RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 CNTNAP1P78357 1384 aa20.86■□□□□ 0.93
CD40-202ENST00000372285 SBF1O95248 1867 aa20.85■□□□□ 0.93
CD40-202ENST00000372285 TCP10L2B9ZVM9 353 aa20.85■□□□□ 0.93
CD40-202ENST00000372285 EIF6P56537 245 aaKnown RBP20.85■□□□□ 0.93
CD40-202ENST00000372285 CERKLQ49MI3 558 aaPredicted RBP20.85■□□□□ 0.93
CD40-202ENST00000372285 MYOZ2Q9NPC6 264 aa20.85■□□□□ 0.93
CD40-202ENST00000372285 SLURP2P0DP57 97 aa20.84■□□□□ 0.93
CD40-202ENST00000372285 FAM83AQ86UY5 434 aa20.84■□□□□ 0.93
CD40-202ENST00000372285 DPF2Q92785 391 aa20.84■□□□□ 0.93
CD40-202ENST00000372285 CSRNP1Q96S65 589 aa20.84■□□□□ 0.93
CD40-202ENST00000372285 FOXP1Q9H334 677 aaPredicted RBP20.84■□□□□ 0.93
CD40-202ENST00000372285 TMEM63CQ9P1W3 806 aa20.84■□□□□ 0.93
CD40-202ENST00000372285 KCNJ14Q9UNX9 436 aa20.84■□□□□ 0.93
CD40-202ENST00000372285 hCG_1642624A0A1W2PR95 340 aa20.84■□□□□ 0.93
CD40-202ENST00000372285 FAM196BA6NMK8 535 aa20.84■□□□□ 0.93
CD40-202ENST00000372285 MYO1BO43795 1136 aa20.84■□□□□ 0.93
CD40-202ENST00000372285 PARP1P09874 1014 aaKnown RBP20.84■□□□□ 0.93
CD40-202ENST00000372285 SCG2P13521 617 aa20.84■□□□□ 0.93
CD40-202ENST00000372285 SMARCA1P28370 1054 aa20.84■□□□□ 0.93
CD40-202ENST00000372285 GNL2Q13823 731 aaKnown RBP20.84■□□□□ 0.93
CD40-202ENST00000372285 PFKFB3Q16875 520 aaPredicted RBP20.84■□□□□ 0.93
CD40-202ENST00000372285 DIS3L2Q8IYB7 885 aaKnown RBP20.84■□□□□ 0.93
CD40-202ENST00000372285 SYAP1Q96A49 352 aaPredicted RBP20.84■□□□□ 0.93
CD40-202ENST00000372285 SHISA4Q96DD7 197 aa20.84■□□□□ 0.93
CD40-202ENST00000372285 PHF20Q9BVI0 1012 aa20.84■□□□□ 0.93
CD40-202ENST00000372285 SPZ1Q9BXG8 430 aa20.84■□□□□ 0.93
CD40-202ENST00000372285 POLR3EQ9NVU0 708 aa20.84■□□□□ 0.93
CD40-202ENST00000372285 HERC5Q9UII4 1024 aaKnown RBP20.84■□□□□ 0.93
CD40-202ENST00000372285 MPHOSPH10O00566 681 aaKnown RBP20.83■□□□□ 0.92
CD40-202ENST00000372285 WNT10BO00744 389 aa20.83■□□□□ 0.92
CD40-202ENST00000372285 ZSCAN23Q3MJ62 389 aa20.83■□□□□ 0.92
CD40-202ENST00000372285 FTOQ9C0B1 505 aaKnown RBP eCLIP20.83■□□□□ 0.92
CD40-202ENST00000372285 FHDC1Q9C0D6 1143 aaPredicted RBP20.83■□□□□ 0.92
CD40-202ENST00000372285 CLIP2Q9UDT6 1046 aa20.83■□□□□ 0.92
CD40-202ENST00000372285 KLRF2D3W0D1 207 aa20.82■□□□□ 0.92
CD40-202ENST00000372285 YEATS4O95619 227 aa20.82■□□□□ 0.92
CD40-202ENST00000372285 SNHG28P0DPA3 235 aa20.82■□□□□ 0.92
CD40-202ENST00000372285 NASPP49321 788 aaPredicted RBP20.82■□□□□ 0.92
CD40-202ENST00000372285 SLC35G1Q2M3R5 365 aa20.82■□□□□ 0.92
CD40-202ENST00000372285 NOSTRINQ8IVI9 506 aa20.82■□□□□ 0.92
CD40-202ENST00000372285 PGBD1Q96JS3 809 aa20.82■□□□□ 0.92
CD40-202ENST00000372285 VPS54Q9P1Q0 977 aa20.82■□□□□ 0.92
CD40-202ENST00000372285 SHTN1A0MZ66 631 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 BTBD18B2RXH4 712 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 DEKP35659 375 aaKnown RBP20.81■□□□□ 0.92
CD40-202ENST00000372285 GMPSP49915 693 aaPredicted RBP20.81■□□□□ 0.92
CD40-202ENST00000372285 ZNF445P59923 1031 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 CEBPZQ03701 1054 aaKnown RBP20.81■□□□□ 0.92
CD40-202ENST00000372285 NBPF9Q3BBW0 867 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 CLEC10AQ8IUN9 316 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 MKL1Q969V6 931 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 KANSL2Q9H9L4 492 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 VEZTQ9HBM0 779 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 NYAP2Q9P242 653 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 GOLGA6L4A6NEF3 574 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 USP17L5A8MUK1 530 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 CYTH3O43739 400 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 PDHBP11177 359 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 ASPRV1Q53RT3 343 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 USP17L2Q6R6M4 530 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 TMEM179Q6ZVK1 233 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 SH3GLB2Q9NR46 395 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 MTMR7Q9Y216 660 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 CLIC4Q9Y696 253 aa20.81■□□□□ 0.92
CD40-202ENST00000372285 ANO1Q5XXA6 986 aa20.8■□□□□ 0.92
CD40-202ENST00000372285 LRRC47Q8N1G4 583 aaKnown RBP20.8■□□□□ 0.92
CD40-202ENST00000372285 LINC00301Q8NCQ3 95 aa20.8■□□□□ 0.92
CD40-202ENST00000372285 PGAP2Q9UHJ9 254 aa20.8■□□□□ 0.92
CD40-202ENST00000372285 ISY1Q9ULR0 285 aaKnown RBP20.8■□□□□ 0.92
CD40-202ENST00000372285 FSD2A1L4K1 749 aa20.79■□□□□ 0.92
CD40-202ENST00000372285 GOLGA8HP0CJ92 632 aa20.79■□□□□ 0.92
CD40-202ENST00000372285 ABCB5Q2M3G0 1257 aa20.79■□□□□ 0.92
CD40-202ENST00000372285 ARHGAP27Q6ZUM4 889 aa20.79■□□□□ 0.92
CD40-202ENST00000372285 RASGRP2Q7LDG7 609 aa20.79■□□□□ 0.92
CD40-202ENST00000372285 FAM177A1Q8N128 213 aaPredicted RBP20.79■□□□□ 0.92
CD40-202ENST00000372285 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.79■□□□□ 0.92
CD40-202ENST00000372285 GJA3Q9Y6H8 435 aa20.79■□□□□ 0.92
CD40-202ENST00000372285 ZNF541Q9H0D2 1346 aa20.79■□□□□ 0.92
CD40-202ENST00000372285 TBC1D12O60347 775 aa20.78■□□□□ 0.92
CD40-202ENST00000372285 LMNB1P20700 586 aa20.78■□□□□ 0.92
CD40-202ENST00000372285 KRT2P35908 639 aa20.78■□□□□ 0.92
CD40-202ENST00000372285 NPY5RQ15761 445 aa20.78■□□□□ 0.92
CD40-202ENST00000372285 MICALL2Q8IY33 904 aa20.78■□□□□ 0.92
CD40-202ENST00000372285 KCNG4Q8TDN1 519 aa20.78■□□□□ 0.92
CD40-202ENST00000372285 OXER1Q8TDS5 423 aa20.78■□□□□ 0.92
CD40-202ENST00000372285 CNOT7Q9UIV1 285 aaKnown RBP20.78■□□□□ 0.92
CD40-202ENST00000372285 SOCS7O14512 581 aa20.78■□□□□ 0.92
CD40-202ENST00000372285 VEGFAP15692 232 aaPredicted RBP20.78■□□□□ 0.92
CD40-202ENST00000372285 TNNI2P48788 182 aa20.78■□□□□ 0.92
CD40-202ENST00000372285 SEPT2Q15019 361 aa20.78■□□□□ 0.92
CD40-202ENST00000372285 STK38Q15208 465 aa20.78■□□□□ 0.92
CD40-202ENST00000372285 SHROOM1Q2M3G4 852 aaPredicted RBP20.78■□□□□ 0.92
CD40-202ENST00000372285 CCDC183Q5T5S1 534 aa20.78■□□□□ 0.92
CD40-202ENST00000372285 RBM26Q5T8P6 1007 aaKnown RBP20.78■□□□□ 0.92
CD40-202ENST00000372285 RIOX1Q9H6W3 641 aa20.78■□□□□ 0.92
CD40-202ENST00000372285 EEF2P13639 858 aaKnown RBP20.77■□□□□ 0.92
CD40-202ENST00000372285 NR5A1Q13285 461 aa20.77■□□□□ 0.92
CD40-202ENST00000372285 RRP1BQ14684 758 aaKnown RBP20.77■□□□□ 0.92
CD40-202ENST00000372285 SLC39A14Q15043 492 aa20.77■□□□□ 0.92
CD40-202ENST00000372285 TPRNQ4KMQ1 711 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms