RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 NAV1Q8NEY1 1877 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 USP17L15C9J2P7 530 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 USP17L13C9JLJ4 530 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 USP17L11C9JVI0 530 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 USP17L18D6R9N7 530 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 USP17L22D6RA61 530 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 USP17L17D6RBQ6 530 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 USP17L19D6RCP7 530 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 USP17L20D6RJB6 530 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 PEX10O60683 326 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 TPM2P07951 284 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 MAPK4P31152 587 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 USP17L24Q0WX57 530 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 LCORLQ8N3X6 602 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 ACER1Q8TDN7 264 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 SOCS4Q8WXH5 440 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 GUCD1Q96NT3 240 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 DEFB118Q96PH6 123 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 DNAJC2Q99543 621 aaKnown RBP17.78■□□□□ 0.44
LMO4-201ENST00000370542 RABGAP1Q9Y3P9 1069 aa17.78■□□□□ 0.44
LMO4-201ENST00000370542 POTEB2H3BUK9 544 aa17.77■□□□□ 0.44
LMO4-201ENST00000370542 APBB1O00213 710 aa17.77■□□□□ 0.44
LMO4-201ENST00000370542 CNMDO75829 334 aa17.77■□□□□ 0.44
LMO4-201ENST00000370542 POLR3DP05423 398 aaPredicted RBP17.77■□□□□ 0.44
LMO4-201ENST00000370542 EVX2Q03828 476 aa17.77■□□□□ 0.44
LMO4-201ENST00000370542 UBE3CQ15386 1083 aa17.77■□□□□ 0.44
LMO4-201ENST00000370542 MORN1Q5T089 497 aa17.77■□□□□ 0.44
LMO4-201ENST00000370542 FAM109BQ6ICB4 259 aaPredicted RBP17.77■□□□□ 0.44
LMO4-201ENST00000370542 ANKLE1Q8NAG6 615 aa17.77■□□□□ 0.44
LMO4-201ENST00000370542 TRIB2Q92519 343 aa17.77■□□□□ 0.44
LMO4-201ENST00000370542 NUDT12Q9BQG2 462 aa17.77■□□□□ 0.44
LMO4-201ENST00000370542 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.77■□□□□ 0.443e-6■■■□□ 15.6
LMO4-201ENST00000370542 PORCNQ9H237 461 aa17.77■□□□□ 0.44
LMO4-201ENST00000370542 BOLA2Q9H3K6 86 aa17.77■□□□□ 0.44
LMO4-201ENST00000370542 CABP5Q9NP86 173 aa17.77■□□□□ 0.44
LMO4-201ENST00000370542 ATP8A2Q9NTI2 1148 aa17.77■□□□□ 0.44
LMO4-201ENST00000370542 MCM9Q9NXL9 1143 aa17.77■□□□□ 0.44
LMO4-201ENST00000370542 XRCC6P12956 609 aaKnown RBP eCLIP17.76■□□□□ 0.43
LMO4-201ENST00000370542 VCAM1P19320 739 aa17.76■□□□□ 0.43
LMO4-201ENST00000370542 RAB3GAP1Q15042 981 aa17.76■□□□□ 0.43
LMO4-201ENST00000370542 SDR42E1Q8WUS8 393 aa17.76■□□□□ 0.43
LMO4-201ENST00000370542 LRRCC1Q9C099 1032 aa17.76■□□□□ 0.43
LMO4-201ENST00000370542 A0A1W2PRG0 241 aa17.75■□□□□ 0.43
LMO4-201ENST00000370542 TFRCP02786 760 aaKnown RBP17.75■□□□□ 0.43
LMO4-201ENST00000370542 TRIM32Q13049 653 aa17.75■□□□□ 0.43
LMO4-201ENST00000370542 SEPT2Q15019 361 aa17.75■□□□□ 0.43
LMO4-201ENST00000370542 GPR142Q7Z601 462 aa17.75■□□□□ 0.43
LMO4-201ENST00000370542 TRMT44Q8IYL2 757 aaKnown RBP17.75■□□□□ 0.43
LMO4-201ENST00000370542 NAP1L5Q96NT1 182 aaPredicted RBP17.75■□□□□ 0.43
LMO4-201ENST00000370542 HMX1Q9NP08 348 aaPredicted RBP17.75■□□□□ 0.43
LMO4-201ENST00000370542 SWAP70Q9UH65 585 aa17.75■□□□□ 0.43
LMO4-201ENST00000370542 PRUNE2Q8WUY3 3088 aa17.75■□□□□ 0.43
LMO4-201ENST00000370542 HSP90AA2PQ14568 343 aaPredicted RBP17.74■□□□□ 0.43
LMO4-201ENST00000370542 SLFNL1Q499Z3 407 aa17.74■□□□□ 0.43
LMO4-201ENST00000370542 PLEKHH3Q7Z736 793 aa17.74■□□□□ 0.43
LMO4-201ENST00000370542 SIAH1Q8IUQ4 282 aa17.74■□□□□ 0.43
LMO4-201ENST00000370542 PAWRQ96IZ0 340 aaKnown RBP17.74■□□□□ 0.43
LMO4-201ENST00000370542 FEZ1Q99689 392 aa17.74■□□□□ 0.43
LMO4-201ENST00000370542 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.74■□□□□ 0.43
LMO4-201ENST00000370542 SLKQ9H2G2 1235 aaPredicted RBP17.74■□□□□ 0.43
LMO4-201ENST00000370542 DCTPP1Q9H773 170 aa17.74■□□□□ 0.43
LMO4-201ENST00000370542 ARMT1Q9H993 441 aa17.74■□□□□ 0.43
LMO4-201ENST00000370542 OGDHLQ9ULD0 1010 aa17.74■□□□□ 0.43
LMO4-201ENST00000370542 LAMA2P24043 3122 aaKnown RBP17.74■□□□□ 0.43
LMO4-201ENST00000370542 TTC28Q96AY4 2481 aa17.73■□□□□ 0.43
LMO4-201ENST00000370542 MYH7P12883 1935 aa17.73■□□□□ 0.43
LMO4-201ENST00000370542 RLFQ13129 1914 aa17.73■□□□□ 0.43
LMO4-201ENST00000370542 PRKAB2O43741 272 aa17.73■□□□□ 0.43
LMO4-201ENST00000370542 TRAK2O60296 914 aa17.73■□□□□ 0.43
LMO4-201ENST00000370542 IGHA2P01877 340 aa17.73■□□□□ 0.43
LMO4-201ENST00000370542 CYP2B6P20813 491 aa17.73■□□□□ 0.43
LMO4-201ENST00000370542 MAGEA10P43363 369 aaPredicted RBP17.73■□□□□ 0.43
LMO4-201ENST00000370542 C12orf60Q5U649 245 aa17.73■□□□□ 0.43
LMO4-201ENST00000370542 TMEM179Q6ZVK1 233 aa17.73■□□□□ 0.43
LMO4-201ENST00000370542 HSCBQ8IWL3 235 aa17.73■□□□□ 0.43
LMO4-201ENST00000370542 ZMYND8Q9ULU4 1186 aaPredicted RBP17.73■□□□□ 0.43
LMO4-201ENST00000370542 SPDYE16A6NNV3 312 aaPredicted RBP17.72■□□□□ 0.43
LMO4-201ENST00000370542 MBD4O95243 580 aa17.72■□□□□ 0.43
LMO4-201ENST00000370542 CHGBP05060 677 aa17.72■□□□□ 0.43
LMO4-201ENST00000370542 HOXC6P09630 235 aa17.72■□□□□ 0.43
LMO4-201ENST00000370542 CYP2D6P10635 497 aa17.72■□□□□ 0.43
LMO4-201ENST00000370542 PLA2G5P39877 138 aa17.72■□□□□ 0.43
LMO4-201ENST00000370542 CCNA1P78396 465 aa17.72■□□□□ 0.43
LMO4-201ENST00000370542 ZYXQ15942 572 aaKnown RBP17.72■□□□□ 0.43
LMO4-201ENST00000370542 GBP4Q96PP9 640 aa17.72■□□□□ 0.43
LMO4-201ENST00000370542 PAGR1Q9BTK6 254 aa17.72■□□□□ 0.43
LMO4-201ENST00000370542 BTBD7Q9P203 1132 aa17.72■□□□□ 0.43
LMO4-201ENST00000370542 ALPK3Q96L96 1907 aa17.71■□□□□ 0.43
LMO4-201ENST00000370542 BAZ2AQ9UIF9 1905 aaKnown RBP17.71■□□□□ 0.43
LMO4-201ENST00000370542 PRKAR2AP13861 404 aaKnown RBP17.71■□□□□ 0.43
LMO4-201ENST00000370542 RGS2P41220 211 aa17.71■□□□□ 0.43
LMO4-201ENST00000370542 MAP2K5Q13163 448 aa17.71■□□□□ 0.43
LMO4-201ENST00000370542 NECAB2Q7Z6G3 386 aa17.71■□□□□ 0.43
LMO4-201ENST00000370542 C7orf61Q8IZ16 206 aa17.71■□□□□ 0.43
LMO4-201ENST00000370542 SLC44A5Q8NCS7 719 aa17.71■□□□□ 0.43
LMO4-201ENST00000370542 SNX21Q969T3 373 aa17.71■□□□□ 0.43
LMO4-201ENST00000370542 CCDC17Q96LX7 622 aa17.71■□□□□ 0.43
LMO4-201ENST00000370542 APBA2Q99767 749 aa17.71■□□□□ 0.43
LMO4-201ENST00000370542 RPAP3Q9H6T3 665 aaPredicted RBP17.71■□□□□ 0.43
LMO4-201ENST00000370542 ECHDC1Q9NTX5 307 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms