373006 FBXO3Q9UK99 471 aa15.46■□□□□ 0.07
USP49-201ENST00000373006 CAMTA1Q9Y6Y1 1673 aa15.46■□□□□ 0.07
USP49-201ENST00000373006 PLEKHG2Q9H7P9 1386 aa15.46■□□□□ 0.06
USP49-201ENST00000373006 SMIM22K7EJ46 135 aa15.46■□□□□ 0.06
USP49-201ENST00000373006 TUBB2AQ13885 445 aa15.46■□□□□ 0.06
USP49-201ENST00000373006 CYP26C1Q6V0L0 522 aa15.46■□□□□ 0.06
USP49-201ENST00000373006 CCDC148Q8NFR7 591 aa15.46■□□□□ 0.06
USP49-201ENST00000373006 FAM212AQ96EL1 285 aa15.46■□□□□ 0.06
USP49-201ENST00000373006 TUBB2BQ9BVA1 445 aa15.46■□□□□ 0.06
USP49-201ENST00000373006 AATFQ9NY61 560 aaKnown RBP eCLIP15.46■□□□□ 0.06
USP49-201ENST00000373006 GSG1L2A8MUP6 293 aa15.45■□□□□ 0.06
USP49-201ENST00000373006 PCCAP05165 728 aaPredicted RBP15.45■□□□□ 0.06
USP49-201ENST00000373006 AMPD2Q01433 879 aa15.45■□□□□ 0.06
USP49-201ENST00000373006 PACS2Q86VP3 889 aa15.45■□□□□ 0.06
USP49-201ENST00000373006 GSPT2Q8IYD1 628 aaKnown RBP15.45■□□□□ 0.06
USP49-201ENST00000373006 MIGA1Q8NAN2 632 aa15.45■□□□□ 0.06
USP49-201ENST00000373006 GSDMAQ96QA5 445 aa15.45■□□□□ 0.06
USP49-201ENST00000373006 MMS19Q96T76 1030 aa15.45■□□□□ 0.06
USP49-201ENST00000373006 DEF6Q9H4E7 631 aa15.45■□□□□ 0.06
USP49-201ENST00000373006 RIC1Q4ADV7 1423 aa15.45■□□□□ 0.06
USP49-201ENST00000373006 SH3RF1Q7Z6J0 888 aa15.45■□□□□ 0.06
USP49-201ENST00000373006 ZNF654Q8IZM8 581 aa15.45■□□□□ 0.06
USP49-201ENST00000373006 ZBTB38Q8NAP3 1195 aaPredicted RBP15.45■□□□□ 0.06
USP49-201ENST00000373006 KRT23Q9C075 422 aa15.45■□□□□ 0.06
USP49-201ENST00000373006 EFCC1Q9HA90 598 aa15.45■□□□□ 0.06
USP49-201ENST00000373006 LMTK3Q96Q04 1460 aa15.45■□□□□ 0.06
USP49-201ENST00000373006 SYF2O95926 243 aaKnown RBP15.44■□□□□ 0.06
USP49-201ENST00000373006 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.44■□□□□ 0.06
USP49-201ENST00000373006 REXO2Q9Y3B8 237 aaKnown RBP15.44■□□□□ 0.06
USP49-201ENST00000373006 EPN1Q9Y6I3 576 aaPredicted RBP15.44■□□□□ 0.06
USP49-201ENST00000373006 TJP1Q07157 1748 aa15.44■□□□□ 0.06
USP49-201ENST00000373006 PDE8BO95263 885 aa15.44■□□□□ 0.06
USP49-201ENST00000373006 COPB1P53618 953 aaKnown RBP15.44■□□□□ 0.06
USP49-201ENST00000373006 UBXN1Q04323 297 aa15.44■□□□□ 0.06
USP49-201ENST00000373006 CCDC51Q96ER9 411 aa15.44■□□□□ 0.06
USP49-201ENST00000373006 CNNM2Q9H8M5 875 aa15.44■□□□□ 0.06
USP49-201ENST00000373006 SLC4A4Q9Y6R1 1079 aa15.44■□□□□ 0.06
USP49-201ENST00000373006 DDX60Q8IY21 1712 aaKnown RBP15.44■□□□□ 0.06
USP49-201ENST00000373006 ANKRD18BA2A2Z9 1011 aa15.44■□□□□ 0.06
USP49-201ENST00000373006 ATP1A1P05023 1023 aaKnown RBP15.44■□□□□ 0.06
USP49-201ENST00000373006 HLFQ16534 295 aa15.44■□□□□ 0.06
USP49-201ENST00000373006 LCORLQ8N3X6 602 aa15.44■□□□□ 0.06
USP49-201ENST00000373006 V9GY48 417 aaPredicted RBP15.44■□□□□ 0.06
USP49-201ENST00000373006 ABCC12Q96J65 1359 aa15.43■□□□□ 0.06
USP49-201ENST00000373006 MINDY4BA8MYZ0 360 aa15.43■□□□□ 0.06
USP49-201ENST00000373006 TUBB4BP68371 445 aa15.43■□□□□ 0.06
USP49-201ENST00000373006 EEF2KMTQ96G04 330 aa15.43■□□□□ 0.06
USP49-201ENST00000373006 ACBD3Q9H3P7 528 aa15.43■□□□□ 0.06
USP49-201ENST00000373006 CCDC196A0A1B0GTZ2 297 aa15.43■□□□□ 0.06
USP49-201ENST00000373006 KCNJ18B7U540 433 aa15.43■□□□□ 0.06
USP49-201ENST00000373006 NDUFA10O95299 355 aa15.43■□□□□ 0.06
USP49-201ENST00000373006 KCNJ12Q14500 433 aa15.43■□□□□ 0.06
USP49-201ENST00000373006 WDR93Q6P2C0 686 aa15.43■□□□□ 0.06
USP49-201ENST00000373006 MED4Q9NPJ6 270 aa15.43■□□□□ 0.06
USP49-201ENST00000373006 XDHP47989 1333 aa15.43■□□□□ 0.06
USP49-201ENST00000373006 RPS6KA5O75582 802 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 MAGEA9P43362 315 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 ALX1Q15699 326 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 MSL3Q8N5Y2 521 aaKnown RBP15.42■□□□□ 0.06
USP49-201ENST00000373006 VGLL2Q8N8G2 317 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 SPATA5Q8NB90 893 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 AFAP1L1Q8TED9 768 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 UBAC1Q9BSL1 405 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 MKRN1Q9UHC7 482 aaKnown RBP15.42■□□□□ 0.06
USP49-201ENST00000373006 ECM29Q5VYK3 1845 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 MST1RQ04912 1400 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 TTC26A0AVF1 554 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 USP14P54578 494 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 PTGDRQ13258 359 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 TCP11X2Q5H9J9 407 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 MICALL1Q8N3F8 863 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 NELFBQ8WX92 580 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 DNAJC5Q9H3Z4 198 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 LIMA1Q9UHB6 759 aaKnown RBP15.42■□□□□ 0.06
USP49-201ENST00000373006 GDAQ9Y2T3 454 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 MYO5AQ9Y4I1 1855 aaKnown RBP15.42■□□□□ 0.06
USP49-201ENST00000373006 MYH8P13535 1937 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 ITIH6Q6UXX5 1313 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 FECHP22830 423 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 MAP3K12Q12852 859 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 RASGRF1Q13972 1273 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 CCDC122Q5T0U0 273 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 KIF6Q6ZMV9 814 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 DNAJC10Q8IXB1 793 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 MTRQ99707 1265 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 C1orf167Q5SNV9 1468 aa15.42■□□□□ 0.06
USP49-201ENST00000373006 TRIM49BA6NDI0 452 aa15.41■□□□□ 0.06
USP49-201ENST00000373006 SEMA3EO15041 775 aa15.41■□□□□ 0.06
USP49-201ENST00000373006 ZNF185O15231 689 aa15.41■□□□□ 0.06
USP49-201ENST00000373006 MYBL2P10244 700 aa15.41■□□□□ 0.06
USP49-201ENST00000373006 KRT2P35908 639 aa15.41■□□□□ 0.06
USP49-201ENST00000373006 GGCXP38435 758 aa15.41■□□□□ 0.06
USP49-201ENST00000373006 PKN1Q16512 942 aa15.41■□□□□ 0.06
USP49-201ENST00000373006 TRAPPC11Q7Z392 1133 aa15.41■□□□□ 0.06
USP49-201ENST00000373006 MYO1AQ9UBC5 1043 aa15.41■□□□□ 0.06
USP49-201ENST00000373006 HPCAL4Q9UM19 191 aa15.41■□□□□ 0.06
USP49-201ENST00000373006 SAR1BQ9Y6B6 198 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms