RNA–Protein interactions for RNA: ENST00000371196.6

CTCFL-202, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-202ENST00000371196 A1BGP04217 495 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 ATP1A2P50993 1020 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 NAP1L1P55209 391 aaKnown RBP13.04□□□□□ -0.32
CTCFL-202ENST00000371196 HERVK_113P62684 666 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 PPP2R5AQ15172 486 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 CCDC40Q4G0X9 1142 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 RNF187Q5TA31 235 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-202ENST00000371196 LRCH2Q5VUJ6 765 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 ALS2CLQ60I27 953 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 PROSER2Q86WR7 435 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-202ENST00000371196 EHBP1Q8NDI1 1231 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 AIDAQ96BJ3 306 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 CSRNP2Q9H175 543 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 VCPKMTQ9H867 229 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 PPP1R12AO14974 1030 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-202ENST00000371196 COPB1P53618 953 aaKnown RBP13.04□□□□□ -0.32
CTCFL-202ENST00000371196 SAFBQ15424 915 aaKnown RBP eCLIP13.04□□□□□ -0.32
CTCFL-202ENST00000371196 RILPL1Q5EBL4 403 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 WLSQ5T9L3 541 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 LMBR1LQ6UX01 489 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 ATG9AQ7Z3C6 839 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 PAGR1Q9BTK6 254 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 JADE2Q9NQC1 790 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 DENND2AQ9ULE3 1009 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 PCDHB6Q9Y5E3 794 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 LMO7Q8WWI1 1683 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 KRT86O43790 486 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 HSF2BPO75031 334 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 RASSF9O75901 435 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 ACTN3Q08043 901 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-202ENST00000371196 NAA35Q5VZE5 725 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 ANKRD13DQ6ZTN6 518 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 IQCA1Q86XH1 822 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 DDX60Q8IY21 1712 aaKnown RBP13.04□□□□□ -0.32
CTCFL-202ENST00000371196 OR8K1Q8NGG5 319 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 HDAC7Q8WUI4 952 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 SLC26A6Q9BXS9 759 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 EPN3Q9H201 632 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 CENPHQ9H3R5 247 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 TAB2Q9NYJ8 693 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 DMGDHQ9UI17 866 aaKnown RBP13.04□□□□□ -0.32
CTCFL-202ENST00000371196 CTNND2Q9UQB3 1225 aa13.04□□□□□ -0.32
CTCFL-202ENST00000371196 MST1RQ04912 1400 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 A0A087WZG4 1122 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 GCFC2P16383 781 aaKnown RBP13.03□□□□□ -0.32
CTCFL-202ENST00000371196 ATP2B2Q01814 1243 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 CEP85LQ5SZL2 805 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 KIAA1328Q86T90 577 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 DIS3L2Q8IYB7 885 aaKnown RBP13.03□□□□□ -0.32
CTCFL-202ENST00000371196 GSDMAQ96QA5 445 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 GPR108Q9NPR9 543 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 TMCO5BA8MYB1 307 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 SH2B2O14492 632 aaPredicted RBP13.03□□□□□ -0.32
CTCFL-202ENST00000371196 ZBTB43O43298 467 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 LSP1P33241 339 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 EZH2Q15910 746 aaKnown RBP13.03□□□□□ -0.32
CTCFL-202ENST00000371196 CYB5R4Q7L1T6 521 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 MMGT1Q8N4V1 131 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 SH2D3CQ8N5H7 860 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 TSEN2Q8NCE0 465 aaKnown RBP13.03□□□□□ -0.32
CTCFL-202ENST00000371196 IP6K1Q92551 441 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 PAGE5Q96GU1 130 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 LRRC1Q9BTT6 524 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 SENP2Q9HC62 589 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 MMP1P03956 469 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 IDEP14735 1019 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 CDR1P51861 262 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 EPHB4P54760 987 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 KRT83P78385 493 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 SSRP1Q08945 709 aaKnown RBP13.03□□□□□ -0.32
CTCFL-202ENST00000371196 TTF1Q15361 905 aaPredicted RBP13.03□□□□□ -0.32
CTCFL-202ENST00000371196 KCTD16Q68DU8 428 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 CCDC13Q8IYE1 715 aa13.03□□□□□ -0.32
CTCFL-202ENST00000371196 RGPD8O14715 1765 aaPredicted RBP13.02□□□□□ -0.32
CTCFL-202ENST00000371196 A0A087X0B3 334 aa13.02□□□□□ -0.32
CTCFL-202ENST00000371196 TTC26A0AVF1 554 aa13.02□□□□□ -0.32
CTCFL-202ENST00000371196 ANO9A1A5B4 782 aa13.02□□□□□ -0.32
CTCFL-202ENST00000371196 UBXN1Q04323 297 aa13.02□□□□□ -0.32
CTCFL-202ENST00000371196 SPAG1Q07617 926 aa13.02□□□□□ -0.32
CTCFL-202ENST00000371196 DPYDQ12882 1025 aa13.02□□□□□ -0.32
CTCFL-202ENST00000371196 NNTQ13423 1086 aa13.02□□□□□ -0.32
CTCFL-202ENST00000371196 PLCB4Q15147 1175 aa13.02□□□□□ -0.32
CTCFL-202ENST00000371196 HSP90AB3PQ58FF7 597 aa13.02□□□□□ -0.32
CTCFL-202ENST00000371196 NKX2-3Q8TAU0 364 aa13.02□□□□□ -0.32
CTCFL-202ENST00000371196 ZNF473Q8WTR7 871 aaKnown RBP13.02□□□□□ -0.32
CTCFL-202ENST00000371196 FAXDC2Q96IV6 333 aa13.02□□□□□ -0.32
CTCFL-202ENST00000371196 KCNJ14Q9UNX9 436 aa13.02□□□□□ -0.32
CTCFL-202ENST00000371196 GOLGA8AA7E2F4 631 aa13.02□□□□□ -0.33
CTCFL-202ENST00000371196 TSR1Q2NL82 804 aaKnown RBP13.02□□□□□ -0.33
CTCFL-202ENST00000371196 AMOTQ4VCS5 1084 aa13.02□□□□□ -0.33
CTCFL-202ENST00000371196 NFXL1Q6ZNB6 911 aa13.02□□□□□ -0.33
CTCFL-202ENST00000371196 ZNF662Q6ZS27 426 aa13.02□□□□□ -0.33
CTCFL-202ENST00000371196 SH3RF1Q7Z6J0 888 aa13.02□□□□□ -0.33
CTCFL-202ENST00000371196 RUBCNQ92622 972 aa13.02□□□□□ -0.33
CTCFL-202ENST00000371196 PUS7LQ9H0K6 701 aaKnown RBP13.02□□□□□ -0.33
CTCFL-202ENST00000371196 STRN4Q9NRL3 753 aa13.02□□□□□ -0.33
CTCFL-202ENST00000371196 FAM217BQ9NTX9 383 aaPredicted RBP13.02□□□□□ -0.33
CTCFL-202ENST00000371196 CEP131Q9UPN4 1083 aa13.02□□□□□ -0.33
CTCFL-202ENST00000371196 LUC7L2Q9Y383 392 aaKnown RBP13.02□□□□□ -0.33
CTCFL-202ENST00000371196 ZFYP08048 801 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms