RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 C19orf81C9J6K1 198 aa11.35□□□□□ -0.59
GTF2B-201ENST00000370500 POLR3DP05423 398 aaPredicted RBP11.35□□□□□ -0.59
GTF2B-201ENST00000370500 MX1P20591 662 aa11.35□□□□□ -0.59
GTF2B-201ENST00000370500 PABPC4Q13310 644 aaKnown RBP eCLIP11.35□□□□□ -0.593e-7■■□□□ 12.7
GTF2B-201ENST00000370500 KIF22Q14807 665 aa11.35□□□□□ -0.59
GTF2B-201ENST00000370500 SMC5Q8IY18 1101 aa11.35□□□□□ -0.59
GTF2B-201ENST00000370500 AMOTL1Q8IY63 956 aa11.35□□□□□ -0.59
GTF2B-201ENST00000370500 TTC13Q8NBP0 860 aa11.35□□□□□ -0.59
GTF2B-201ENST00000370500 ZNF516Q92618 1163 aa11.35□□□□□ -0.59
GTF2B-201ENST00000370500 PARK7Q99497 189 aaKnown RBP11.35□□□□□ -0.59
GTF2B-201ENST00000370500 SUPT16HQ9Y5B9 1047 aaKnown RBP11.35□□□□□ -0.59
GTF2B-201ENST00000370500 TRIM75PA6NK02 468 aa11.34□□□□□ -0.59
GTF2B-201ENST00000370500 RNF113AO15541 343 aaKnown RBP11.34□□□□□ -0.59
GTF2B-201ENST00000370500 SLURP2P0DP57 97 aa11.34□□□□□ -0.59
GTF2B-201ENST00000370500 SPP2Q13103 211 aa11.34□□□□□ -0.59
GTF2B-201ENST00000370500 SH3D19Q5HYK7 790 aa11.34□□□□□ -0.59
GTF2B-201ENST00000370500 GPAT2Q6NUI2 795 aa11.34□□□□□ -0.59
GTF2B-201ENST00000370500 GIMAP6Q6P9H5 292 aa11.34□□□□□ -0.59
GTF2B-201ENST00000370500 PADI6Q6TGC4 694 aa11.34□□□□□ -0.59
GTF2B-201ENST00000370500 C17orf99Q6UX52 265 aa11.34□□□□□ -0.59
GTF2B-201ENST00000370500 LCORLQ8N3X6 602 aa11.34□□□□□ -0.59
GTF2B-201ENST00000370500 DNAJC18Q9H819 358 aa11.34□□□□□ -0.59
GTF2B-201ENST00000370500 EFCC1Q9HA90 598 aa11.34□□□□□ -0.59
GTF2B-201ENST00000370500 DCP1AQ9NPI6 582 aaPredicted RBP11.34□□□□□ -0.59
GTF2B-201ENST00000370500 MCM9Q9NXL9 1143 aa11.34□□□□□ -0.59
GTF2B-201ENST00000370500 STAP2Q9UGK3 403 aa11.34□□□□□ -0.59
GTF2B-201ENST00000370500 SWAP70Q9UH65 585 aa11.34□□□□□ -0.59
GTF2B-201ENST00000370500 AGTPBP1Q9UPW5 1226 aa11.34□□□□□ -0.59
GTF2B-201ENST00000370500 MYO5AQ9Y4I1 1855 aaKnown RBP11.34□□□□□ -0.59
GTF2B-201ENST00000370500 MBD4O95243 580 aa11.33□□□□□ -0.6
GTF2B-201ENST00000370500 GNAT2P19087 354 aa11.33□□□□□ -0.6
GTF2B-201ENST00000370500 PLCD1P51178 756 aa11.33□□□□□ -0.6
GTF2B-201ENST00000370500 PRMT2P55345 433 aa11.33□□□□□ -0.6
GTF2B-201ENST00000370500 BACE1P56817 501 aa11.33□□□□□ -0.6
GTF2B-201ENST00000370500 GABPAQ06546 454 aa11.33□□□□□ -0.6
GTF2B-201ENST00000370500 RRP1BQ14684 758 aaKnown RBP11.33□□□□□ -0.6
GTF2B-201ENST00000370500 CERKLQ49MI3 558 aaPredicted RBP11.33□□□□□ -0.6
GTF2B-201ENST00000370500 SWT1Q5T5J6 900 aaKnown RBP11.33□□□□□ -0.6
GTF2B-201ENST00000370500 OTOP1Q7RTM1 612 aa11.33□□□□□ -0.6
GTF2B-201ENST00000370500 PI4K2BQ8TCG2 481 aa11.33□□□□□ -0.6
GTF2B-201ENST00000370500 APPBP2Q92624 585 aa11.33□□□□□ -0.6
GTF2B-201ENST00000370500 PRR14Q9BWN1 585 aa11.33□□□□□ -0.6
GTF2B-201ENST00000370500 ARMT1Q9H993 441 aa11.33□□□□□ -0.6
GTF2B-201ENST00000370500 CABP5Q9NP86 173 aa11.33□□□□□ -0.6
GTF2B-201ENST00000370500 ZBTB21Q9ULJ3 1066 aa11.33□□□□□ -0.6
GTF2B-201ENST00000370500 TRIM17Q9Y577 477 aa11.33□□□□□ -0.6
GTF2B-201ENST00000370500 FOCADQ5VW36 1801 aa11.33□□□□□ -0.6
GTF2B-201ENST00000370500 SALL3Q9BXA9 1300 aa11.32□□□□□ -0.6
GTF2B-201ENST00000370500 CCDC85CA6NKD9 419 aa11.32□□□□□ -0.6
GTF2B-201ENST00000370500 USP17L10C9JJH3 530 aa11.32□□□□□ -0.6
GTF2B-201ENST00000370500 GADL1Q6ZQY3 521 aa11.32□□□□□ -0.6
GTF2B-201ENST00000370500 EXOC6Q8TAG9 804 aa11.32□□□□□ -0.6
GTF2B-201ENST00000370500 CD99L2Q8TCZ2 262 aa11.32□□□□□ -0.6
GTF2B-201ENST00000370500 SDR42E1Q8WUS8 393 aa11.32□□□□□ -0.6
GTF2B-201ENST00000370500 CCDC17Q96LX7 622 aa11.32□□□□□ -0.6
GTF2B-201ENST00000370500 STRBPQ96SI9 672 aaKnown RBP11.32□□□□□ -0.6
GTF2B-201ENST00000370500 PUS7LQ9H0K6 701 aaKnown RBP11.32□□□□□ -0.6
GTF2B-201ENST00000370500 TMOD4Q9NZQ9 345 aa11.32□□□□□ -0.6
GTF2B-201ENST00000370500 SLC4A4Q9Y6R1 1079 aa11.32□□□□□ -0.6
GTF2B-201ENST00000370500 DOCK1Q14185 1865 aa11.32□□□□□ -0.6
GTF2B-201ENST00000370500 ADGRA2Q96PE1 1338 aa11.31□□□□□ -0.6
GTF2B-201ENST00000370500 HOXD10P28358 340 aa11.31□□□□□ -0.6
GTF2B-201ENST00000370500 LACTBP83111 547 aaPredicted RBP11.31□□□□□ -0.6
GTF2B-201ENST00000370500 ABCB5Q2M3G0 1257 aa11.31□□□□□ -0.6
GTF2B-201ENST00000370500 C12orf60Q5U649 245 aa11.31□□□□□ -0.6
GTF2B-201ENST00000370500 EVI5LQ96CN4 794 aa11.31□□□□□ -0.6
GTF2B-201ENST00000370500 PTPN22Q9Y2R2 807 aa11.31□□□□□ -0.6
GTF2B-201ENST00000370500 USP17L12C9JPN9 530 aa11.3□□□□□ -0.6
GTF2B-201ENST00000370500 USP17L21D6R901 530 aa11.3□□□□□ -0.6
GTF2B-201ENST00000370500 PRKAB2O43741 272 aa11.3□□□□□ -0.6
GTF2B-201ENST00000370500 GH2P01242 217 aa11.3□□□□□ -0.6
GTF2B-201ENST00000370500 BCRP11274 1271 aa11.3□□□□□ -0.6
GTF2B-201ENST00000370500 HOXA7P31268 230 aaPredicted RBP11.3□□□□□ -0.6
GTF2B-201ENST00000370500 SHMT1P34896 483 aa11.3□□□□□ -0.6
GTF2B-201ENST00000370500 GCLCP48506 637 aaPredicted RBP11.3□□□□□ -0.6
GTF2B-201ENST00000370500 USP14P54578 494 aa11.3□□□□□ -0.6
GTF2B-201ENST00000370500 PDE1AP54750 535 aa11.3□□□□□ -0.6
GTF2B-201ENST00000370500 HMGCS2P54868 508 aa11.3□□□□□ -0.6
GTF2B-201ENST00000370500 SBK1Q52WX2 424 aa11.3□□□□□ -0.6
GTF2B-201ENST00000370500 TSHZ3Q63HK5 1081 aa11.3□□□□□ -0.6
GTF2B-201ENST00000370500 CHD1LQ86WJ1 897 aa11.3□□□□□ -0.6
GTF2B-201ENST00000370500 SMCR8Q8TEV9 937 aaPredicted RBP11.3□□□□□ -0.6
GTF2B-201ENST00000370500 OSBP2Q969R2 916 aa11.3□□□□□ -0.6
GTF2B-201ENST00000370500 TMUB1Q9BVT8 246 aa11.3□□□□□ -0.6
GTF2B-201ENST00000370500 NPDC1Q9NQX5 325 aaPredicted RBP11.3□□□□□ -0.6
GTF2B-201ENST00000370500 ARPP21Q9UBL0 812 aaPredicted RBP11.3□□□□□ -0.6
GTF2B-201ENST00000370500 CDK5RAP2Q96SN8 1893 aa11.3□□□□□ -0.6
GTF2B-201ENST00000370500 PATL2C9JE40 543 aaKnown RBP11.29□□□□□ -0.6
GTF2B-201ENST00000370500 LCE2BO14633 110 aa11.29□□□□□ -0.6
GTF2B-201ENST00000370500 GDF11O95390 407 aa11.29□□□□□ -0.6
GTF2B-201ENST00000370500 CYP2C8P10632 490 aa11.29□□□□□ -0.6
GTF2B-201ENST00000370500 RGS19P49795 217 aa11.29□□□□□ -0.6
GTF2B-201ENST00000370500 COPS2P61201 443 aa11.29□□□□□ -0.6
GTF2B-201ENST00000370500 JAG1P78504 1218 aa11.29□□□□□ -0.6
GTF2B-201ENST00000370500 NUCB1Q02818 461 aa11.29□□□□□ -0.6
GTF2B-201ENST00000370500 MTMR2Q13614 643 aa11.29□□□□□ -0.6
GTF2B-201ENST00000370500 SLC4A8Q2Y0W8 1093 aa11.29□□□□□ -0.6
GTF2B-201ENST00000370500 SLFNL1Q499Z3 407 aa11.29□□□□□ -0.6
GTF2B-201ENST00000370500 USP17L2Q6R6M4 530 aa11.29□□□□□ -0.6
GTF2B-201ENST00000370500 TMEM179Q6ZVK1 233 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms