RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 FAM196BA6NMK8 535 aa13.4□□□□□ -0.26
PDE6C-201ENST00000371447 MPHOSPH10O00566 681 aaKnown RBP13.4□□□□□ -0.26
PDE6C-201ENST00000371447 PRPF3O43395 683 aaKnown RBP13.4□□□□□ -0.26
PDE6C-201ENST00000371447 TOP1P11387 765 aaKnown RBP13.4□□□□□ -0.26
PDE6C-201ENST00000371447 FUT2Q10981 343 aa13.4□□□□□ -0.26
PDE6C-201ENST00000371447 RC3H1Q5TC82 1133 aaKnown RBP13.4□□□□□ -0.26
PDE6C-201ENST00000371447 RCSD1Q6JBY9 416 aa13.4□□□□□ -0.26
PDE6C-201ENST00000371447 SARM1Q6SZW1 724 aa13.4□□□□□ -0.26
PDE6C-201ENST00000371447 CCDC112Q8NEF3 446 aa13.4□□□□□ -0.26
PDE6C-201ENST00000371447 ZNF622Q969S3 477 aaKnown RBP eCLIP13.4□□□□□ -0.26
PDE6C-201ENST00000371447 PHF20Q9BVI0 1012 aa13.4□□□□□ -0.26
PDE6C-201ENST00000371447 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.4□□□□□ -0.26
PDE6C-201ENST00000371447 ANAPC4Q9UJX5 808 aa13.4□□□□□ -0.26
PDE6C-201ENST00000371447 MYH7P12883 1935 aa13.39□□□□□ -0.27
PDE6C-201ENST00000371447 TULP1O00294 542 aaPredicted RBP13.39□□□□□ -0.27
PDE6C-201ENST00000371447 TYW1BQ6NUM6 668 aa13.39□□□□□ -0.27
PDE6C-201ENST00000371447 LRRC47Q8N1G4 583 aaKnown RBP13.39□□□□□ -0.27
PDE6C-201ENST00000371447 PLCH1Q4KWH8 1693 aa13.39□□□□□ -0.27
PDE6C-201ENST00000371447 CCDC194A0A1B0GVG4 234 aa13.39□□□□□ -0.27
PDE6C-201ENST00000371447 RBM5P52756 815 aaKnown RBP eCLIP13.39□□□□□ -0.27
PDE6C-201ENST00000371447 CCZ1BP86790 482 aa13.39□□□□□ -0.27
PDE6C-201ENST00000371447 CCZ1P86791 482 aaPredicted RBP13.39□□□□□ -0.27
PDE6C-201ENST00000371447 TCP10Q12799 353 aa13.39□□□□□ -0.27
PDE6C-201ENST00000371447 KARSQ15046 597 aaKnown RBP13.39□□□□□ -0.27
PDE6C-201ENST00000371447 C12orf60Q5U649 245 aa13.39□□□□□ -0.27
PDE6C-201ENST00000371447 GPIHBP1Q8IV16 184 aa13.39□□□□□ -0.27
PDE6C-201ENST00000371447 SRPRBQ9Y5M8 271 aaKnown RBP13.39□□□□□ -0.27
PDE6C-201ENST00000371447 CNTNAP5Q8WYK1 1306 aa13.39□□□□□ -0.27
PDE6C-201ENST00000371447 DYNC1I1O14576 645 aa13.39□□□□□ -0.27
PDE6C-201ENST00000371447 ERCC3P19447 782 aa13.39□□□□□ -0.27
PDE6C-201ENST00000371447 CCT6AP40227 531 aaKnown RBP13.39□□□□□ -0.27
PDE6C-201ENST00000371447 EYA3Q99504 573 aa13.39□□□□□ -0.27
PDE6C-201ENST00000371447 FAM205AQ6ZU69 1335 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 SYT10Q6XYQ8 523 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 PRDM10Q9NQV6 1147 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 RBM28Q9NW13 759 aaKnown RBP13.38□□□□□ -0.27
PDE6C-201ENST00000371447 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.38□□□□□ -0.27
PDE6C-201ENST00000371447 CALM1P0DP23 149 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 CALM2P0DP24 149 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 CALM3P0DP25 149 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 KIF5BP33176 963 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 LETM2Q2VYF4 491 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 PRIMPOLQ96LW4 560 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 TMEM47Q9BQJ4 181 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 HSD3B7Q9H2F3 369 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 GPCPD1Q9NPB8 672 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 KLRF2D3W0D1 207 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 SEMA3EO15041 775 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 RRP9O43818 475 aaKnown RBP13.38□□□□□ -0.27
PDE6C-201ENST00000371447 DDR1Q08345 913 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 JAKMIP3Q5VZ66 844 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 TUBE1Q9UJT0 475 aa13.38□□□□□ -0.27
PDE6C-201ENST00000371447 AHDC1Q5TGY3 1603 aaPredicted RBP13.37□□□□□ -0.27
PDE6C-201ENST00000371447 KCNQ5Q9NR82 932 aa13.37□□□□□ -0.27
PDE6C-201ENST00000371447 NAPAP54920 295 aa13.37□□□□□ -0.27
PDE6C-201ENST00000371447 TIGD1Q96MW7 591 aa13.37□□□□□ -0.27
PDE6C-201ENST00000371447 DESI2Q9BSY9 194 aa13.37□□□□□ -0.27
PDE6C-201ENST00000371447 DBNDD1Q9H9R9 158 aa13.37□□□□□ -0.27
PDE6C-201ENST00000371447 ANKRD36CQ5JPF3 1778 aa13.37□□□□□ -0.27
PDE6C-201ENST00000371447 CICQ96RK0 1608 aaPredicted RBP13.36□□□□□ -0.27
PDE6C-201ENST00000371447 DDAH1O94760 285 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 CDK8P49336 464 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 RRAGBQ5VZM2 374 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 ZSCAN29Q8IWY8 852 aaPredicted RBP13.36□□□□□ -0.27
PDE6C-201ENST00000371447 PAGE5Q96GU1 130 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 RBM17Q96I25 401 aaKnown RBP13.36□□□□□ -0.27
PDE6C-201ENST00000371447 CTNND2Q9UQB3 1225 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 LEMD3Q9Y2U8 911 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 ACTN4O43707 911 aaKnown RBP13.36□□□□□ -0.27
PDE6C-201ENST00000371447 CYTH3O43739 400 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 NRDCO43847 1150 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 CD44P16070 742 aaKnown RBP13.36□□□□□ -0.27
PDE6C-201ENST00000371447 BLIDQ8IZY5 108 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 CCAR2Q8N163 923 aaKnown RBP13.36□□□□□ -0.27
PDE6C-201ENST00000371447 ZNF710Q8N1W2 664 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 TBC1D16Q8TBP0 767 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 ZC3H12CQ9C0D7 883 aaKnown RBP13.36□□□□□ -0.27
PDE6C-201ENST00000371447 BIN2Q9UBW5 565 aaPredicted RBP13.36□□□□□ -0.27
PDE6C-201ENST00000371447 PCDHAC2Q9Y5I4 1007 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 LDHCP07864 332 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 CBX1P83916 185 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 CUL4BQ13620 913 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 NPY5RQ15761 445 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 WWC2Q6AWC2 1192 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 CEP95Q96GE4 821 aa13.36□□□□□ -0.27
PDE6C-201ENST00000371447 MYH13Q9UKX3 1938 aa13.35□□□□□ -0.27
PDE6C-201ENST00000371447 TEX33O43247 280 aa13.35□□□□□ -0.27
PDE6C-201ENST00000371447 ORC4O43929 436 aa13.35□□□□□ -0.27
PDE6C-201ENST00000371447 CDC25BP30305 580 aa13.35□□□□□ -0.27
PDE6C-201ENST00000371447 SLC16A2P36021 539 aa13.35□□□□□ -0.27
PDE6C-201ENST00000371447 E4F1Q66K89 784 aaPredicted RBP13.35□□□□□ -0.27
PDE6C-201ENST00000371447 TMEM60Q9H2L4 133 aa13.35□□□□□ -0.27
PDE6C-201ENST00000371447 DNAI1Q9UI46 699 aa13.35□□□□□ -0.27
PDE6C-201ENST00000371447 TTF2Q9UNY4 1162 aaKnown RBP13.35□□□□□ -0.27
PDE6C-201ENST00000371447 RASA1P20936 1047 aa13.35□□□□□ -0.27
PDE6C-201ENST00000371447 GSDMDP57764 484 aa13.35□□□□□ -0.27
PDE6C-201ENST00000371447 MDM2Q00987 491 aaPredicted RBP13.35□□□□□ -0.27
PDE6C-201ENST00000371447 IL17AQ16552 155 aa13.35□□□□□ -0.27
PDE6C-201ENST00000371447 PFKFB3Q16875 520 aaPredicted RBP13.35□□□□□ -0.27
PDE6C-201ENST00000371447 SLC35G1Q2M3R5 365 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms