RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 COL5A2P05997 1499 aaPredicted RBP12.33□□□□□ -0.43
LRIF1-201ENST00000369763 STK36Q9NRP7 1315 aa12.33□□□□□ -0.44
LRIF1-201ENST00000369763 PPP1R3GB7ZBB8 358 aa12.33□□□□□ -0.44
LRIF1-201ENST00000369763 ALX1Q15699 326 aa12.33□□□□□ -0.44
LRIF1-201ENST00000369763 JAKMIP3Q5VZ66 844 aa12.33□□□□□ -0.44
LRIF1-201ENST00000369763 APTXQ7Z2E3 356 aaKnown RBP12.33□□□□□ -0.44
LRIF1-201ENST00000369763 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.33□□□□□ -0.44
LRIF1-201ENST00000369763 GLI3P10071 1580 aa12.33□□□□□ -0.44
LRIF1-201ENST00000369763 ANKRD65E5RJM6 399 aa12.33□□□□□ -0.44
LRIF1-201ENST00000369763 EXOC5O00471 708 aa12.33□□□□□ -0.44
LRIF1-201ENST00000369763 MFAP3LO75121 409 aa12.33□□□□□ -0.44
LRIF1-201ENST00000369763 TXLNAP40222 546 aa12.33□□□□□ -0.44
LRIF1-201ENST00000369763 ERVK-24P63145 666 aa12.33□□□□□ -0.44
LRIF1-201ENST00000369763 CCDC152Q4G0S7 254 aa12.33□□□□□ -0.44
LRIF1-201ENST00000369763 KANK3Q6NY19 840 aa12.33□□□□□ -0.44
LRIF1-201ENST00000369763 RASGRP2Q7LDG7 609 aa12.33□□□□□ -0.44
LRIF1-201ENST00000369763 SRBD1Q8N5C6 995 aaKnown RBP12.33□□□□□ -0.44
LRIF1-201ENST00000369763 PCMTD1Q96MG8 357 aaPredicted RBP12.33□□□□□ -0.44
LRIF1-201ENST00000369763 PLEKHA4Q9H4M7 779 aa12.33□□□□□ -0.44
LRIF1-201ENST00000369763 BRMS1Q9HCU9 246 aa12.33□□□□□ -0.44
LRIF1-201ENST00000369763 ADAMTS2O95450 1211 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 TPM1P09493 284 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 TICAM2Q86XR7 235 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 NOA1Q8NC60 698 aaKnown RBP12.32□□□□□ -0.44
LRIF1-201ENST00000369763 NELFBQ8WX92 580 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 UIMC1Q96RL1 719 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 MTRQ99707 1265 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 FUT8Q9BYC5 575 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 ABCB6Q9NP58 842 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 XDHP47989 1333 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 CTAGE9A4FU28 777 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 GOLGA6L9A6NEM1 432 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 FCHSD1Q86WN1 690 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 ZNF512BQ96KM6 892 aaPredicted RBP12.32□□□□□ -0.44
LRIF1-201ENST00000369763 CRKLP46109 303 aaKnown RBP12.32□□□□□ -0.44
LRIF1-201ENST00000369763 FAM193AP78312 1265 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 SEC23AQ15436 765 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 NT5DC1Q5TFE4 455 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 RSRC2Q7L4I2 434 aaKnown RBP12.32□□□□□ -0.44
LRIF1-201ENST00000369763 TMTC2Q8N394 836 aa12.32□□□□□ -0.44
LRIF1-201ENST00000369763 CTCFLQ8NI51 663 aaPredicted RBP12.32□□□□□ -0.44
LRIF1-201ENST00000369763 KIF1AQ12756 1690 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 TSPY2A6NKD2 308 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 TUBB4AP04350 444 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
LRIF1-201ENST00000369763 IL17AQ16552 155 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 SRGAP1Q7Z6B7 1085 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 ZNF34Q8IZ26 560 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 DRC1Q96MC2 740 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 RNF26Q9BY78 433 aaPredicted RBP12.31□□□□□ -0.44
LRIF1-201ENST00000369763 GOLGA8HP0CJ92 632 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 GNAT2P19087 354 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 ERCC5P28715 1186 aaPredicted RBP12.31□□□□□ -0.44
LRIF1-201ENST00000369763 VSNL1P62760 191 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 GSPT2Q8IYD1 628 aaKnown RBP12.31□□□□□ -0.44
LRIF1-201ENST00000369763 RABGGTAQ92696 567 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 PSMB7Q99436 277 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 PHF20Q9BVI0 1012 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 ANKZF1Q9H8Y5 726 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 PRDX5P30044 214 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 TNNT3P45378 269 aaPredicted RBP12.31□□□□□ -0.44
LRIF1-201ENST00000369763 PMS1P54277 932 aaKnown RBP12.31□□□□□ -0.44
LRIF1-201ENST00000369763 TROAPQ12815 778 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 RABEP2Q9H5N1 569 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 ADAM21Q9UKJ8 722 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 ALS2Q96Q42 1657 aa12.31□□□□□ -0.44
LRIF1-201ENST00000369763 ZNF335Q9H4Z2 1342 aaPredicted RBP12.3□□□□□ -0.44
LRIF1-201ENST00000369763 KCNJ18B7U540 433 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 PRCPP42785 496 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 KLK7P49862 253 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 KCNJ12Q14500 433 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 TRIML1Q8N9V2 468 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 IQUBQ8NA54 791 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 HPS3Q969F9 1004 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 CDC23Q9UJX2 597 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 AKAP11Q9UKA4 1901 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 STAT6P42226 847 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 PAK1Q13153 545 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 ZNF579Q8NAF0 562 aaKnown RBP12.3□□□□□ -0.44
LRIF1-201ENST00000369763 BBXQ8WY36 941 aaPredicted RBP12.3□□□□□ -0.44
LRIF1-201ENST00000369763 DYNLL2Q96FJ2 89 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 PANX2Q96RD6 677 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 CALCOCO1Q9P1Z2 691 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 COPB1P53618 953 aaKnown RBP12.3□□□□□ -0.44
LRIF1-201ENST00000369763 PPARDQ03181 441 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 ERFEQ4G0M1 354 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 CTR9Q6PD62 1173 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 STAG2Q8N3U4 1231 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 ZNF384Q8TF68 577 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 VAT1LQ9HCJ6 419 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 ABHD10Q9NUJ1 306 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 FAN1Q9Y2M0 1017 aa12.3□□□□□ -0.44
LRIF1-201ENST00000369763 COL18A1P39060 1754 aa12.29□□□□□ -0.44
LRIF1-201ENST00000369763 DNA2P51530 1060 aa12.29□□□□□ -0.44
LRIF1-201ENST00000369763 CYP27A1Q02318 531 aa12.29□□□□□ -0.44
LRIF1-201ENST00000369763 CNGA4Q8IV77 575 aa12.29□□□□□ -0.44
LRIF1-201ENST00000369763 CELF1Q92879 486 aaKnown RBP12.29□□□□□ -0.44
LRIF1-201ENST00000369763 MCM9Q9NXL9 1143 aa12.29□□□□□ -0.44
LRIF1-201ENST00000369763 STX8Q9UNK0 236 aa12.29□□□□□ -0.44
LRIF1-201ENST00000369763 MACROD2A1Z1Q3 448 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms